Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 1.2e-310 1068.9 506 100.0
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 2.5e-276 954.9 510 88.8
AUR62041718 Chenopodium quinoa HOM05D005302 ORTHO05D006422 1.6e-227 792.7 461 83.3
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 7.6e-217 757.3 461 74.6
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 2.9e-216 755.4 447 77.4
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 1.9e-215 752.7 481 71.3
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 5.4e-215 751.1 470 73.4
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 7.1e-215 750.7 491 72.1
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 9.3e-215 750.4 459 74.1
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 9.3e-215 750.4 459 74.1
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 1.2e-214 750.0 481 71.7
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 1.2e-214 750.0 475 72.0
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 2.7e-214 748.8 467 73.7
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 4.6e-214 748.0 478 72.0
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 6.0e-214 747.7 434 75.8
Glyma.04G082500 Glycine max HOM05D005302 ORTHO05D006422 1.7e-213 746.1 473 72.7
Glyma.06G084100 Glycine max HOM05D005302 ORTHO05D006422 1.7e-213 746.1 428 77.3
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 6.6e-213 744.2 488 70.7
RcHm_v2.0_Chr6g0306001 Rosa chinensis HOM05D005302 ORTHO05D006422 8.7e-213 743.8 485 71.1
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 1.1e-212 743.4 473 71.9
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 1.9e-212 742.7 466 73.4
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 2.5e-212 742.3 481 70.7
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 3.3e-212 741.9 442 75.8
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 3.3e-212 741.9 497 69.2
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 4.3e-212 741.5 475 72.8
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 5.6e-212 741.1 512 71.1
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 1.3e-211 740.0 441 75.3
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 1.3e-211 740.0 496 68.3
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 2.8e-211 738.8 449 73.7
VMungo1309G1003 Vigna mungo HOM05D005302 ORTHO05D006422 2.8e-211 738.8 427 77.3
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 3.6e-211 738.4 468 72.9
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 8.1e-211 737.3 509 69.0
Phvul.009G108200 Phaseolus vulgaris HOM05D005302 ORTHO05D006422 8.1e-211 737.3 427 76.1
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 1.1e-210 736.9 492 69.7
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 1.8e-210 736.1 468 71.8
Lj1g0022106 Lotus japonicus HOM05D005302 ORTHO05D006422 4.0e-210 734.9 430 75.8
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 1.5e-209 733.0 457 73.7
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 1.5e-209 733.0 501 69.1
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 2.0e-209 732.6 482 69.9
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 2.6e-209 732.3 510 67.6
Ca_15604_v3 Cicer arietinum L. HOM05D005302 ORTHO05D006422 4.4e-209 731.5 423 76.8
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.7e-208 729.6 501 68.7
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 2.9e-208 728.8 488 69.1
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 1.4e-207 726.5 427 75.6
Ah.16g105570 Amaranthus hybridus HOM05D005302 ORTHO05D006422 1.9e-207 726.1 370 88.9
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 2.4e-207 725.7 495 68.9
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 3.2e-207 725.3 481 69.9
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 4.2e-207 724.9 473 70.8
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 4.2e-207 724.9 497 67.0
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 5.4e-207 724.5 485 68.7
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 5.4e-207 724.5 489 68.5
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 7.1e-207 724.2 496 68.3
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 9.3e-207 723.8 444 72.5
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 1.6e-206 723.0 492 69.3
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 2.1e-206 722.6 489 67.9
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 2.7e-206 722.2 510 66.9
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 4.6e-206 721.5 502 65.9
MD08G1115600 Malus domestica HOM05D005302 ORTHO05D006422 6.0e-206 721.1 491 70.1
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 1.3e-205 719.9 425 75.5
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 8.7e-205 717.2 443 72.7
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 8.7e-205 717.2 454 71.8
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 2.5e-204 715.7 457 71.1
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 2.5e-204 715.7 483 68.5
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 3.3e-204 715.3 453 71.7
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 3.3e-204 715.3 452 71.5
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 3.3e-204 715.3 453 71.7
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 4.3e-204 714.9 457 70.5
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea HOM05D005302 ORTHO05D006422 7.3e-204 714.1 423 75.2
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 7.3e-204 714.1 472 68.9
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 7.3e-204 714.1 443 73.1
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 1.3e-203 713.4 443 72.9
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 3.6e-203 711.8 443 72.9
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 4.8e-203 711.4 427 74.0
Duzib150G0232 Durio zibethinus HOM05D005302 ORTHO05D006422 8.1e-203 710.7 457 69.8
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 1.8e-202 709.5 438 73.3
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 1.8e-202 709.5 441 71.9
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 6.9e-202 707.6 427 74.5
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 2.0e-201 706.1 496 65.9
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 3.4e-201 705.3 500 65.0
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 3.4e-201 705.3 474 68.1
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 8.4e-200 700.7 484 67.4
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 1.1e-199 700.3 427 72.1
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 2.7e-198 695.7 480 68.8
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 3.9e-197 691.8 531 62.9
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 2.5e-196 689.1 481 64.7
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 3.3e-196 688.7 490 65.9
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 1.3e-195 686.8 424 72.2
ClCG08G012300 Citrullus lanatus HOM05D005302 ORTHO05D006422 1.8e-194 682.9 516 65.3
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 3.1e-194 682.2 489 65.4
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 3.4e-193 678.7 423 74.7
FAN15G3230 Fragaria x ananassa HOM05D005302 ORTHO05D006422 4.5e-193 678.3 503 64.0
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 7.6e-193 677.6 508 64.0
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 1.0e-192 677.2 572 58.6
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.7e-192 676.4 441 66.9
unitig_32.g11070 Utricularia gibba HOM05D005302 ORTHO05D006422 2.9e-192 675.6 479 64.1
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 6.7e-189 664.5 439 68.6
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 5.3e-186 654.8 545 59.4
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 6.9e-186 654.4 397 74.1
Cpa.g.sc7.259 Carica papaya HOM05D005302 ORTHO05D006422 4.6e-182 641.7 378 75.4
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 4.6e-182 641.7 461 67.2
LjContig00226g0022694 Lotus japonicus HOM05D005302 ORTHO05D006422 1.8e-181 639.8 380 75.0
LjContig00518g0000858 Lotus japonicus HOM05D005302 ORTHO05D006422 1.8e-181 639.8 380 75.0
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 1.4e-173 613.6 380 73.4
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 5.5e-167 591.7 428 64.3
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 3.3e-164 582.4 430 64.2
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis HOM05D005302 ORTHO05D006422 1.7e-163 580.1 417 63.5
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 1.7e-163 580.1 353 74.2
Cfa013357 Carpinus fangiana HOM05D005302 ORTHO05D006422 1.8e-162 576.6 428 62.9
Pp3c7_470 Physcomitrium patens HOM05D005302 ORTHO05D006422 1.5e-161 573.5 455 58.9
vmacro11066 Vaccinium macrocarpon HOM05D005302 ORTHO05D006422 1.8e-157 560.1 408 65.7
Mapoly0027s0036 Marchantia polymorpha HOM05D005302 ORTHO05D006422 8.8e-157 557.8 429 59.0
Cfa013356 Carpinus fangiana HOM05D005302 ORTHO05D006422 4.4e-156 555.4 325 75.7
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 4.4e-156 555.4 518 54.1
Pp3c20_5100 Physcomitrium patens HOM05D005302 ORTHO05D006422 2.4e-146 523.1 425 57.4
SMO351G0603 Selaginella moellendorffii HOM05D005302 ORTHO05D006422 7.0e-146 521.5 396 59.6
Lj1g0026118 Lotus japonicus HOM05D005302 ORTHO05D006422 2.7e-145 519.6 431 59.4
Zm00001eb237270 Zea mays HOM05D005302 ORTHO05D006422 2.3e-136 490.0 320 67.8
CBR_g222 Chara braunii HOM05D005302 ORTHO05D006422 3.6e-134 482.6 418 55.0
Cc07_g15020 Coffea canephora HOM05D005302 ORTHO05D006422 4.7e-126 455.7 269 73.6
Hma1.2p1_1884F.1_g306470 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 9.8e-124 448.0 252 79.0
Cre01.g013801 Chlamydomonas reinhardtii HOM05D005302 ORTHO05D006422 6.2e-102 375.6 454 41.9
Lj7A704G80 Lonicera japonica HOM05D005302 ORTHO05D006422 3.1e-93 346.7 218 68.8
Hma1.2p1_1884F.1_g306480 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 2.2e-75 287.3 184 70.1
Lj7A704G81 Lonicera japonica HOM05D005302 ORTHO05D006422 1.3e-72 278.1 162 76.5
MCO11G337 Micromonas commoda HOM05D005302 ORTHO05D006422 5.7e-71 272.7 419 38.7
CDE05G2043 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 3.0e-64 250.4 367 39.2
Hma1.2p1_0393F.1_g143070 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.4e-61 241.5 148 70.3
Hma1.2p1_0393F.1_g143090 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.5e-55 221.5 182 60.4
SEGI_29042 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 2.0e-55 221.1 110 85.5
Glyma.04G082300 Glycine max HOM05D005302 ORTHO05D006422 5.7e-55 219.5 158 65.2
SEGI_31241 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 1.2e-44 185.3 161 52.2
FAN24G1627 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.9e-42 177.9 118 66.1
Potri.006G240100 Populus trichocarpa HOM05D005302 ORTHO05D006422 1.3e-38 165.2 190 45.8
Sabra18G0041600 Salix brachista HOM05D005302 ORTHO05D006422 1.4e-37 161.8 110 65.5
SEGI_07805 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 1.8e-37 161.4 152 54.6
arahy.Tifrunner.gnm1.ann1.B6YE6K Arachis hypogaea HOM05D005302 ORTHO05D006422 2.8e-30 137.5 188 42.0
CDE05G1694 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 3.3e-18 97.4 61 67.2
Sabra18G0041700 Salix brachista HOM05D005302 ORTHO05D006422 1.3e-14 85.5 60 56.7
CDE02G1858 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 8.9e-08 62.8 153 33.3
BcaC09g52073 Brassica carinata HOM05D002602 ORTHO05D002661 1.3e-06 58.9 41 56.1


User provided reference genes

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