Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04328 Beta vulgaris HOM05D006916 ORTHO05D008756 7.2e-49 196.8 93 100.0
AUR62023064 Chenopodium quinoa HOM05D006916 ORTHO05D008756 1.3e-26 122.9 92 63.0
AUR62009383 Chenopodium quinoa HOM05D006916 ORTHO05D008756 2.5e-25 118.6 92 59.8
TAR633G2279 Trochodendron aralioides HOM05D006916 ORTHO05D008756 1.2e-22 109.8 90 55.6
TAR633G2378 Trochodendron aralioides HOM05D006916 ORTHO05D008756 1.2e-22 109.8 90 55.6
Manes.07G005900 Manihot esculenta HOM05D006916 ORTHO05D008756 2.0e-22 109.0 78 61.5
Prupe.2G012900 Prunus persica HOM05D006916 ORTHO05D008756 5.8e-22 107.5 84 57.1
Cpa.g.sc640.2 Carica papaya HOM05D006916 ORTHO05D008756 4.9e-21 104.4 90 52.2
Dinv43446 Davidia involucrata HOM05D006916 ORTHO05D008756 4.9e-21 104.4 81 58.0
Duzib268G1492 Durio zibethinus HOM05D006916 ORTHO05D008756 8.4e-21 103.6 92 53.3
Cfa010762 Carpinus fangiana HOM05D006916 ORTHO05D008756 1.1e-20 103.2 77 58.4
Haze_03209 Corylus avellana HOM05D006916 ORTHO05D008756 1.1e-20 103.2 77 58.4
Manes.10G143100 Manihot esculenta HOM05D006916 ORTHO05D008756 1.1e-20 103.2 82 57.3
Nitab4.5_0001186g0060 Nicotiana tabacum HOM05D006916 ORTHO05D008756 1.1e-20 103.2 74 63.5
Gohir.D08G165500 Gossypium hirsutum HOM05D006916 ORTHO05D008756 1.9e-20 102.4 92 52.2
Gorai.004G172600 Gossypium raimondii HOM05D006916 ORTHO05D008756 1.9e-20 102.4 92 52.2
CANSAT80G1950 Cannabis sativa HOM05D006916 ORTHO05D008756 2.4e-20 102.1 82 54.9
FAN01G0033 Fragaria x ananassa HOM05D006916 ORTHO05D008756 3.2e-20 101.7 84 54.8
Potri.001G267200 Populus trichocarpa HOM05D006916 ORTHO05D008756 3.2e-20 101.7 93 51.6
RcHm_v2.0_Chr1g0315961 Rosa chinensis HOM05D006916 ORTHO05D008756 3.2e-20 101.7 84 54.8
Gohir.A08G144500 Gossypium hirsutum HOM05D006916 ORTHO05D008756 4.1e-20 101.3 92 51.1
Nn7g36196 Nelumbo nucifera HOM05D006916 ORTHO05D008756 4.1e-20 101.3 81 59.3
Potri.009G061300 Populus trichocarpa HOM05D006916 ORTHO05D008756 4.1e-20 101.3 78 61.5
Sabra09G0045200 Salix brachista HOM05D006916 ORTHO05D008756 5.4e-20 100.9 78 61.5
MSTRG.17032 Avicennia marina HOM05D006916 ORTHO05D008756 7.1e-20 100.5 74 62.2
MD02G1312000 Malus domestica HOM05D006916 ORTHO05D008756 9.2e-20 100.1 84 53.6
QL04p006637 Quercus lobata HOM05D006916 ORTHO05D008756 1.2e-19 99.8 76 60.5
Solyc01g087140.4 Solanum lycopersicum HOM05D006916 ORTHO05D008756 1.2e-19 99.8 75 62.7
SalBow5G3761 Salvia bowleyana HOM05D006916 ORTHO05D008756 1.6e-19 99.4 75 60.0
SalBow5G3790 Salvia bowleyana HOM05D006916 ORTHO05D008756 1.6e-19 99.4 75 60.0
FvH4_7g01030 Fragaria vesca HOM05D006916 ORTHO05D008756 2.1e-19 99.0 84 52.4
FAN06G2642 Fragaria x ananassa HOM05D006916 ORTHO05D008756 2.1e-19 99.0 84 52.4
CiPaw.13G004800 Carya illinoinensis HOM05D006916 ORTHO05D008756 2.7e-19 98.6 77 58.4
Ca_14513_v3 Cicer arietinum L. HOM05D006916 ORTHO05D008756 2.7e-19 98.6 77 53.2
Nitab4.5_0000634g0200 Nicotiana tabacum HOM05D006916 ORTHO05D008756 2.7e-19 98.6 74 62.2
Thecc.01G411100 Theobroma cacao HOM05D006916 ORTHO05D008756 2.7e-19 98.6 81 54.3
Lj3g0001567 Lotus japonicus HOM05D006916 ORTHO05D008756 3.5e-19 98.2 77 55.8
PGSC0003DMG400006867 Solanum tuberosum HOM05D006916 ORTHO05D008756 3.5e-19 98.2 75 61.3
Duzib138G0699 Durio zibethinus HOM05D006916 ORTHO05D008756 4.6e-19 97.8 78 56.4
FAN03G0110 Fragaria x ananassa HOM05D006916 ORTHO05D008756 4.6e-19 97.8 84 52.4
MD07G1010600 Malus domestica HOM05D006916 ORTHO05D008756 4.6e-19 97.8 84 51.2
Sc11g0009180 Simmondsia chinensis HOM05D006916 ORTHO05D008756 4.6e-19 97.8 89 50.6
arahy.Tifrunner.gnm1.ann1.5BB2HR Arachis hypogaea HOM05D006916 ORTHO05D008756 6.0e-19 97.4 74 56.8
arahy.Tifrunner.gnm1.ann1.P93ESD Arachis hypogaea HOM05D006916 ORTHO05D008756 6.0e-19 97.4 74 56.8
Ciclev10031819m.g Citrus clementina HOM05D006916 ORTHO05D008756 6.0e-19 97.4 90 47.8
Sopen01g034200 Solanum pennellii HOM05D006916 ORTHO05D008756 6.0e-19 97.4 75 61.3
SGA_v2.0_scaffold119G32732 Striga asiatica HOM05D006916 ORTHO05D008756 6.0e-19 97.4 75 57.3
Peaxi162Scf00428g00116 Petunia axillaris HOM05D006916 ORTHO05D008756 7.8e-19 97.1 76 59.2
Actinidia19391 Actinidia chinensis HOM05D006916 ORTHO05D008756 1.7e-18 95.9 81 54.3
Dinv09357 Davidia involucrata HOM05D006916 ORTHO05D008756 1.7e-18 95.9 81 53.1
Phvul.005G021800 Phaseolus vulgaris HOM05D006916 ORTHO05D008756 1.7e-18 95.9 74 59.5
Atru.chr11.2661 Acer truncatum HOM05D000807 ORTHO05D000662 2.3e-18 95.5 87 48.3
TPR.G14555 Trifolium pratense HOM05D006916 ORTHO05D008756 3.9e-18 94.7 77 51.9
PSO384G3304 Papaver somniferum HOM05D006916 ORTHO05D008756 5.1e-18 94.4 80 52.5
Medtr3g033530 Medicago truncatula HOM05D006916 ORTHO05D008756 6.6e-18 94.0 75 54.7
VMungo1080G1111 Vigna mungo HOM05D006916 ORTHO05D008756 6.6e-18 94.0 74 58.1
Migut.B01296 Erythranthe guttata HOM05D006916 ORTHO05D008756 8.6e-18 93.6 75 57.3
Glyma.15G274400 Glycine max HOM05D006916 ORTHO05D008756 8.6e-18 93.6 77 55.8
Migut.M00475 Erythranthe guttata HOM05D006916 ORTHO05D008756 1.1e-17 93.2 75 57.3
Ciclev10032915m.g Citrus clementina HOM05D006916 ORTHO05D008756 1.5e-17 92.8 77 54.5
GSVIVG01032090001 Vitis vinifera HOM05D006916 ORTHO05D008756 1.5e-17 92.8 83 50.6
CSS0007374 Camellia sinensis var. sinensis HOM05D006916 ORTHO05D008756 2.5e-17 92.0 92 48.9
PSO339G1248 Papaver somniferum HOM05D006916 ORTHO05D008756 3.3e-17 91.7 80 51.2
Psat5g212080 Pisum sativum HOM05D006916 ORTHO05D008756 3.3e-17 91.7 74 52.7
Lalb_Chr20g0108041 Lupinus albus HOM05D006916 ORTHO05D008756 9.6e-17 90.1 77 50.6
COL.COLO4_04852 Corchorus olitorius HOM05D006916 ORTHO05D008756 1.6e-16 89.4 94 50.0
DCAR_022403 Daucus carota HOM05D006916 ORTHO05D008756 1.6e-16 89.4 75 56.0
Actinidia31062 Actinidia chinensis HOM05D006916 ORTHO05D008756 2.1e-16 89.0 76 55.3
CSS0039404 Camellia sinensis var. sinensis HOM05D006916 ORTHO05D008756 2.1e-16 89.0 76 55.3
MBI01_g18883_MAGBIO Magnolia biondii HOM05D006916 ORTHO05D008756 1.1e-15 86.7 89 43.8
Cc02_g27940 Coffea canephora HOM05D006916 ORTHO05D008756 2.4e-15 85.5 88 44.3
TWI73G0045 Tripterygium wilfordii HOM05D006916 ORTHO05D008756 5.2e-15 84.3 78 48.7
MELO3C023975.2 Cucumis melo HOM05D006916 ORTHO05D008756 1.7e-13 79.3 74 52.7
Sed0016369 Sechium edule HOM05D006916 ORTHO05D008756 2.9e-13 78.6 75 50.7
vmacro13665 Vaccinium macrocarpon HOM05D006916 ORTHO05D008756 2.9e-13 78.6 80 45.0
Aqoxy1G00267 Aquilegia oxysepala HOM05D006916 ORTHO05D008756 8.4e-13 77.0 77 46.8
CsaV3_3G032160 Cucumis sativus L. HOM05D006916 ORTHO05D008756 1.1e-12 76.6 74 51.4
PGR044G2091 Punica granatum HOM05D006916 ORTHO05D008756 4.2e-12 74.7 90 40.0
ECA248G0998 Erigeron canadensis HOM05D006916 ORTHO05D008756 5.4e-12 74.3 77 41.6
Sp3g06960 Schrenkiella parvula HOM05D006916 ORTHO05D008756 7.1e-12 73.9 80 45.0
ClCG10G012380 Citrullus lanatus HOM05D006916 ORTHO05D008756 9.3e-12 73.6 75 46.7
BcaB04g21256 Brassica carinata HOM05D006916 ORTHO05D008756 1.2e-11 73.2 81 44.4
Thhalv10022398m.g Eutrema salsugineum HOM05D006916 ORTHO05D008756 1.2e-11 73.2 89 39.3
HanXRQChr01g0016271 Helianthus annuus HOM05D006916 ORTHO05D008756 2.1e-11 72.4 77 40.3
Hund16628 Selenicereus undatus HOM05D006916 ORTHO05D008756 2.7e-11 72.0 94 43.6
Carub.0003s0763 Capsella rubella HOM05D006916 ORTHO05D008756 3.5e-11 71.6 72 44.4
CARHR082790 Cardamine hirsuta HOM05D006916 ORTHO05D008756 4.6e-11 71.2 72 45.8
Eucgr.J01277 Eucalyptus grandis HOM05D006916 ORTHO05D008756 4.6e-11 71.2 78 46.2
BcaC05g29589 Brassica carinata HOM05D006916 ORTHO05D008756 1.7e-10 69.3 74 43.2
HPP92_026854 Vanilla planifolia HOM05D006916 ORTHO05D008756 1.7e-10 69.3 89 37.1
A05p40250 Brassica napus HOM05D006916 ORTHO05D008756 1.1e-09 66.6 74 41.9
C05p59330 Brassica napus HOM05D006916 ORTHO05D008756 1.1e-09 66.6 74 41.9
BolC5t34565H Brassica oleracea HOM05D006916 ORTHO05D008756 1.1e-09 66.6 74 41.9
THA.LOC104819073 Tarenaya hassleriana HOM05D006916 ORTHO05D008756 2.5e-09 65.5 72 45.8
BcaC09g47975 Brassica carinata HOM05D006916 ORTHO05D008756 5.6e-09 64.3 68 45.6
BraA01t04344Z Brassica rapa HOM05D006916 ORTHO05D008756 1.6e-08 62.8 81 39.5
Rhsim07G0055500 Rhododendron simsii HOM05D006916 ORTHO05D008756 2.8e-08 62.0 64 43.8
AT3G08490 Arabidopsis thaliana HOM05D006916 ORTHO05D008756 6.2e-08 60.8 78 39.7
Zm00001eb008770 Zea mays HOM05D006916 ORTHO05D008756 1.2e-06 56.6 74 32.4
Os03g0216500 Oryza sativa ssp. japonica HOM05D006916 ORTHO05D008756 2.6e-06 55.5 81 30.9


User provided reference genes

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