Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04145 Beta vulgaris HOM05D000264 ORTHO05D000152 4.4e-120 434.9 258 100.0
EL10Ac2g04437 Beta vulgaris HOM05D000264 ORTHO05D000152 7.8e-85 317.8 218 83.0
EL10Ac2g04147 Beta vulgaris HOM05D000264 ORTHO05D000152 2.1e-82 309.7 232 79.3
AUR62012454 Chenopodium quinoa HOM05D000264 ORTHO05D000152 2.0e-56 223.4 220 60.0
Ah.16g104880 Amaranthus hybridus HOM05D000264 ORTHO05D000152 5.3e-41 172.2 226 40.7
AUR62031577 Chenopodium quinoa HOM05D000264 ORTHO05D000152 3.0e-36 156.4 231 48.9
AUR62012453 Chenopodium quinoa HOM05D000264 ORTHO05D000152 3.3e-35 152.9 231 47.6
Hund19362 Selenicereus undatus HOM05D000264 ORTHO05D000152 5.3e-33 145.6 234 39.3
Hund19604 Selenicereus undatus HOM05D000264 ORTHO05D000152 2.2e-26 123.6 221 37.1
Ah.16g104860 Amaranthus hybridus HOM05D000264 ORTHO05D000152 8.2e-26 121.7 162 48.8
AUR62031578 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.3e-23 114.4 220 35.9
Hund19605 Selenicereus undatus HOM05D000264 ORTHO05D000152 1.8e-20 104.0 219 31.5
QL10p052455 Quercus lobata HOM05D000264 ORTHO05D000152 3.0e-12 76.6 228 27.6
QL10p054050 Quercus lobata HOM05D000264 ORTHO05D000152 1.2e-11 74.7 232 28.9
CiPaw.01G190700 Carya illinoinensis HOM05D000264 ORTHO05D000152 2.0e-11 73.9 224 28.6
Eucgr.D01246 Eucalyptus grandis HOM05D000264 ORTHO05D000152 4.8e-10 69.3 219 27.9
Ah.16g108030 Amaranthus hybridus HOM05D000264 ORTHO05D000152 1.1e-09 68.2 122 36.1
Manes.03G169300 Manihot esculenta HOM05D000264 ORTHO05D000152 1.4e-09 67.8 229 35.8
Thecc.04G245500 Theobroma cacao HOM05D000264 ORTHO05D000152 1.4e-09 67.8 247 26.3
Eucgr.I00529 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.4e-09 67.0 247 33.2
Eucgr.D01537 Eucalyptus grandis HOM05D000264 ORTHO05D000152 3.1e-09 66.6 221 27.1
Eucgr.D01240 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.2e-08 64.7 221 27.1
Eucgr.D01248 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.6e-08 64.3 227 33.5
Eucgr.D01534 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.6e-08 64.3 227 33.5
Eucgr.L01065 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.6e-08 64.3 122 35.2
FAN26G1085 Fragaria x ananassa HOM05D000264 ORTHO05D000152 2.0e-08 63.9 237 26.6
Hma1.2p1_1276F.1_g272230 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 2.0e-08 63.9 231 25.1
Ciclev10019517m.g Citrus clementina HOM05D000264 ORTHO05D000152 2.7e-08 63.5 240 33.8
arahy.Tifrunner.gnm1.ann1.S75E27 Arachis hypogaea HOM05D000264 ORTHO05D000152 4.5e-08 62.8 237 27.0
Eucgr.D01232 Eucalyptus grandis HOM05D000264 ORTHO05D000152 4.5e-08 62.8 116 33.6
Ciclev10007078m.g Citrus clementina HOM05D000264 ORTHO05D000152 5.9e-08 62.4 225 27.6
arahy.Tifrunner.gnm1.ann1.02EYZX Arachis hypogaea HOM05D000264 ORTHO05D000152 7.7e-08 62.0 249 26.1
Dinv29918 Davidia involucrata HOM05D000264 ORTHO05D000152 1.0e-07 61.6 218 26.6
Eucgr.D01523 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.0e-07 61.6 114 35.1
Eucgr.D01244 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.3e-07 61.2 221 26.7
FvH4_1g10400 Fragaria vesca HOM05D000264 ORTHO05D000152 2.9e-07 60.1 228 25.9
FAN19G0684 Fragaria x ananassa HOM05D000264 ORTHO05D000152 2.9e-07 60.1 228 25.9
Hma1.2p1_1193F.1_g265640 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 2.9e-07 60.1 218 26.6
QL10p054374 Quercus lobata HOM05D000264 ORTHO05D000152 2.9e-07 60.1 231 33.3
RcHm_v2.0_Chr7g0213401 Rosa chinensis HOM05D000264 ORTHO05D000152 3.8e-07 59.7 244 23.4
Eucgr.D01235 Eucalyptus grandis HOM05D000264 ORTHO05D000152 5.0e-07 59.3 220 35.5
Hma1.2p1_1276F.1_g272220 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 5.0e-07 59.3 231 30.7
Eucgr.D01254 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.5e-07 58.9 229 27.1
Eucgr.D01257 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.5e-07 58.9 223 27.4
Eucgr.D01277 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.5e-07 58.9 231 25.1
Thecc.04G245400 Theobroma cacao HOM05D000264 ORTHO05D000152 6.5e-07 58.9 230 23.0
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 8.5e-07 58.5 225 24.4
Dinv29924 Davidia involucrata HOM05D000264 ORTHO05D000152 1.1e-06 58.2 225 24.4
Eucgr.D01530 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.1e-06 58.2 114 35.1
Gorai.012G179500 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.1e-06 58.2 241 29.9
Potri.019G108200 Populus trichocarpa HOM05D000264 ORTHO05D000152 1.1e-06 58.2 225 26.2
GSVIVG01013597001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.1e-06 58.2 231 32.9
Eucgr.D01269 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.5e-06 57.8 114 36.0
Ciclev10024345m.g Citrus clementina HOM05D000264 ORTHO05D000152 1.9e-06 57.4 222 34.2
Thecc.10G061700 Theobroma cacao HOM05D000264 ORTHO05D000152 1.9e-06 57.4 229 34.1
Ciclev10006527m.g Citrus clementina HOM05D000264 ORTHO05D000152 2.5e-06 57.0 220 25.0
Eucgr.D01524 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.5e-06 57.0 121 34.7
Gohir.D04G185000 Gossypium hirsutum HOM05D000264 ORTHO05D000152 3.2e-06 56.6 241 29.9
Hma1.2p1_1276F.1_g272240 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 3.2e-06 56.6 218 27.1
QL10p054384 Quercus lobata HOM05D000264 ORTHO05D000152 3.2e-06 56.6 161 28.0
Atru.chr3.4253 Acer truncatum HOM05D000264 ORTHO05D000152 4.2e-06 56.2 215 35.8
Ciclev10007131m.g Citrus clementina HOM05D000264 ORTHO05D000152 4.2e-06 56.2 225 34.7
TAR628G0075 Trochodendron aralioides HOM05D000264 ORTHO05D000152 5.5e-06 55.8 241 26.6
GSVIVG01001636001 Vitis vinifera HOM05D000264 ORTHO05D000152 5.5e-06 55.8 231 34.2
arahy.Tifrunner.gnm1.ann1.98V0PV Arachis hypogaea HOM05D000992 ORTHO05D006704 9.4e-06 55.1 126 30.2
MELO3C004402.2 Cucumis melo HOM05D000264 ORTHO05D000152 9.4e-06 55.1 215 26.0
Glyma.08G079800 Glycine max HOM05D000264 ORTHO05D000152 9.4e-06 55.1 224 30.4


User provided reference genes

Program Settings