Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04324 Beta vulgaris HOM05D010975 ORTHO05D010903 0.0e+00 1116.3 604 100.0
EL10Ac2g04322 Beta vulgaris HOM05D010975 ORTHO05D010903 6.8e-281 970.3 543 96.9
AUR62034275 Chenopodium quinoa HOM05D010975 ORTHO05D010903 3.2e-105 386.7 263 74.9
AUR62034277 Chenopodium quinoa HOM05D010975 ORTHO05D010903 9.3e-105 385.2 561 50.4
Psat4g183920 Pisum sativum HOM05D010975 ORTHO05D010903 1.4e-79 301.6 405 43.5
TPR.G16670 Trifolium pratense HOM05D006122 ORTHO05D007426 2.3e-71 274.2 388 42.3
Psat0s3719g0240 Pisum sativum HOM05D010975 ORTHO05D010903 3.0e-63 247.3 404 39.6
TPR.G22874 Trifolium pratense HOM05D010975 ORTHO05D010903 5.4e-52 209.9 296 41.2
EL10Ac4g09371 Beta vulgaris HOM05D010975 ORTHO05D010903 1.7e-37 161.8 418 30.6
EL10Ac8g19025 Beta vulgaris HOM05D010975 ORTHO05D010903 3.0e-34 151.0 414 29.2
EL10Ac8g19026 Beta vulgaris HOM05D010975 ORTHO05D010903 8.6e-34 149.4 418 29.7
DCAR_010389 Daucus carota HOM05D025501 ORTHO05D010903 8.1e-32 142.9 315 34.6
Psat0s3719g0280 Pisum sativum HOM05D010975 ORTHO05D010903 2.0e-30 138.3 175 45.7
EL10Ac4g09372 Beta vulgaris HOM05D010975 ORTHO05D010903 3.4e-30 137.5 345 31.0
DCAR_011104 Daucus carota HOM05D010975 ORTHO05D010903 5.4e-28 130.2 314 30.9
AUR62025883 Chenopodium quinoa HOM05D010975 ORTHO05D010903 6.0e-27 126.7 253 35.6
EL10Ac4g09643 Beta vulgaris HOM05D013081 ORTHO05D010903 2.3e-26 124.8 405 27.7
EL10Ac5g12667 Beta vulgaris HOM05D013081 ORTHO05D010903 5.1e-26 123.6 405 27.4
DCAR_017628 Daucus carota HOM05D010975 ORTHO05D010903 1.1e-25 122.5 232 36.2
DCAR_010390 Daucus carota HOM05D025501 ORTHO05D010903 1.8e-23 115.2 228 37.3
AUR62025886 Chenopodium quinoa HOM05D010975 ORTHO05D010903 6.8e-23 113.2 196 37.2
Psat0s3719g0080 Pisum sativum HOM05D015964 ORTHO05D010903 1.7e-21 108.6 270 32.6
Psat0s3719g0160 Pisum sativum HOM05D015964 ORTHO05D010903 9.3e-20 102.8 165 39.4
AUR62025887 Chenopodium quinoa HOM05D013081 ORTHO05D010903 2.3e-18 98.2 356 27.2
EL10Ac9g21162 Beta vulgaris HOM05D013081 ORTHO05D010903 1.3e-16 92.4 357 27.5
Lj1g0007467 Lotus japonicus HOM05D015964 ORTHO05D010903 4.8e-16 90.5 126 38.9
TPR.G9385 Trifolium pratense HOM05D015964 ORTHO05D010903 1.1e-15 89.4 227 29.5
SalBow6G7226 Salvia bowleyana HOM05D010975 ORTHO05D010903 6.9e-15 86.7 296 26.4
TPR.G40488 Trifolium pratense HOM05D015964 ORTHO05D010903 5.8e-14 83.6 98 41.8
Cc03_g15950 Coffea canephora HOM05D000176 ORTHO05D003511 1.4e-12 79.0 380 23.4
Psat4g206520 Pisum sativum HOM05D015964 ORTHO05D015958 1.9e-12 78.6 190 33.7
TPR.G34910 Trifolium pratense HOM05D015947 ORTHO05D013665 4.2e-12 77.4 365 24.4
DCAR_010384 Daucus carota HOM05D025501 ORTHO05D010903 2.7e-11 74.7 129 39.5
MD10G1009900 Malus domestica HOM05D000176 ORTHO05D000106 3.5e-11 74.3 356 25.3
FvH4_3g28611 Fragaria vesca HOM05D000176 ORTHO05D000106 6.0e-11 73.6 331 22.4
Prupe.4G252400 Prunus persica HOM05D000176 ORTHO05D000106 6.0e-11 73.6 332 24.1
Nitab4.5_0000381g0110 Nicotiana tabacum HOM05D000176 ORTHO05D000106 1.7e-10 72.0 277 23.5
SalBow6G5927 Salvia bowleyana HOM05D010975 ORTHO05D010903 1.7e-10 72.0 132 32.6
RcHm_v2.0_Chr5g0052481 Rosa chinensis HOM05D000176 ORTHO05D000106 3.0e-10 71.2 326 23.9
PSO675G7301 Papaver somniferum HOM05D000176 ORTHO05D000106 3.9e-10 70.9 299 24.1
Prupe.8G014000 Prunus persica HOM05D000176 ORTHO05D000106 3.9e-10 70.9 341 23.8
Solyc12g006100.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.9e-10 70.9 340 23.8
FvH4_6g33711 Fragaria vesca HOM05D000176 ORTHO05D000106 5.1e-10 70.5 314 23.2
Sopen12g002060 Solanum pennellii HOM05D000176 ORTHO05D003511 5.1e-10 70.5 340 23.5
TWI09G0140 Tripterygium wilfordii HOM05D000874 ORTHO05D001049 5.1e-10 70.5 306 24.2
RcHm_v2.0_Chr2g0143601 Rosa chinensis HOM05D000176 ORTHO05D000106 8.7e-10 69.7 314 23.2
PGR004G2764 Punica granatum HOM05D000176 ORTHO05D000106 1.5e-09 68.9 130 26.9
TWI53G0034 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 1.9e-09 68.6 122 27.9
Lsat_1_v5_gn_7_67341 Lactuca sativa HOM05D000176 ORTHO05D000106 2.5e-09 68.2 328 21.6
SGA_v2.0_scaffold161G37792 Striga asiatica HOM05D013081 ORTHO05D010903 3.3e-09 67.8 259 26.3
GSVIVG01017117001 Vitis vinifera HOM05D000176 ORTHO05D003511 5.6e-09 67.0 317 22.1
Peaxi162Scf00146g01211 Petunia axillaris HOM05D000176 ORTHO05D000106 7.3e-09 66.6 132 26.5
Prupe.6G357900 Prunus persica HOM05D011609 ORTHO05D000106 7.3e-09 66.6 158 28.5
MD09G1191600 Malus domestica HOM05D000176 ORTHO05D000106 9.6e-09 66.2 284 24.3
Ah.16g107440 Amaranthus hybridus HOM05D000176 ORTHO05D000106 1.3e-08 65.9 323 22.9
CSS0028049 Camellia sinensis var. sinensis HOM05D001875 ORTHO05D000106 1.3e-08 65.9 328 22.0
CSS0045164 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.3e-08 65.9 328 22.0
COL.COLO4_29177 Corchorus olitorius HOM05D017396 ORTHO05D025145 1.3e-08 65.9 204 27.0
MELO3C002881.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.3e-08 65.9 315 21.9
HanXRQChr06g0181031 Helianthus annuus HOM05D000176 ORTHO05D000106 1.3e-08 65.9 140 27.1
COL.COLO4_16369 Corchorus olitorius HOM05D000176 ORTHO05D000106 1.6e-08 65.5 122 25.4
AUR62022514 Chenopodium quinoa HOM05D000176 ORTHO05D000106 2.1e-08 65.1 316 23.7
Prupe.3G047800 Prunus persica HOM05D000176 ORTHO05D000106 2.1e-08 65.1 326 23.0
Sopen10g035120 Solanum pennellii HOM05D000176 ORTHO05D000106 2.1e-08 65.1 120 25.8
CANSAT56G1843 Cannabis sativa HOM05D000176 ORTHO05D000106 2.8e-08 64.7 328 23.2
PSO675G3031 Papaver somniferum HOM05D010975 ORTHO05D000106 3.6e-08 64.3 158 29.1
Hund07743 Selenicereus undatus HOM05D000176 ORTHO05D000106 3.6e-08 64.3 324 22.5
AUR62038386 Chenopodium quinoa HOM05D000176 ORTHO05D000106 4.8e-08 63.9 318 23.9
AUR62038389 Chenopodium quinoa HOM05D000176 ORTHO05D000106 4.8e-08 63.9 318 23.9
CsaV3_5G025870 Cucumis sativus L. HOM05D000176 ORTHO05D000106 4.8e-08 63.9 315 21.6
AUR62016889 Chenopodium quinoa HOM05D013081 ORTHO05D010903 6.2e-08 63.5 237 27.0
MD13G1054400 Malus domestica HOM05D000115 ORTHO05D003511 8.1e-08 63.2 271 22.9
Sed0026480 Sechium edule HOM05D000176 ORTHO05D000106 8.1e-08 63.2 315 21.6
Solyc10g085700.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 8.1e-08 63.2 115 24.3
MSTRG.10797 Avicennia marina HOM05D000176 ORTHO05D000106 1.1e-07 62.8 128 28.9
ClCG09G020530 Citrullus lanatus HOM05D000176 ORTHO05D000106 1.1e-07 62.8 318 21.4
Migut.C00132 Erythranthe guttata HOM05D000176 ORTHO05D000106 1.1e-07 62.8 275 26.2
HanXRQChr09g0246821 Helianthus annuus HOM05D000176 ORTHO05D000106 1.1e-07 62.8 337 22.3
QL05p010466 Quercus lobata HOM05D000176 ORTHO05D000106 1.1e-07 62.8 316 23.4
THA.LOC104808853 Tarenaya hassleriana HOM05D000176 ORTHO05D000106 1.1e-07 62.8 273 23.8
Duzib151G0015 Durio zibethinus HOM05D000176 ORTHO05D000106 1.4e-07 62.4 140 23.6
Nn5g26857 Nelumbo nucifera HOM05D000176 ORTHO05D000106 1.4e-07 62.4 137 27.0
Hund03714 Selenicereus undatus HOM05D000176 ORTHO05D000106 1.4e-07 62.4 125 24.8
EL10As19g24186 Beta vulgaris HOM05D000176 ORTHO05D000106 1.8e-07 62.0 317 23.0
Psat4g056600 Pisum sativum HOM05D015947 ORTHO05D013665 1.8e-07 62.0 180 29.4
arahy.Tifrunner.gnm1.ann1.ULKS2B Arachis hypogaea HOM05D000176 ORTHO05D000106 2.4e-07 61.6 137 27.0
Cc03_g14530 Coffea canephora HOM05D000176 ORTHO05D000106 2.4e-07 61.6 284 22.2
Dinv11360 Davidia involucrata HOM05D000176 ORTHO05D000106 2.4e-07 61.6 122 23.8
Dinv16983 Davidia involucrata HOM05D000176 ORTHO05D000106 2.4e-07 61.6 122 23.8
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.4e-07 61.6 328 22.6
Lj3C925T6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-07 61.6 348 21.6
GSVIVG01006780001 Vitis vinifera HOM05D000176 ORTHO05D000106 2.4e-07 61.6 328 22.3
Haze_21153 Corylus avellana HOM05D007651 ORTHO05D000106 3.1e-07 61.2 120 25.8
Rhsim06G0121800 Rhododendron simsii HOM05D000176 ORTHO05D000106 3.1e-07 61.2 325 21.8
Duzib138G0102 Durio zibethinus HOM05D000176 ORTHO05D000106 5.3e-07 60.5 335 23.0
Rhsim05G0230300 Rhododendron simsii HOM05D000176 ORTHO05D000106 5.3e-07 60.5 116 25.9
vmacro20367 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 5.3e-07 60.5 118 27.1
Gorai.011G127800 Gossypium raimondii HOM05D000176 ORTHO05D000106 6.9e-07 60.1 241 21.6
Actinidia29034 Actinidia chinensis HOM05D000176 ORTHO05D000106 1.2e-06 59.3 120 25.0
Oeu063771.2 Olea europaea HOM05D000176 ORTHO05D000106 1.2e-06 59.3 128 28.1
COL.COLO4_05314 Corchorus olitorius HOM05D017396 ORTHO05D025145 1.5e-06 58.9 125 27.2
Sp3g23470 Schrenkiella parvula HOM05D000176 ORTHO05D000106 1.5e-06 58.9 271 22.5
arahy.Tifrunner.gnm1.ann1.T1UFTC Arachis hypogaea HOM05D000176 ORTHO05D000106 2.0e-06 58.5 137 26.3
Cpa.g.sc0.116 Carica papaya HOM05D000176 ORTHO05D000106 2.0e-06 58.5 187 20.9
Nitab4.5_0000476g0120 Nicotiana tabacum HOM05D000176 ORTHO05D000106 2.0e-06 58.5 327 20.5
C03p55310 Brassica napus HOM05D000176 ORTHO05D000106 2.6e-06 58.2 280 22.1
BolC3t17803H Brassica oleracea HOM05D000176 ORTHO05D000106 2.6e-06 58.2 280 22.1
ECA240G4387 Erigeron canadensis HOM05D000176 ORTHO05D000106 2.6e-06 58.2 328 22.3
VMungo0331G1567 Vigna mungo HOM05D000176 ORTHO05D000106 2.6e-06 58.2 156 23.7
A03p44500 Brassica napus HOM05D000176 ORTHO05D000106 3.4e-06 57.8 271 22.1
BraA03t13583Z Brassica rapa HOM05D000176 ORTHO05D000106 3.4e-06 57.8 271 22.1
Ca_27746_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.4e-06 57.8 130 27.7
Migut.K00126 Erythranthe guttata HOM05D000176 ORTHO05D000106 3.4e-06 57.8 128 28.1
Nitab4.5_0008402g0020 Nicotiana tabacum HOM05D000176 ORTHO05D000106 3.4e-06 57.8 115 26.1
Os07g0238800 Oryza sativa ssp. japonica HOM05D000176 ORTHO05D000106 3.4e-06 57.8 144 28.5
Peaxi162Scf00384g01218 Petunia axillaris HOM05D000176 ORTHO05D000106 3.4e-06 57.8 128 28.9
Psat0s1818g0080 Pisum sativum HOM05D015964 ORTHO05D015958 3.4e-06 57.8 159 26.4
Migut.O00342 Erythranthe guttata HOM05D059431 ORTHO05D022538 5.8e-06 57.0 125 28.8
AL7G46810 Arabidopsis lyrata HOM05D000011 ORTHO05D013665 7.6e-06 56.6 272 21.3
Sc02g0000190 Simmondsia chinensis HOM05D000176 ORTHO05D000106 7.6e-06 56.6 122 25.4
CsaV3_6G015670 Cucumis sativus L. HOM05D000176 ORTHO05D000106 9.9e-06 56.2 333 21.0
PSO333G0034 Papaver somniferum HOM05D008063 ORTHO05D009799 9.9e-06 56.2 157 24.2
ScUNg0001080 Simmondsia chinensis HOM05D007651 ORTHO05D000106 9.9e-06 56.2 122 25.4


User provided reference genes

Program Settings