Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04327 Beta vulgaris HOM05D006916 ORTHO05D008756 1.6e-58 229.2 114 100.0
AUR62023064 Chenopodium quinoa HOM05D006916 ORTHO05D008756 2.1e-18 95.9 63 69.8
AUR62009383 Chenopodium quinoa HOM05D006916 ORTHO05D008756 6.2e-18 94.4 64 65.6
Hund16628 Selenicereus undatus HOM05D006916 ORTHO05D008756 4.5e-16 88.2 65 64.6
Peaxi162Scf00428g00116 Petunia axillaris HOM05D006916 ORTHO05D008756 5.1e-12 74.7 64 50.0
Nitab4.5_0000634g0200 Nicotiana tabacum HOM05D006916 ORTHO05D008756 6.7e-12 74.3 65 50.8
Eucgr.J01277 Eucalyptus grandis HOM05D006916 ORTHO05D008756 2.5e-11 72.4 64 48.4
PGSC0003DMG400006867 Solanum tuberosum HOM05D006916 ORTHO05D008756 2.5e-11 72.4 64 51.6
Sc11g0009180 Simmondsia chinensis HOM05D006916 ORTHO05D008756 7.4e-11 70.9 61 52.5
Duzib138G0699 Durio zibethinus HOM05D006916 ORTHO05D008756 9.6e-11 70.5 63 50.8
Solyc01g087140.4 Solanum lycopersicum HOM05D006916 ORTHO05D008756 1.3e-10 70.1 61 52.5
PGR044G2091 Punica granatum HOM05D006916 ORTHO05D008756 2.1e-10 69.3 64 45.3
Sopen01g034200 Solanum pennellii HOM05D006916 ORTHO05D008756 2.1e-10 69.3 61 52.5
CiPaw.13G004800 Carya illinoinensis HOM05D006916 ORTHO05D008756 2.8e-10 68.9 63 49.2
Manes.07G005900 Manihot esculenta HOM05D006916 ORTHO05D008756 2.8e-10 68.9 59 50.8
Thecc.01G411100 Theobroma cacao HOM05D006916 ORTHO05D008756 3.6e-10 68.6 64 45.3
Nitab4.5_0001186g0060 Nicotiana tabacum HOM05D006916 ORTHO05D008756 8.1e-10 67.4 61 49.2
Actinidia31062 Actinidia chinensis HOM05D006916 ORTHO05D008756 1.1e-09 67.0 63 47.6
Gohir.A08G144500 Gossypium hirsutum HOM05D006916 ORTHO05D008756 1.1e-09 67.0 63 44.4
Gohir.D08G165500 Gossypium hirsutum HOM05D006916 ORTHO05D008756 1.1e-09 67.0 63 44.4
Gorai.004G172600 Gossypium raimondii HOM05D006916 ORTHO05D008756 1.1e-09 67.0 63 44.4
Ciclev10031819m.g Citrus clementina HOM05D006916 ORTHO05D008756 2.4e-09 65.9 63 47.6
Manes.10G143100 Manihot esculenta HOM05D006916 ORTHO05D008756 3.1e-09 65.5 64 42.2
MSTRG.17032 Avicennia marina HOM05D006916 ORTHO05D008756 5.3e-09 64.7 64 42.2
Ciclev10032915m.g Citrus clementina HOM05D006916 ORTHO05D008756 5.3e-09 64.7 63 47.6
Os03g0216500 Oryza sativa ssp. japonica HOM05D006916 ORTHO05D008756 5.3e-09 64.7 77 40.3
Sabra09G0045200 Salix brachista HOM05D006916 ORTHO05D008756 5.3e-09 64.7 64 42.2
SGA_v2.0_scaffold119G32732 Striga asiatica HOM05D006916 ORTHO05D008756 5.3e-09 64.7 64 46.9
GSVIVG01032090001 Vitis vinifera HOM05D006916 ORTHO05D008756 5.3e-09 64.7 63 47.6
Psat5g212080 Pisum sativum HOM05D006916 ORTHO05D008756 6.9e-09 64.3 63 44.4
Atru.chr11.2661 Acer truncatum HOM05D000807 ORTHO05D000662 9.0e-09 63.9 63 46.0
Actinidia19391 Actinidia chinensis HOM05D006916 ORTHO05D008756 9.0e-09 63.9 63 44.4
FAN01G0033 Fragaria x ananassa HOM05D006916 ORTHO05D008756 9.0e-09 63.9 63 46.0
FAN03G0110 Fragaria x ananassa HOM05D006916 ORTHO05D008756 9.0e-09 63.9 63 46.0
FAN06G2642 Fragaria x ananassa HOM05D006916 ORTHO05D008756 9.0e-09 63.9 63 46.0
MD02G1312000 Malus domestica HOM05D006916 ORTHO05D008756 9.0e-09 63.9 63 46.0
THA.LOC104819073 Tarenaya hassleriana HOM05D006916 ORTHO05D008756 9.0e-09 63.9 80 41.2
TAR633G2279 Trochodendron aralioides HOM05D006916 ORTHO05D008756 1.5e-08 63.2 67 43.3
TAR633G2378 Trochodendron aralioides HOM05D006916 ORTHO05D008756 1.5e-08 63.2 67 43.3
vmacro13665 Vaccinium macrocarpon HOM05D006916 ORTHO05D008756 1.5e-08 63.2 88 36.4
Prupe.2G012900 Prunus persica HOM05D006916 ORTHO05D008756 2.6e-08 62.4 63 44.4
SalBow5G3790 Salvia bowleyana HOM05D006916 ORTHO05D008756 2.6e-08 62.4 65 41.5
VMungo1080G1111 Vigna mungo HOM05D006916 ORTHO05D008756 2.6e-08 62.4 63 42.9
Lalb_Chr20g0108041 Lupinus albus HOM05D006916 ORTHO05D008756 3.4e-08 62.0 63 42.9
Ca_14513_v3 Cicer arietinum L. HOM05D006916 ORTHO05D008756 4.5e-08 61.6 63 42.9
Cc02_g27940 Coffea canephora HOM05D006916 ORTHO05D008756 4.5e-08 61.6 64 40.6
Dinv43446 Davidia involucrata HOM05D006916 ORTHO05D008756 4.5e-08 61.6 63 42.9
Migut.B01296 Erythranthe guttata HOM05D006916 ORTHO05D008756 4.5e-08 61.6 60 45.0
Phvul.005G021800 Phaseolus vulgaris HOM05D006916 ORTHO05D008756 4.5e-08 61.6 63 44.4
SalBow5G3761 Salvia bowleyana HOM05D006916 ORTHO05D008756 4.5e-08 61.6 65 40.0
TPR.G14555 Trifolium pratense HOM05D006916 ORTHO05D008756 4.5e-08 61.6 63 41.3
HPP92_026854 Vanilla planifolia HOM05D006916 ORTHO05D008756 4.5e-08 61.6 55 50.9
CANSAT80G1950 Cannabis sativa HOM05D006916 ORTHO05D008756 5.8e-08 61.2 63 47.6
Cfa010762 Carpinus fangiana HOM05D006916 ORTHO05D008756 5.8e-08 61.2 63 42.9
Dinv09357 Davidia involucrata HOM05D006916 ORTHO05D008756 5.8e-08 61.2 63 41.3
Glyma.15G274400 Glycine max HOM05D006916 ORTHO05D008756 5.8e-08 61.2 63 44.4
Lj3g0001567 Lotus japonicus HOM05D006916 ORTHO05D008756 5.8e-08 61.2 63 42.9
RcHm_v2.0_Chr1g0315961 Rosa chinensis HOM05D006916 ORTHO05D008756 5.8e-08 61.2 63 44.4
BcaC09g47975 Brassica carinata HOM05D006916 ORTHO05D008756 7.6e-08 60.8 64 50.0
Thhalv10022398m.g Eutrema salsugineum HOM05D006916 ORTHO05D008756 7.6e-08 60.8 64 48.4
Duzib268G1492 Durio zibethinus HOM05D006916 ORTHO05D008756 9.9e-08 60.5 63 44.4
BolC1t05505H Brassica oleracea HOM05D006916 ORTHO05D008756 1.3e-07 60.1 69 47.8
Migut.M00564 Erythranthe guttata HOM05D006916 ORTHO05D008756 1.3e-07 60.1 63 42.9
Migut.O00691 Erythranthe guttata HOM05D006916 ORTHO05D008756 1.3e-07 60.1 63 42.9
Migut.O00900 Erythranthe guttata HOM05D006916 ORTHO05D008756 1.3e-07 60.1 63 42.9
FvH4_7g01030 Fragaria vesca HOM05D006916 ORTHO05D008756 1.3e-07 60.1 56 46.4
Haze_03209 Corylus avellana HOM05D006916 ORTHO05D008756 1.7e-07 59.7 63 41.3
MD07G1010600 Malus domestica HOM05D006916 ORTHO05D008756 1.7e-07 59.7 63 44.4
Medtr3g033530 Medicago truncatula HOM05D006916 ORTHO05D008756 1.7e-07 59.7 62 41.9
Potri.009G061300 Populus trichocarpa HOM05D006916 ORTHO05D008756 2.2e-07 59.3 64 39.1
arahy.Tifrunner.gnm1.ann1.5BB2HR Arachis hypogaea HOM05D006916 ORTHO05D008756 2.9e-07 58.9 64 40.6
Carub.0003s0763 Capsella rubella HOM05D006916 ORTHO05D008756 2.9e-07 58.9 65 47.7
CARHR082790 Cardamine hirsuta HOM05D006916 ORTHO05D008756 2.9e-07 58.9 56 48.2
Migut.M00475 Erythranthe guttata HOM05D006916 ORTHO05D008756 2.9e-07 58.9 62 41.9
CSS0007374 Camellia sinensis var. sinensis HOM05D006916 ORTHO05D008756 3.8e-07 58.5 63 39.7
CSS0039404 Camellia sinensis var. sinensis HOM05D006916 ORTHO05D008756 3.8e-07 58.5 63 39.7
PSO339G1248 Papaver somniferum HOM05D006916 ORTHO05D008756 3.8e-07 58.5 61 45.9
QL04p006637 Quercus lobata HOM05D006916 ORTHO05D008756 3.8e-07 58.5 63 41.3
Sp3g06960 Schrenkiella parvula HOM05D006916 ORTHO05D008756 3.8e-07 58.5 66 45.5
TWI73G0045 Tripterygium wilfordii HOM05D006916 ORTHO05D008756 3.8e-07 58.5 56 46.4
PSO384G3304 Papaver somniferum HOM05D006916 ORTHO05D008756 4.9e-07 58.2 63 44.4
Rhsim07G0055500 Rhododendron simsii HOM05D006916 ORTHO05D008756 4.9e-07 58.2 63 42.9
arahy.Tifrunner.gnm1.ann1.P93ESD Arachis hypogaea HOM05D006916 ORTHO05D008756 6.4e-07 57.8 64 39.1
Potri.001G267200 Populus trichocarpa HOM05D006916 ORTHO05D008756 8.4e-07 57.4 64 40.6
BcaB04g21256 Brassica carinata HOM05D006916 ORTHO05D008756 1.1e-06 57.0 64 46.9
MELO3C023975.2 Cucumis melo HOM05D006916 ORTHO05D008756 1.1e-06 57.0 64 37.5
CsaV3_3G032160 Cucumis sativus L. HOM05D006916 ORTHO05D008756 1.1e-06 57.0 64 37.5
AT3G08490 Arabidopsis thaliana HOM05D006916 ORTHO05D008756 1.4e-06 56.6 63 49.2
Cpa.g.sc640.2 Carica papaya HOM05D006916 ORTHO05D008756 1.4e-06 56.6 63 38.1
BraA01t04344Z Brassica rapa HOM05D006916 ORTHO05D008756 1.9e-06 56.2 83 34.9
Nn7g36196 Nelumbo nucifera HOM05D006916 ORTHO05D008756 1.9e-06 56.2 64 40.6
Sed0016369 Sechium edule HOM05D006916 ORTHO05D008756 2.4e-06 55.8 64 37.5
Aqoxy1G00267 Aquilegia oxysepala HOM05D006916 ORTHO05D008756 3.2e-06 55.5 58 41.4
BcaC05g29589 Brassica carinata HOM05D006916 ORTHO05D008756 3.2e-06 55.5 65 44.6
Sc11g0009190 Simmondsia chinensis HOM05D006916 ORTHO05D008756 4.2e-06 55.1 65 38.5
DCAR_022403 Daucus carota HOM05D006916 ORTHO05D008756 5.5e-06 54.7 59 40.7
Zm00001eb008770 Zea mays HOM05D006916 ORTHO05D008756 7.1e-06 54.3 63 41.3
ECA248G0998 Erigeron canadensis HOM05D006916 ORTHO05D008756 9.3e-06 53.9 63 39.7


User provided reference genes

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