Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 1.0e-155 553.5 305 100.0
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 3.3e-106 389.0 345 64.9
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 1.1e-88 330.9 210 77.1
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 4.0e-88 328.9 207 76.3
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 1.3e-86 323.9 330 57.3
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 2.2e-86 323.2 185 82.2
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 4.9e-86 322.0 305 56.7
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 8.4e-86 321.2 277 66.8
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 1.1e-85 320.9 180 84.4
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 2.4e-85 319.7 180 85.0
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 4.1e-85 318.9 203 75.4
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 4.1e-85 318.9 203 74.9
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 7.1e-85 318.2 181 83.4
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 1.2e-84 317.4 185 80.5
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 1.2e-84 317.4 208 73.6
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 1.2e-84 317.4 180 83.9
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 2.1e-84 316.6 289 60.6
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 2.7e-84 316.2 307 58.6
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 6.0e-84 315.1 187 78.6
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 6.0e-84 315.1 307 56.4
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 6.0e-84 315.1 209 72.7
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 7.8e-84 314.7 180 82.2
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 1.3e-83 313.9 180 83.3
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 2.3e-83 313.2 182 79.7
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 3.0e-83 312.8 179 81.0
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 3.9e-83 312.4 180 82.8
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 3.9e-83 312.4 209 71.8
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 5.1e-83 312.0 177 83.6
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 5.1e-83 312.0 181 82.3
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 5.1e-83 312.0 180 82.8
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 1.1e-82 310.8 179 82.7
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.9e-82 310.1 189 77.8
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 1.9e-82 310.1 308 55.2
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 2.5e-82 309.7 311 61.7
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 3.3e-82 309.3 177 83.1
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 4.3e-82 308.9 185 78.4
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 5.6e-82 308.5 311 55.6
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 7.3e-82 308.1 313 56.9
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 9.6e-82 307.8 307 57.7
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 9.6e-82 307.8 177 83.1
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 1.2e-81 307.4 181 80.7
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 2.1e-81 306.6 177 80.8
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 2.1e-81 306.6 180 78.3
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 2.8e-81 306.2 183 77.6
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 2.8e-81 306.2 241 65.1
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 4.7e-81 305.4 307 56.4
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 6.2e-81 305.1 182 78.0
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 1.1e-80 304.3 185 79.5
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 1.4e-80 303.9 306 56.5
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 1.4e-80 303.9 306 55.2
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 2.4e-80 303.1 190 75.3
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 4.0e-80 302.4 180 79.4
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 5.2e-80 302.0 181 79.6
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 5.2e-80 302.0 305 56.1
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 4.4e-79 298.9 212 71.2
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 7.6e-79 298.1 185 78.4
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 7.6e-79 298.1 183 74.9
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 9.9e-79 297.7 313 55.9
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 1.3e-78 297.4 187 74.3
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 2.2e-78 296.6 185 74.6
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 3.8e-78 295.8 168 81.5
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 3.8e-78 295.8 179 77.1
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 6.4e-78 295.0 183 75.4
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 1.1e-77 294.3 183 76.5
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 1.1e-77 294.3 183 75.4
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 1.4e-77 293.9 168 82.1
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 1.9e-77 293.5 202 69.3
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.2e-76 290.8 170 82.4
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 1.2e-76 290.8 179 77.7
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 1.6e-76 290.4 185 73.5
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 1.6e-76 290.4 185 73.5
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 2.1e-76 290.0 308 53.6
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 4.6e-76 288.9 169 82.2
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 4.6e-76 288.9 338 51.5
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.7e-75 287.0 341 51.6
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 2.3e-75 286.6 304 53.9
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 1.5e-74 283.9 235 63.8
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 1.5e-74 283.9 356 50.0
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 4.3e-74 282.3 210 65.7
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 4.3e-74 282.3 422 46.4
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 2.8e-73 279.6 180 73.3
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 2.4e-72 276.6 304 51.3
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 2.4e-72 276.6 169 75.1
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 1.1e-69 267.7 233 58.4
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 6.0e-68 261.9 150 82.7
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 1.0e-67 261.2 145 82.8
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 1.3e-65 254.2 180 66.1
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 1.6e-65 253.8 151 78.1
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 2.1e-65 253.4 162 75.9
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 3.1e-64 249.6 201 62.2
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 3.1e-64 249.6 146 80.1
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 3.4e-63 246.1 195 61.5
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 3.2e-61 239.6 220 57.3
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 3.3e-58 229.6 370 39.5
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 6.2e-57 225.3 190 64.7
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 6.9e-56 221.9 313 47.9
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 4.9e-54 215.7 125 81.6
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 7.1e-53 211.8 187 56.1
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 1.6e-52 210.7 175 60.0
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 7.9e-52 208.4 305 46.9
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 8.7e-51 204.9 131 74.8
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 3.3e-50 203.0 154 67.5
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 5.9e-47 192.2 102 86.3
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 3.6e-44 183.0 115 78.3
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 2.2e-41 173.7 137 62.8
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 7.7e-39 165.2 98 80.6
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 2.9e-38 163.3 114 65.8
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 1.5e-34 151.0 145 57.2
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 1.1e-29 134.8 81 77.8
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 3.7e-25 119.8 107 58.9
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 6.5e-22 109.0 99 57.6
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 3.6e-20 103.2 112 50.9
C03p92530 Brassica napus HOM05D006852 ORTHO05D008585 1.7e-14 84.3 62 62.9
Cc02_g28050 Coffea canephora HOM05D006852 ORTHO05D008585 2.4e-08 63.9 57 56.1
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 9.1e-08 62.0 29 96.6
Migut.N01602 Erythranthe guttata HOM05D006852 ORTHO05D008585 2.0e-07 60.8 33 81.8
CDE02G1038 Ceratophyllum demersum HOM05D005011 ORTHO05D006443 5.9e-07 59.3 49 57.1


User provided reference genes

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