Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 3.0e-72 275.0 134 100.0
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 2.2e-62 242.3 134 85.1
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 2.8e-62 241.9 134 84.3
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 7.7e-60 233.8 129 83.7
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 2.8e-54 215.3 134 75.4
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.8e-53 212.6 134 75.4
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 3.1e-53 211.8 130 73.1
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 3.1e-53 211.8 130 73.1
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 3.1e-53 211.8 130 73.1
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 3.1e-53 211.8 132 71.2
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 5.4e-53 211.1 130 73.8
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 5.4e-53 211.1 130 73.1
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 7.0e-53 210.7 130 72.3
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 7.0e-53 210.7 130 73.8
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 7.0e-53 210.7 131 71.0
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 1.6e-52 209.5 130 72.3
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 1.6e-52 209.5 130 71.5
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 1.6e-52 209.5 132 71.2
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 2.7e-52 208.8 132 70.5
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 3.5e-52 208.4 130 70.8
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 3.5e-52 208.4 130 72.3
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 4.5e-52 208.0 131 68.7
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 4.5e-52 208.0 131 68.7
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 4.5e-52 208.0 130 73.1
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 4.5e-52 208.0 130 70.8
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 5.9e-52 207.6 129 71.3
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 5.9e-52 207.6 130 70.8
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 5.9e-52 207.6 130 70.0
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 7.7e-52 207.2 130 70.0
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 7.7e-52 207.2 130 72.3
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 1.0e-51 206.8 131 69.5
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 1.7e-51 206.1 132 70.5
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 2.2e-51 205.7 130 71.5
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 2.9e-51 205.3 130 70.8
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 3.8e-51 204.9 129 70.5
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 3.8e-51 204.9 131 68.7
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 3.8e-51 204.9 130 72.3
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 5.0e-51 204.5 130 70.8
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 5.0e-51 204.5 131 67.9
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 6.5e-51 204.1 129 72.1
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 6.5e-51 204.1 131 67.9
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 6.5e-51 204.1 130 70.8
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 8.5e-51 203.8 131 69.5
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 8.5e-51 203.8 130 71.5
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 1.1e-50 203.4 130 72.3
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 1.1e-50 203.4 130 71.5
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 1.5e-50 203.0 130 70.0
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 1.5e-50 203.0 129 70.5
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 1.9e-50 202.6 131 67.2
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 1.9e-50 202.6 130 69.2
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 1.9e-50 202.6 131 71.0
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 3.2e-50 201.8 129 69.0
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 3.2e-50 201.8 130 69.2
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 5.5e-50 201.1 129 67.4
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 7.2e-50 200.7 132 68.9
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 9.4e-50 200.3 131 67.2
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 2.7e-49 198.7 132 66.7
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 2.7e-49 198.7 131 67.2
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 2.7e-49 198.7 130 70.0
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 4.7e-49 198.0 130 66.9
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 4.7e-49 198.0 130 66.2
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 6.1e-49 197.6 130 68.5
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 6.1e-49 197.6 130 67.7
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 8.0e-49 197.2 130 66.2
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 1.0e-48 196.8 130 67.7
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 1.8e-48 196.1 131 66.4
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 2.3e-48 195.7 130 67.7
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 2.3e-48 195.7 134 63.4
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 3.0e-48 195.3 130 69.2
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 4.0e-48 194.9 132 67.4
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 4.0e-48 194.9 132 67.4
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 8.8e-48 193.7 130 69.2
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 1.2e-47 193.4 130 66.9
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 1.5e-47 193.0 130 66.2
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 2.0e-47 192.6 130 66.9
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 2.6e-47 192.2 132 65.9
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 9.8e-47 190.3 131 63.4
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 1.3e-46 189.9 134 66.4
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 1.3e-46 189.9 173 53.8
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 4.9e-46 188.0 132 68.2
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 8.3e-46 187.2 129 65.9
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 1.8e-45 186.0 131 61.8
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 2.3e-43 179.1 130 62.3
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 1.9e-42 176.0 130 60.8
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 4.2e-42 174.9 115 67.8
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 2.3e-40 169.1 126 63.5
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 2.6e-39 165.6 124 56.5
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 7.5e-39 164.1 133 57.1
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.3e-38 163.3 133 57.1
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 1.3e-38 163.3 133 54.1
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 1.3e-38 163.3 133 54.1
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 2.2e-38 162.5 133 54.9
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 3.7e-38 161.8 133 55.6
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 6.4e-38 161.0 131 56.5
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 1.1e-37 160.2 133 53.4
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 1.1e-37 160.2 133 53.4
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 1.1e-37 160.2 133 53.4
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 1.8e-37 159.5 133 54.9
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 2.4e-37 159.1 130 54.6
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 3.2e-37 158.7 225 39.6
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 2.7e-36 155.6 133 53.4
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 2.3e-35 152.5 133 54.1
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 1.1e-34 150.2 131 53.4
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 5.6e-34 147.9 103 64.1
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 1.6e-33 146.4 129 54.3
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 2.8e-33 145.6 140 50.7
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 6.2e-33 144.4 130 50.0
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 4.0e-32 141.7 153 47.7
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 5.2e-32 141.4 131 51.1
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 1.5e-31 139.8 133 50.4
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 2.6e-31 139.0 82 73.2
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 3.2e-29 132.1 82 69.5
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 4.1e-29 131.7 102 53.9
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 7.0e-29 131.0 80 72.5
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 3.4e-23 112.1 102 52.9
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 1.4e-21 106.7 78 60.3
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 4.1e-21 105.1 64 70.3
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 2.5e-18 95.9 72 66.7
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 2.3e-16 89.4 56 64.3
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 1.2e-12 77.0 59 55.9
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 1.3e-11 73.6 48 66.7
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 1.7e-11 73.2 48 66.7
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 5.1e-11 71.6 56 57.1
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 9.6e-10 67.4 50 60.0
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 1.4e-08 63.5 43 67.4
Cre12.g549500 Chlamydomonas reinhardtii HOM05D006442 ORTHO05D007980 6.4e-06 54.7 60 38.3


User provided reference genes

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