Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 2.1e-74 282.3 149 100.0
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 3.4e-32 142.1 136 64.0
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 5.8e-32 141.4 148 60.1
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 4.9e-31 138.3 146 63.0
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 3.2e-30 135.6 143 58.0
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 4.1e-30 135.2 157 53.5
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 9.2e-30 134.0 151 55.6
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 5.1e-28 128.3 150 54.0
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 5.6e-27 124.8 137 56.2
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 1.2e-26 123.6 144 54.9
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 2.8e-26 122.5 140 53.6
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 2.8e-26 122.5 140 55.0
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 6.2e-26 121.3 141 53.2
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 8.1e-26 120.9 138 55.8
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 1.1e-25 120.6 160 47.5
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 2.4e-25 119.4 139 51.8
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 4.0e-25 118.6 155 51.0
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 4.0e-25 118.6 147 51.7
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 1.2e-24 117.1 139 56.8
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 2.0e-24 116.3 146 54.1
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 2.6e-24 115.9 139 54.0
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 4.4e-24 115.2 144 52.1
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 5.8e-24 114.8 144 52.1
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 5.8e-24 114.8 138 54.3
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 7.6e-24 114.4 109 62.4
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 9.9e-24 114.0 136 52.2
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 9.9e-24 114.0 104 55.8
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 1.3e-23 113.6 137 52.6
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 1.7e-23 113.2 138 50.0
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 1.7e-23 113.2 138 50.7
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 2.2e-23 112.8 141 54.6
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 3.8e-23 112.1 140 51.4
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 4.9e-23 111.7 148 48.6
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 4.9e-23 111.7 142 50.7
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 4.9e-23 111.7 146 50.0
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 1.1e-22 110.5 145 51.7
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 1.4e-22 110.2 109 59.6
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 1.9e-22 109.8 135 54.1
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 3.2e-22 109.0 141 50.4
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 4.2e-22 108.6 143 49.7
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 7.1e-22 107.8 102 59.8
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 7.1e-22 107.8 130 57.7
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 9.3e-22 107.5 144 50.7
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 9.3e-22 107.5 133 51.1
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 1.2e-21 107.1 105 59.0
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 2.1e-21 106.3 141 51.8
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 3.5e-21 105.5 150 43.3
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 3.5e-21 105.5 159 48.4
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 4.6e-21 105.1 135 52.6
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 6.0e-21 104.8 97 59.8
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 1.0e-20 104.0 111 56.8
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 1.7e-20 103.2 134 51.5
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 3.9e-20 102.1 103 58.3
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 5.1e-20 101.7 161 47.8
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 6.6e-20 101.3 109 55.0
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 6.6e-20 101.3 109 55.0
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 8.7e-20 100.9 135 54.1
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 1.9e-19 99.8 161 47.2
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 2.5e-19 99.4 143 46.2
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 2.5e-19 99.4 93 58.1
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 3.3e-19 99.0 164 46.3
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 5.6e-19 98.2 96 63.5
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.3e-18 97.1 110 53.6
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.6e-18 96.7 161 46.6
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 2.8e-18 95.9 134 49.3
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 2.8e-18 95.9 101 56.4
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 1.8e-17 93.2 101 55.4
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 1.8e-17 93.2 119 50.4
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 2.4e-17 92.8 118 54.2
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 3.1e-17 92.4 122 48.4
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 1.5e-16 90.1 147 45.6
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 1.5e-16 90.1 101 54.5
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 1.5e-16 90.1 103 54.4
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 1.5e-16 90.1 123 48.8
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 2.6e-16 89.4 184 40.8
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 2.6e-16 89.4 141 44.0
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 3.4e-16 89.0 106 52.8
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 4.5e-16 88.6 147 44.9
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 4.5e-16 88.6 141 45.4
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 5.8e-16 88.2 103 51.5
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 5.8e-16 88.2 111 52.3
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 9.9e-16 87.4 109 47.7
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 1.7e-15 86.7 125 51.2
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 8.4e-15 84.3 160 42.5
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 1.4e-14 83.6 147 44.9
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 2.4e-14 82.8 108 46.3
Ah.10g038830 Amaranthus hybridus HOM05D007629 ORTHO05D009511 2.7e-13 79.3 149 44.3
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 6.0e-13 78.2 190 35.8
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 1.3e-12 77.0 190 35.3
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 1.8e-12 76.6 141 40.4
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 5.1e-12 75.1 78 52.6
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 1.5e-11 73.6 139 41.0
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 1.5e-11 73.6 103 46.6
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 2.5e-11 72.8 109 45.0
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.1e-10 69.7 96 47.9
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.4e-09 67.0 109 44.0
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 9.0e-09 64.3 103 45.6
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 9.0e-09 64.3 123 41.5
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 3.4e-08 62.4 134 36.6
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 5.8e-08 61.6 92 48.9
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 6.4e-07 58.2 108 36.1
HPP92_009584 Vanilla planifolia HOM05D007629 ORTHO05D009511 5.5e-06 55.1 132 34.1


User provided reference genes

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