Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 3.7e-56 221.5 126 100.0
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 3.6e-51 204.9 126 91.3
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 6.4e-48 194.1 126 81.7
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 1.2e-46 189.9 126 78.6
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 2.2e-40 169.1 123 76.4
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 1.3e-37 159.8 118 69.5
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 1.3e-37 159.8 115 71.3
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.7e-37 159.5 119 68.9
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 2.3e-37 159.1 112 73.2
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.1e-37 157.9 119 67.2
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.1e-37 157.9 119 67.2
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 1.9e-36 156.0 117 68.4
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 2.5e-36 155.6 119 66.4
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 4.3e-36 154.8 119 66.4
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 5.6e-36 154.5 110 70.9
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 5.6e-36 154.5 110 70.9
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 7.3e-36 154.1 110 71.8
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 1.6e-35 152.9 110 71.8
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.6e-35 152.9 126 65.1
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.6e-35 152.9 126 65.1
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.8e-35 152.1 110 69.1
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 2.8e-35 152.1 110 69.1
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 3.6e-35 151.8 117 67.5
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 4.7e-35 151.4 125 66.4
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 4.7e-35 151.4 113 68.1
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.4e-34 149.8 110 68.2
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 2.3e-34 149.1 112 68.8
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.0e-34 148.3 119 63.9
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 5.2e-34 147.9 118 66.9
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 6.8e-34 147.5 110 70.0
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 6.8e-34 147.5 112 67.9
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 8.9e-34 147.1 116 66.4
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 8.9e-34 147.1 116 66.4
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 8.9e-34 147.1 112 67.9
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 1.5e-33 146.4 111 68.5
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 2.0e-33 146.0 112 67.0
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 2.6e-33 145.6 112 67.0
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 2.6e-33 145.6 112 67.0
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 3.4e-33 145.2 112 66.1
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 3.4e-33 145.2 112 64.3
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 3.4e-33 145.2 112 67.0
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 3.4e-33 145.2 119 62.2
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 4.4e-33 144.8 111 66.7
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 5.8e-33 144.4 119 63.0
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 5.8e-33 144.4 114 66.7
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 5.8e-33 144.4 114 68.4
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 5.8e-33 144.4 112 67.0
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 7.6e-33 144.1 112 67.0
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 9.9e-33 143.7 119 62.2
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 9.9e-33 143.7 109 67.0
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 1.3e-32 143.3 115 63.5
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 1.7e-32 142.9 112 64.3
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 1.7e-32 142.9 112 66.1
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 2.2e-32 142.5 115 64.3
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 2.9e-32 142.1 112 66.1
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 3.7e-32 141.7 110 67.3
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 3.7e-32 141.7 126 60.3
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 3.7e-32 141.7 125 61.6
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 8.4e-32 140.6 111 64.9
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.4e-31 139.8 119 60.5
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 1.9e-31 139.4 116 60.3
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 1.9e-31 139.4 110 66.4
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 4.1e-31 138.3 123 61.8
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 5.4e-31 137.9 114 63.2
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 7.1e-31 137.5 119 58.8
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 7.1e-31 137.5 116 62.1
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 1.2e-30 136.7 113 61.1
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 1.0e-29 133.7 108 62.0
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 3.0e-29 132.1 104 67.3
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 3.0e-29 132.1 110 61.8
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 3.9e-29 131.7 107 60.7
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.1e-29 131.3 95 68.4
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 1.5e-28 129.8 119 62.2
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 1.9e-28 129.4 118 55.9
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.5e-28 129.0 97 69.1
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 2.5e-28 129.0 92 71.7
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 2.1e-27 125.9 124 56.5
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.1e-27 125.9 114 64.0
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 8.1e-27 124.0 92 66.3
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 8.1e-27 124.0 111 65.8
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 8.1e-27 124.0 120 53.3
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 1.8e-26 122.9 113 62.8
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 8.9e-26 120.6 123 61.8
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 3.4e-25 118.6 93 63.4
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 5.8e-25 117.9 92 62.0
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 5.8e-25 117.9 92 64.1
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 9.9e-25 117.1 121 54.5
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 1.3e-24 116.7 90 62.2
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 1.3e-24 116.7 104 53.8
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 2.2e-24 115.9 112 58.0
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.9e-23 112.8 89 64.0
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 3.2e-23 112.1 80 68.8
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 1.2e-22 110.2 123 57.7
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 2.1e-22 109.4 78 71.8
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 1.7e-21 106.3 76 72.4
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 5.1e-21 104.8 92 59.8
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 6.6e-21 104.4 76 69.7
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 1.1e-20 103.6 92 59.8
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 1.9e-20 102.8 85 62.4
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.3e-20 102.1 73 69.9
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 3.3e-20 102.1 73 69.9
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 3.3e-20 102.1 93 65.6
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.3e-19 100.1 75 66.7
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.1e-19 99.4 78 64.1
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.1e-19 99.4 78 64.1
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 6.2e-19 97.8 69 71.0
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 8.1e-19 97.4 85 56.5
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 1.8e-18 96.3 76 61.8
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 2.4e-18 95.9 76 61.8
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 4.0e-18 95.1 77 61.0
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 5.3e-18 94.7 74 62.2
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 6.9e-18 94.4 73 63.0
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 9.0e-18 94.0 71 63.4
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 1.2e-17 93.6 71 63.4
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 1.2e-17 93.6 71 63.4
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 1.5e-17 93.2 107 43.9
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 2.6e-17 92.4 74 60.8
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 2.6e-17 92.4 73 60.3
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 5.8e-17 91.3 71 62.0
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 7.6e-17 90.9 88 60.2
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 9.9e-17 90.5 59 76.3
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 9.9e-17 90.5 59 76.3
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 1.3e-16 90.1 93 48.4
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 9.3e-15 84.0 78 55.1
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 1.0e-13 80.5 77 45.5
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 2.8e-11 72.4 93 39.8
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 2.0e-09 66.2 46 69.6
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 2.9e-08 62.4 44 70.5


User provided reference genes

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