Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 7.0e-179 630.6 330 100.0
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.3e-137 492.7 330 81.8
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 2.5e-128 462.6 332 75.9
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.9e-120 436.4 356 70.8
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 1.3e-119 433.7 327 72.2
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.2e-117 427.2 292 76.7
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 4.4e-117 425.2 334 72.5
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 4.4e-117 425.2 329 70.8
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 5.8e-117 424.9 328 71.3
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 5.8e-117 424.9 326 69.0
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 5.4e-115 418.3 331 69.5
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.1e-114 416.4 334 68.0
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 2.7e-114 416.0 333 68.8
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 4.6e-114 415.2 327 69.1
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 5.1e-113 411.8 327 68.2
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 5.1e-113 411.8 327 70.6
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 6.6e-113 411.4 331 68.3
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 1.1e-112 410.6 327 67.6
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 1.5e-112 410.2 331 68.6
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 1.5e-112 410.2 332 68.1
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 1.9e-112 409.8 327 68.5
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 9.6e-112 407.5 331 67.4
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 9.6e-112 407.5 331 68.6
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 1.3e-111 407.1 335 67.2
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 3.6e-111 405.6 331 66.2
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 3.6e-111 405.6 330 67.9
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 6.2e-111 404.8 330 66.7
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 6.2e-111 404.8 260 78.8
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 6.2e-111 404.8 325 68.6
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.4e-110 403.7 330 67.9
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 1.4e-110 403.7 327 67.9
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 1.8e-110 403.3 325 68.6
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.8e-110 403.3 330 66.1
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.4e-110 402.9 335 66.6
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 2.4e-110 402.9 332 68.4
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 5.3e-110 401.7 324 67.6
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 5.3e-110 401.7 327 67.6
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 9.0e-110 401.0 335 68.1
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 1.2e-109 400.6 260 77.7
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 1.5e-109 400.2 329 69.0
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 2.6e-109 399.4 330 67.3
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 4.5e-109 398.7 327 67.0
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 5.8e-109 398.3 336 66.1
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 9.9e-109 397.5 325 68.3
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 1.7e-108 396.7 329 66.9
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 2.2e-108 396.4 330 66.1
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 2.9e-108 396.0 335 66.3
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 2.9e-108 396.0 260 78.8
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 2.9e-108 396.0 335 66.0
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 3.8e-108 395.6 334 66.2
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 4.9e-108 395.2 260 78.8
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 6.4e-108 394.8 339 66.1
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 8.4e-108 394.4 260 78.1
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 1.1e-107 394.0 339 65.8
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.1e-107 394.0 260 78.5
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 1.1e-107 394.0 328 68.3
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 1.4e-107 393.7 326 68.1
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 5.4e-107 391.7 249 80.3
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 1.2e-106 390.6 324 66.7
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.6e-106 390.2 330 67.0
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 3.5e-106 389.0 327 66.7
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 1.8e-105 386.7 259 77.6
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 3.0e-105 386.0 259 76.4
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 5.1e-105 385.2 349 62.2
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 5.1e-105 385.2 317 66.6
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 6.7e-105 384.8 278 72.7
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 8.7e-105 384.4 331 65.6
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 1.5e-104 383.6 328 65.5
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 1.9e-104 383.3 357 61.6
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 1.9e-104 383.3 292 70.9
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 2.5e-104 382.9 299 68.6
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 7.4e-104 381.3 329 65.7
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 2.1e-103 379.8 327 64.5
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 3.7e-103 379.0 259 75.7
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 4.8e-103 378.6 331 65.0
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 6.2e-103 378.3 376 59.0
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 1.4e-102 377.1 250 78.4
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 1.4e-102 377.1 327 64.2
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 4.0e-102 375.6 264 75.4
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 4.0e-102 375.6 328 64.3
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.0e-100 370.9 330 64.2
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 4.9e-100 368.6 284 69.7
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 9.3e-99 364.4 292 68.2
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 9.3e-99 364.4 236 79.7
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 4.6e-98 362.1 238 76.5
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 2.5e-96 356.3 332 61.7
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 2.4e-94 349.7 326 59.2
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 2.2e-92 343.2 295 64.4
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.9e-92 342.8 250 70.8
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 2.9e-92 342.8 337 57.3
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 6.1e-90 335.1 331 57.7
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.1e-88 330.9 221 74.7
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.9e-88 330.1 235 71.9
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 2.5e-80 303.1 217 71.4
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 5.7e-80 302.0 221 72.4
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 4.1e-78 295.8 222 65.3
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 5.9e-77 292.0 256 62.9
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 1.9e-75 287.0 188 77.1
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 4.2e-75 285.8 330 50.6
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 9.7e-72 274.6 216 69.0
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 1.2e-69 267.7 260 52.3
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 1.2e-69 267.7 262 53.8
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 2.5e-67 260.0 262 57.6
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.4e-62 243.4 263 49.0
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.3e-62 242.3 249 55.4
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.3e-60 237.7 251 51.0
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.9e-59 233.8 328 43.3
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.7e-58 229.9 253 49.4
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 4.7e-50 202.6 251 42.2
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.6e-48 196.8 129 77.5
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 1.2e-42 177.9 246 42.3
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 6.8e-41 172.2 246 38.6
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 4.4e-40 169.5 125 68.0
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 3.2e-38 163.3 168 59.5
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 4.4e-24 116.3 244 31.1
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 6.4e-23 112.5 320 35.0
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 2.8e-18 97.1 259 30.9
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 1.3e-07 61.6 52 59.6
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 4.9e-07 59.7 32 93.8
Actinidia30278 Actinidia chinensis HOM05D005233 ORTHO05D006308 7.1e-06 55.8 73 56.2


User provided reference genes

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