Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04054 Beta vulgaris HOM05D007491 ORTHO05D009489 2.2e-52 208.8 109 100.0
Hund19532 Selenicereus undatus HOM05D007491 ORTHO05D009489 9.1e-27 123.6 104 67.3
AUR62009312 Chenopodium quinoa HOM05D007491 ORTHO05D009489 3.5e-26 121.7 88 77.3
Ah.16g106040 Amaranthus hybridus HOM05D007491 ORTHO05D009489 7.5e-21 104.0 85 74.1
Peaxi162Scf00231g00326 Petunia axillaris HOM05D007491 ORTHO05D009489 7.0e-11 70.9 98 50.0
TWI63G0394 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 1.2e-10 70.1 95 46.3
Thecc.09G041400 Theobroma cacao HOM05D007491 ORTHO05D009489 4.6e-10 68.2 94 47.9
Duzib150G1582 Durio zibethinus HOM05D007491 ORTHO05D009489 7.8e-10 67.4 94 45.7
GSVIVG01035656001 Vitis vinifera HOM05D007491 ORTHO05D009489 1.0e-09 67.0 92 48.9
Duzib187G0523 Durio zibethinus HOM05D007491 ORTHO05D009489 1.3e-09 66.6 94 46.8
Gohir.D06G094200 Gossypium hirsutum HOM05D007491 ORTHO05D009489 1.3e-09 66.6 99 46.5
Dinv41621 Davidia involucrata HOM05D007491 ORTHO05D009489 1.7e-09 66.2 92 52.2
Gorai.010G108700 Gossypium raimondii HOM05D007491 ORTHO05D009489 2.3e-09 65.9 99 46.5
TAR383G0584 Trochodendron aralioides HOM05D007491 ORTHO05D009489 2.3e-09 65.9 92 50.0
Ciclev10010011m.g Citrus clementina HOM05D007491 ORTHO05D009489 3.0e-09 65.5 96 51.0
COL.COLO4_18682 Corchorus olitorius HOM05D007491 ORTHO05D009489 3.0e-09 65.5 78 48.7
CiPaw.03G229400 Carya illinoinensis HOM05D007491 ORTHO05D009489 5.0e-09 64.7 92 46.7
Lj2g0023927 Lotus japonicus HOM05D007491 ORTHO05D009489 6.6e-09 64.3 83 49.4
Manes.16G071301 Manihot esculenta HOM05D007491 ORTHO05D009489 8.6e-09 63.9 93 45.2
Nn2g11682 Nelumbo nucifera HOM05D007491 ORTHO05D009489 8.6e-09 63.9 92 50.0
Nn3g18087 Nelumbo nucifera HOM05D007491 ORTHO05D009489 1.5e-08 63.2 95 51.6
Oeu013426.2 Olea europaea HOM05D007491 ORTHO05D009489 2.5e-08 62.4 90 51.1
Lsat_1_v5_gn_5_33441 Lactuca sativa HOM05D007491 ORTHO05D009489 5.6e-08 61.2 84 48.8
AT1G55205 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 7.3e-08 60.8 64 60.9
TWI34G1809 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 7.3e-08 60.8 95 44.2
Rhsim01G0100500 Rhododendron simsii HOM05D007491 ORTHO05D009489 1.6e-07 59.7 93 50.5
Potri.018G082800 Populus trichocarpa HOM05D007491 ORTHO05D009489 2.1e-07 59.3 95 44.2
TWI32G0642 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 2.8e-07 58.9 97 44.3
CSS0038485 Camellia sinensis var. sinensis HOM05D007491 ORTHO05D009489 8.0e-07 57.4 94 46.8
Cfa003238 Carpinus fangiana HOM05D007491 ORTHO05D009489 8.0e-07 57.4 96 44.8
Haze_25768 Corylus avellana HOM05D007491 ORTHO05D009489 8.0e-07 57.4 80 46.2
Gohir.A06G094700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 8.0e-07 57.4 105 41.0
Hma1.2p1_1463F.1_g285180 Hydrangea macrophylla HOM05D007491 ORTHO05D009489 8.0e-07 57.4 86 51.2
AL1G63250 Arabidopsis lyrata HOM05D007491 ORTHO05D009489 1.4e-06 56.6 62 59.7
PSO782G0237 Papaver somniferum HOM05D007491 ORTHO05D009489 1.8e-06 56.2 94 50.0
PGR102G1855 Punica granatum HOM05D007491 ORTHO05D009489 2.3e-06 55.8 89 46.1
Dinv36653 Davidia involucrata HOM05D007491 ORTHO05D009489 3.1e-06 55.5 91 46.2
THA.LOC104822629 Tarenaya hassleriana HOM05D007491 ORTHO05D009489 3.1e-06 55.5 92 45.7
CARHR044840 Cardamine hirsuta HOM05D007491 ORTHO05D009489 4.0e-06 55.1 76 51.3
Thhalv10011893m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 4.0e-06 55.1 64 54.7
Sabra18G0070600 Salix brachista HOM05D007491 ORTHO05D009489 5.2e-06 54.7 95 43.2
Gohir.D07G006700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 8.9e-06 53.9 57 54.4
PSO566G0269 Papaver somniferum HOM05D007491 ORTHO05D009489 8.9e-06 53.9 94 48.9


User provided reference genes

Program Settings