Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 1.2e-222 776.2 386 100.0
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 1.8e-189 666.0 388 85.8
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 7.9e-182 640.6 391 81.1
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 6.7e-173 610.9 387 79.3
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 2.8e-171 605.5 387 77.8
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 6.5e-168 594.3 388 78.9
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 6.5e-168 594.3 393 75.6
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 3.2e-167 592.0 393 76.8
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 2.1e-166 589.3 388 76.0
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 1.0e-165 587.0 399 74.9
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 3.9e-165 585.1 387 76.0
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 3.9e-165 585.1 387 76.0
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 5.1e-165 584.7 388 75.3
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 5.1e-165 584.7 392 75.0
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 8.7e-165 583.9 387 76.5
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 5.7e-164 581.3 390 76.4
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 7.4e-164 580.9 392 75.3
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 1.6e-163 579.7 387 75.2
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 6.3e-163 577.8 387 75.7
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 8.2e-163 577.4 389 74.0
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 3.1e-162 575.5 386 73.3
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 4.1e-162 575.1 386 74.4
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 4.1e-162 575.1 386 74.4
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 5.3e-162 574.7 387 75.2
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 6.9e-162 574.3 387 73.6
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 6.9e-162 574.3 387 73.6
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 9.1e-162 573.9 387 74.2
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 9.1e-162 573.9 387 74.2
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 1.2e-161 573.5 393 72.8
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 1.2e-161 573.5 392 74.2
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.5e-161 573.2 387 74.2
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 1.5e-161 573.2 394 74.9
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.5e-161 573.2 398 72.4
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 2.0e-161 572.8 392 74.5
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 4.5e-161 571.6 398 72.1
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 5.9e-161 571.2 388 76.0
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 5.9e-161 571.2 400 73.2
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 7.7e-161 570.9 387 75.2
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.9e-160 568.9 388 76.3
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 2.9e-160 568.9 395 73.2
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 3.8e-160 568.5 393 73.5
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 3.8e-160 568.5 391 74.4
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 8.5e-160 567.4 399 71.7
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 2.5e-159 565.8 388 73.2
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 7.2e-159 564.3 397 71.8
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 2.3e-157 559.3 376 74.2
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 2.3e-157 559.3 327 81.3
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 5.1e-157 558.1 393 71.8
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 8.8e-157 557.4 390 71.8
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 2.0e-156 556.2 323 81.7
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 9.7e-156 553.9 387 71.6
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 9.7e-156 553.9 390 70.8
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 2.2e-155 552.7 393 71.8
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 2.2e-155 552.7 393 71.8
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 2.8e-155 552.4 389 71.5
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 3.7e-155 552.0 394 71.8
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 3.7e-155 552.0 390 70.8
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 8.2e-155 550.8 389 70.4
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 1.4e-154 550.1 406 70.0
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 6.9e-154 547.7 389 72.0
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 6.9e-154 547.7 384 72.1
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 6.9e-154 547.7 367 73.6
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 9.1e-154 547.4 389 72.0
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 1.5e-153 546.6 387 71.1
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 3.4e-153 545.4 386 72.0
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 3.4e-153 545.4 387 71.8
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 4.5e-153 545.0 367 73.0
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 7.7e-153 544.3 299 86.3
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 1.0e-152 543.9 389 71.5
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 1.7e-152 543.1 396 69.7
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 2.2e-152 542.7 366 74.3
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 3.8e-152 542.0 395 69.9
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 1.1e-151 540.4 386 71.0
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 7.2e-151 537.7 369 72.4
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 2.3e-149 532.7 392 67.1
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 6.7e-149 531.2 440 64.5
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 2.0e-148 529.6 466 60.9
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 1.1e-146 523.9 392 66.3
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 1.8e-146 523.1 327 73.1
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 1.2e-145 520.4 387 69.8
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 5.0e-144 515.0 495 57.4
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 7.2e-143 511.1 396 66.2
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 2.6e-140 502.7 429 62.5
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 3.3e-140 502.3 283 83.0
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 2.8e-139 499.2 386 66.1
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 3.7e-139 498.8 300 79.3
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 3.7e-139 498.8 363 68.6
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 1.1e-138 497.3 386 65.8
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.3e-136 490.3 386 66.3
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 3.8e-136 488.8 394 64.0
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 5.5e-135 485.0 394 63.7
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 3.6e-134 482.3 389 63.8
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 1.0e-133 480.7 403 62.8
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 5.2e-133 478.4 296 75.7
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 8.3e-131 471.1 306 69.9
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 2.3e-125 453.0 312 70.8
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 7.3e-119 431.4 387 62.3
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 8.3e-115 417.9 328 67.1
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 7.5e-108 394.8 228 79.4
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 2.9e-107 392.9 300 61.0
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 4.9e-107 392.1 293 61.8
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 4.7e-102 375.6 319 54.9
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 2.0e-100 370.2 213 78.9
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 2.0e-100 370.2 213 78.9
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 2.0e-100 370.2 213 78.9
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 5.4e-98 362.1 293 55.6
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 8.6e-96 354.8 213 77.5
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 1.2e-94 350.9 217 70.5
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 2.9e-91 339.7 254 67.7
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 3.1e-85 319.7 292 58.6
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 9.9e-84 314.7 287 50.2
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 1.5e-79 300.8 230 65.7
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 2.0e-76 290.4 304 45.4
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 4.6e-73 279.3 177 73.4
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 1.8e-72 277.3 285 46.0
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 2.6e-68 263.5 157 79.6
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 6.4e-67 258.8 278 45.7
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 4.5e-60 236.1 135 85.2
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 1.7e-43 181.0 171 63.2
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 6.1e-41 172.6 162 50.6
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 2.3e-40 170.6 108 72.2
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 4.5e-36 156.4 108 68.5
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 5.2e-32 142.9 114 65.8
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 6.7e-32 142.5 97 67.0
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 1.9e-26 124.4 87 66.7
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 1.5e-23 114.8 64 81.2
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 3.6e-17 93.6 48 85.4
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 3.6e-17 93.6 48 85.4
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 8.0e-09 65.9 111 38.7
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 1.2e-07 62.0 41 65.9


User provided reference genes

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