Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04312 Beta vulgaris HOM05D007026 ORTHO05D008493 2.7e-170 602.1 330 100.0
Sc11g0009270 Simmondsia chinensis HOM05D007026 ORTHO05D008493 1.3e-36 157.9 180 49.4
QL04p005492 Quercus lobata HOM05D007026 ORTHO05D008493 1.1e-35 154.8 164 51.8
TWI09G0295 Tripterygium wilfordii HOM05D007026 ORTHO05D008493 7.3e-35 152.1 140 58.6
SGA_v2.0_scaffold4G02258 Striga asiatica HOM05D007026 ORTHO05D008493 1.6e-34 151.0 181 47.0
Cfa010744 Carpinus fangiana HOM05D007026 ORTHO05D008493 8.0e-34 148.7 160 50.6
Potri.009G063700 Populus trichocarpa HOM05D007026 ORTHO05D008493 8.0e-34 148.7 164 51.2
Sabra09G0047000 Salix brachista HOM05D007026 ORTHO05D008493 8.0e-34 148.7 164 51.8
Hma1.2p1_0293F.1_g116330 Hydrangea macrophylla HOM05D007026 ORTHO05D008493 1.0e-33 148.3 215 43.3
Thecc.01G412700 Theobroma cacao HOM05D007026 ORTHO05D008493 1.8e-33 147.5 158 52.5
vmacro21182 Vaccinium macrocarpon HOM05D007026 ORTHO05D008493 1.8e-33 147.5 163 50.9
Duzib268G1513 Durio zibethinus HOM05D007026 ORTHO05D008493 8.9e-33 145.2 158 52.5
Rhsim01G0130400 Rhododendron simsii HOM05D007026 ORTHO05D008493 8.9e-33 145.2 161 50.9
Manes.10G145400 Manihot esculenta HOM05D007026 ORTHO05D008493 1.2e-32 144.8 172 51.2
PGR044G0728 Punica granatum HOM05D007026 ORTHO05D008493 1.5e-32 144.4 164 50.6
RcHm_v2.0_Chr1g0315651 Rosa chinensis HOM05D007026 ORTHO05D008493 1.5e-32 144.4 157 52.9
Gohir.D08G166400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 2.0e-32 144.1 172 48.3
Gorai.004G173800 Gossypium raimondii HOM05D007026 ORTHO05D008493 2.0e-32 144.1 172 48.3
Medtr8g036520 Medicago truncatula HOM05D007026 ORTHO05D008493 2.0e-32 144.1 140 54.3
Prupe.2G010600 Prunus persica HOM05D007026 ORTHO05D008493 3.4e-32 143.3 163 50.3
Lalb_Chr03g0033971 Lupinus albus HOM05D007026 ORTHO05D008493 4.4e-32 142.9 135 55.6
Psat4g148320 Pisum sativum HOM05D007026 ORTHO05D008493 4.4e-32 142.9 140 52.9
Haze_03229 Corylus avellana HOM05D007026 ORTHO05D008493 5.8e-32 142.5 156 51.3
FAN06G1399 Fragaria x ananassa HOM05D007026 ORTHO05D008493 5.8e-32 142.5 211 43.6
MD02G1314200 Malus domestica HOM05D007026 ORTHO05D008493 5.8e-32 142.5 136 57.4
MD07G1007900 Malus domestica HOM05D007026 ORTHO05D008493 5.8e-32 142.5 157 52.9
Cc02_g27730 Coffea canephora HOM05D007026 ORTHO05D008493 7.5e-32 142.1 174 48.3
Actinidia21558 Actinidia chinensis HOM05D007026 ORTHO05D008493 1.3e-31 141.4 166 47.0
CSS0028033 Camellia sinensis var. sinensis HOM05D007026 ORTHO05D008493 1.3e-31 141.4 215 42.3
FAN03G2284 Fragaria x ananassa HOM05D007026 ORTHO05D008493 1.3e-31 141.4 157 51.0
Solyc03g115460.3 Solanum lycopersicum HOM05D007026 ORTHO05D008493 1.3e-31 141.4 164 48.2
Sopen03g034460 Solanum pennellii HOM05D007026 ORTHO05D008493 1.3e-31 141.4 187 44.4
Glyma.13G204000 Glycine max HOM05D007026 ORTHO05D008493 1.7e-31 141.0 136 56.6
CANSAT80G1756 Cannabis sativa HOM05D007026 ORTHO05D008493 2.2e-31 140.6 157 47.8
Peaxi162Scf00428g00077 Petunia axillaris HOM05D007026 ORTHO05D008493 2.2e-31 140.6 175 45.1
MSTRG.28077 Avicennia marina HOM05D007026 ORTHO05D008493 2.9e-31 140.2 163 48.5
Cpa.g.sc245.8 Carica papaya HOM05D007026 ORTHO05D008493 2.9e-31 140.2 192 45.8
Lj3g0000564 Lotus japonicus HOM05D007026 ORTHO05D008493 2.9e-31 140.2 194 47.4
PGSC0003DMG400024551 Solanum tuberosum HOM05D007026 ORTHO05D008493 2.9e-31 140.2 177 46.3
arahy.Tifrunner.gnm1.ann1.VL74DI Arachis hypogaea HOM05D007026 ORTHO05D008493 3.7e-31 139.8 178 46.1
FAN10G3680 Fragaria x ananassa HOM05D007026 ORTHO05D008493 6.4e-31 139.0 157 51.0
unitig_0.g1578 Utricularia gibba HOM05D007026 ORTHO05D008493 6.4e-31 139.0 139 56.1
Atru.chr11.2644 Acer truncatum HOM05D007026 ORTHO05D008493 8.3e-31 138.7 206 42.2
MBI01_g27619_MAGBIO Magnolia biondii HOM05D007026 ORTHO05D008493 8.3e-31 138.7 184 46.7
Nn2g15423 Nelumbo nucifera HOM05D007026 ORTHO05D008493 1.4e-30 137.9 161 50.3
HPP92_022795 Vanilla planifolia HOM05D007026 ORTHO05D008493 1.4e-30 137.9 155 52.3
DCAR_029660 Daucus carota HOM05D007026 ORTHO05D008493 1.9e-30 137.5 136 55.1
Potri.001G269000 Populus trichocarpa HOM05D007026 ORTHO05D008493 3.2e-30 136.7 164 49.4
ClCG09G004280 Citrullus lanatus HOM05D007026 ORTHO05D008493 4.1e-30 136.3 138 53.6
TAR623G1735 Trochodendron aralioides HOM05D007026 ORTHO05D008493 4.1e-30 136.3 135 55.6
TAR623G0027 Trochodendron aralioides HOM05D007026 ORTHO05D008493 1.6e-29 134.4 135 54.8
Ciclev10032288m.g Citrus clementina HOM05D007026 ORTHO05D008493 2.0e-29 134.0 183 43.7
CsaV3_7G031200 Cucumis sativus L. HOM05D007026 ORTHO05D008493 2.0e-29 134.0 161 48.4
Migut.N01474 Erythranthe guttata HOM05D007026 ORTHO05D008493 6.0e-29 132.5 182 48.4
Nitab4.5_0002881g0080 Nicotiana tabacum HOM05D007026 ORTHO05D008493 6.0e-29 132.5 204 41.2
THA.LOC104826673 Tarenaya hassleriana HOM05D007026 ORTHO05D008493 6.0e-29 132.5 157 48.4
Migut.A00762 Erythranthe guttata HOM05D007026 ORTHO05D008493 7.8e-29 132.1 176 44.9
Phvul.011G212500 Phaseolus vulgaris HOM05D007026 ORTHO05D008493 1.0e-28 131.7 134 53.7
VMungo1127G0427 Vigna mungo HOM05D007026 ORTHO05D008493 1.7e-28 131.0 182 46.7
MELO3C023538.2 Cucumis melo HOM05D007026 ORTHO05D008493 2.3e-28 130.6 157 47.8
A03p37740 Brassica napus HOM05D007026 ORTHO05D008493 3.9e-28 129.8 156 46.8
BraA03t12929Z Brassica rapa HOM05D007026 ORTHO05D008493 3.9e-28 129.8 156 46.8
Carub.0003s1200 Capsella rubella HOM05D007026 ORTHO05D008493 3.9e-28 129.8 135 51.9
Sed0012425 Sechium edule HOM05D007026 ORTHO05D008493 8.6e-28 128.6 137 53.3
CARHR087160 Cardamine hirsuta HOM05D007026 ORTHO05D008493 1.1e-27 128.3 212 41.0
COL.COLO4_23920 Corchorus olitorius HOM05D007026 ORTHO05D008493 1.1e-27 128.3 137 50.4
BcaB04g18713 Brassica carinata HOM05D007026 ORTHO05D008493 1.5e-27 127.9 229 38.9
AT3G12650 Arabidopsis thaliana HOM05D007026 ORTHO05D008493 1.9e-27 127.5 153 47.7
BcaC01g04025 Brassica carinata HOM05D007026 ORTHO05D008493 1.9e-27 127.5 235 37.9
C03p45790 Brassica napus HOM05D007026 ORTHO05D008493 1.9e-27 127.5 235 37.9
BolC3t16854H Brassica oleracea HOM05D007026 ORTHO05D008493 1.9e-27 127.5 235 37.9
AL3G24320 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 2.5e-27 127.1 226 39.4
Thhalv10021417m.g Eutrema salsugineum HOM05D007026 ORTHO05D008493 3.3e-27 126.7 133 51.1
Lsat_1_v5_gn_1_108360 Lactuca sativa HOM05D007026 ORTHO05D008493 5.6e-27 125.9 179 44.7
Sp3g10790 Schrenkiella parvula HOM05D007026 ORTHO05D008493 5.6e-27 125.9 220 41.4
PSO339G4493 Papaver somniferum HOM05D007026 ORTHO05D008493 1.2e-26 124.8 177 44.6
A05p36850 Brassica napus HOM05D007026 ORTHO05D008493 2.1e-26 124.0 227 37.0
AUR62009374 Chenopodium quinoa HOM05D007026 ORTHO05D008493 2.1e-26 124.0 111 65.8
ECA248G3415 Erigeron canadensis HOM05D007026 ORTHO05D008493 8.1e-26 122.1 149 46.3
BraA05t22486Z Brassica rapa HOM05D007026 ORTHO05D008493 1.8e-25 120.9 227 36.1
Lj7P569T60 Lonicera japonica HOM05D007026 ORTHO05D008493 1.8e-25 120.9 148 51.4
HanXRQChr06g0185391 Helianthus annuus HOM05D007026 ORTHO05D008493 8.9e-25 118.6 171 42.7
Aqoxy1G00217 Aquilegia oxysepala HOM05D007026 ORTHO05D008493 1.2e-24 118.2 174 42.5
Aa31LG3G20 Aethionema arabicum HOM05D007026 ORTHO05D008493 1.5e-24 117.9 234 36.8
BcaB06g25527 Brassica carinata HOM05D007026 ORTHO05D008493 1.5e-24 117.9 200 39.5
Nitab4.5_0005198g0030 Nicotiana tabacum HOM05D007026 ORTHO05D008493 1.5e-24 117.9 143 48.3
ATR0605G064 Amborella trichopoda HOM05D007026 ORTHO05D008493 9.8e-24 115.2 154 45.5
SHI26926 Sapria himalayana HOM05D007026 ORTHO05D008493 2.2e-23 114.0 168 44.6
Dinv09365 Davidia involucrata HOM05D007026 ORTHO05D008493 4.1e-22 109.8 137 46.0
Os02g0718000 Oryza sativa ssp. japonica HOM05D007026 ORTHO05D008493 2.7e-21 107.1 158 41.1
Zm00001eb189290 Zea mays HOM05D007026 ORTHO05D008493 3.5e-21 106.7 154 42.2
Gohir.A08G145400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 4.6e-21 106.3 134 46.3
Dinv43456 Davidia involucrata HOM05D007026 ORTHO05D008493 1.0e-20 105.1 144 46.5
RcHm_v2.0_Chr1g0315191 Rosa chinensis HOM05D007026 ORTHO05D008493 1.3e-20 104.8 109 53.2
RcHm_v2.0_Chr1g0315521 Rosa chinensis HOM05D007026 ORTHO05D008493 1.3e-20 104.8 109 53.2
Actinidia20675 Actinidia chinensis HOM05D007026 ORTHO05D008493 1.7e-20 104.4 121 47.9
RcHm_v2.0_Chr1g0315371 Rosa chinensis HOM05D007026 ORTHO05D008493 3.9e-20 103.2 109 52.3
FvH4_7g00860 Fragaria vesca HOM05D007026 ORTHO05D008493 1.1e-19 101.7 119 49.6
RcHm_v2.0_Chr1g0315011 Rosa chinensis HOM05D007026 ORTHO05D008493 2.8e-18 97.1 109 51.4
PSO384G4663 Papaver somniferum HOM05D007026 ORTHO05D008493 3.6e-18 96.7 142 44.4
Eucgr.J01262 Eucalyptus grandis HOM05D007026 ORTHO05D008493 2.0e-16 90.9 108 46.3
BcaC05g29251 Brassica carinata HOM05D007026 ORTHO05D008493 3.4e-16 90.1 118 43.2
BolC5t34196H Brassica oleracea HOM05D007026 ORTHO05D008493 1.2e-13 81.6 109 42.2
AUR62044089 Chenopodium quinoa HOM05D005782 ORTHO05D007436 6.0e-13 79.3 53 73.6
BcaB08g35591 Brassica carinata HOM05D007026 ORTHO05D008493 2.5e-11 73.9 131 37.4
Pp3c2_10070 Physcomitrium patens HOM05D007026 ORTHO05D008493 1.4e-09 68.2 133 36.8
SMO147G0317 Selaginella moellendorffii HOM05D007026 ORTHO05D008493 5.2e-09 66.2 139 32.4
AL7G43500 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 5.8e-08 62.8 54 55.6
TPR.G17515 Trifolium pratense HOM05D007026 ORTHO05D008493 1.3e-07 61.6 182 28.6
AUR62023055 Chenopodium quinoa HOM05D005782 ORTHO05D008493 6.4e-07 59.3 39 74.4
TPR.G28471 Trifolium pratense HOM05D007026 ORTHO05D008493 5.4e-06 56.2 37 67.6


User provided reference genes

Program Settings