Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 3.5e-89 331.6 171 100.0
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 5.6e-71 271.2 143 97.9
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 1.7e-64 249.6 143 88.8
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 1.5e-55 219.9 141 78.0
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 4.9e-51 204.9 144 72.9
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 2.4e-50 202.6 141 73.0
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 2.7e-49 199.1 111 92.8
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 4.6e-49 198.4 143 72.0
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 7.8e-49 197.6 143 69.9
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 1.0e-48 197.2 143 71.3
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 1.0e-48 197.2 166 66.3
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 3.0e-48 195.7 143 69.2
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 3.9e-48 195.3 143 67.8
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 8.6e-48 194.1 143 67.1
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 1.9e-47 193.0 143 68.5
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 2.5e-47 192.6 144 67.4
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 2.5e-47 192.6 143 69.2
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 5.6e-47 191.4 144 69.4
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 1.6e-46 189.9 139 70.5
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 2.8e-46 189.1 143 68.5
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 2.8e-46 189.1 152 63.8
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 3.6e-46 188.7 143 69.2
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 4.7e-46 188.3 146 66.4
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 6.2e-46 188.0 146 65.8
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 6.2e-46 188.0 133 71.4
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 8.1e-46 187.6 146 65.1
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 8.1e-46 187.6 146 65.1
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 8.1e-46 187.6 146 69.2
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 1.1e-45 187.2 146 64.4
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.1e-45 187.2 146 65.8
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 1.4e-45 186.8 144 68.8
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 1.4e-45 186.8 149 66.4
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 1.4e-45 186.8 143 65.7
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 1.4e-45 186.8 146 65.8
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 1.4e-45 186.8 143 68.5
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 1.8e-45 186.4 143 67.1
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 1.8e-45 186.4 143 66.4
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 2.4e-45 186.0 144 68.8
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 2.4e-45 186.0 144 68.8
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 2.4e-45 186.0 143 67.8
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 3.1e-45 185.7 146 63.7
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 3.1e-45 185.7 146 63.7
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 3.1e-45 185.7 143 66.4
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 3.1e-45 185.7 150 64.7
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 5.2e-45 184.9 121 78.5
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 6.8e-45 184.5 144 68.1
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 6.8e-45 184.5 117 79.5
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 6.8e-45 184.5 143 64.3
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 8.9e-45 184.1 155 60.6
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 1.2e-44 183.7 143 63.6
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 2.0e-44 183.0 143 66.4
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 5.8e-44 181.4 144 66.7
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 5.8e-44 181.4 145 65.5
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 7.6e-44 181.0 144 66.0
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 1.3e-43 180.3 147 67.3
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 1.3e-43 180.3 143 62.9
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 1.7e-43 179.9 123 70.7
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 1.7e-43 179.9 136 66.9
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 6.4e-43 177.9 111 78.4
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 6.4e-43 177.9 138 65.2
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 1.1e-42 177.2 117 75.2
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 1.1e-42 177.2 176 56.2
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 1.4e-42 176.8 164 56.1
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.9e-42 176.4 111 79.3
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 2.4e-42 176.0 119 69.7
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 3.2e-42 175.6 117 74.4
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 4.2e-42 175.3 136 65.4
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 5.4e-42 174.9 131 67.2
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 5.4e-42 174.9 143 63.6
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 1.2e-41 173.7 111 74.8
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.6e-41 173.3 123 69.1
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 2.1e-41 172.9 154 61.7
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 2.7e-41 172.6 146 62.3
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 3.5e-41 172.2 135 63.7
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 3.5e-41 172.2 146 60.3
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 7.8e-41 171.0 107 79.4
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 1.3e-40 170.2 146 59.6
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 5.1e-40 168.3 143 60.8
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 1.9e-39 166.4 112 68.8
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 2.5e-39 166.0 143 61.5
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 4.3e-39 165.2 146 60.3
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 5.6e-39 164.9 147 60.5
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 5.6e-39 164.9 119 68.1
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 7.3e-39 164.5 112 68.8
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 1.3e-38 163.7 114 70.2
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 2.1e-38 162.9 135 65.9
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 2.1e-38 162.9 148 60.1
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 4.8e-38 161.8 143 56.6
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 1.1e-37 160.6 110 72.7
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 2.0e-36 156.4 107 70.1
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 3.4e-36 155.6 150 54.0
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 3.4e-36 155.6 150 54.0
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 1.7e-35 153.3 135 61.5
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 4.2e-34 148.7 96 76.0
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 4.2e-34 148.7 96 76.0
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 1.3e-32 143.7 112 67.0
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 2.8e-30 136.0 107 61.7
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 2.8e-30 136.0 107 61.7
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 9.0e-29 131.0 111 63.1
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 3.4e-28 129.0 78 83.3
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 1.4e-26 123.6 102 60.8
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 7.1e-26 121.3 95 61.1
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 9.3e-26 120.9 76 77.6
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 2.1e-25 119.8 77 76.6
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 2.1e-25 119.8 76 76.3
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 1.3e-24 117.1 76 73.7
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 1.6e-22 110.2 73 75.3
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 4.8e-22 108.6 106 50.0
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 4.8e-22 108.6 137 48.9
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.7e-19 100.1 73 64.4
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 8.4e-19 97.8 91 54.9
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 5.5e-18 95.1 75 62.7
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 7.9e-17 91.3 124 37.9
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 6.5e-11 71.6 47 72.3
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 7.9e-09 64.7 114 31.6
Psat5g125520 Pisum sativum HOM05D002744 ORTHO05D008989 1.0e-08 64.3 61 54.1


User provided reference genes

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