Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 3.7e-73 278.1 140 100.0
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 7.6e-42 174.1 255 42.7
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 2.7e-39 165.6 255 42.4
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 3.5e-39 165.2 205 45.9
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 1.2e-31 140.2 255 36.1
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 1.0e-30 137.1 205 39.0
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 1.9e-29 132.9 206 39.3
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 1.6e-28 129.8 206 39.3
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 3.6e-28 128.6 201 41.3
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 1.1e-27 127.1 212 38.7
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 3.1e-27 125.6 205 41.0
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 9.0e-27 124.0 206 37.9
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 9.0e-27 124.0 207 38.6
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 2.0e-26 122.9 212 37.7
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 9.9e-26 120.6 206 39.8
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 9.9e-26 120.6 207 36.7
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 2.9e-25 119.0 206 37.4
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 2.9e-25 119.0 206 38.8
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 2.9e-25 119.0 206 36.9
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 4.9e-25 118.2 206 36.9
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 8.4e-25 117.5 206 35.9
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 1.4e-24 116.7 213 37.6
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 1.4e-24 116.7 203 35.0
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 1.9e-24 116.3 206 38.3
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 1.9e-24 116.3 206 38.3
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 1.9e-24 116.3 206 36.4
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 2.4e-24 115.9 206 34.5
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 3.2e-24 115.5 205 33.7
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 3.2e-24 115.5 206 34.5
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 4.2e-24 115.2 212 36.8
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 5.5e-24 114.8 205 34.6
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 5.5e-24 114.8 205 34.6
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 5.5e-24 114.8 206 35.9
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 7.1e-24 114.4 206 35.0
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 7.1e-24 114.4 169 41.4
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 1.2e-23 113.6 205 33.2
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 2.1e-23 112.8 206 33.5
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 3.5e-23 112.1 204 33.8
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 3.5e-23 112.1 206 34.0
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 3.5e-23 112.1 206 35.4
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.5e-23 112.1 192 38.5
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 3.5e-23 112.1 213 37.6
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 4.6e-23 111.7 206 35.4
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 4.6e-23 111.7 206 35.9
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 6.0e-23 111.3 205 37.1
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 6.0e-23 111.3 206 37.4
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 7.9e-23 110.9 212 34.9
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 1.0e-22 110.5 206 33.5
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 1.0e-22 110.5 206 33.5
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 1.3e-22 110.2 206 36.4
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 2.3e-22 109.4 206 35.9
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 3.0e-22 109.0 206 33.0
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 3.0e-22 109.0 206 33.0
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 3.0e-22 109.0 206 33.0
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 3.0e-22 109.0 213 36.2
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 3.0e-22 109.0 213 34.7
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.9e-22 108.6 192 38.0
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 8.7e-22 107.5 204 32.8
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 1.1e-21 107.1 206 34.5
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.1e-21 107.1 192 38.5
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 2.5e-21 105.9 206 35.0
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 4.3e-21 105.1 199 33.2
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 4.3e-21 105.1 206 32.0
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 5.6e-21 104.8 214 33.6
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 9.6e-21 104.0 207 36.2
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 9.6e-21 104.0 214 34.6
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 1.3e-20 103.6 206 31.6
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 2.8e-20 102.4 205 33.2
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 4.8e-20 101.7 204 32.8
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 4.8e-20 101.7 207 35.7
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 6.2e-20 101.3 205 31.2
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 1.1e-19 100.5 186 36.0
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 1.1e-19 100.5 201 32.8
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 1.4e-19 100.1 185 37.8
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 2.4e-19 99.4 200 32.0
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 5.3e-19 98.2 254 29.9
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 9.0e-19 97.4 231 29.4
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 1.2e-18 97.1 184 34.8
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 2.6e-18 95.9 206 33.0
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 2.6e-18 95.9 202 34.2
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 7.6e-18 94.4 207 33.8
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 1.0e-17 94.0 144 41.0
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 1.3e-17 93.6 140 42.9
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 2.2e-17 92.8 189 31.7
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 2.2e-17 92.8 202 33.7
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 3.8e-17 92.0 72 58.3
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 1.9e-16 89.7 200 30.5
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 2.5e-16 89.4 206 33.0
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 2.5e-16 89.4 191 33.0
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 5.5e-16 88.2 73 57.5
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 7.1e-16 87.8 194 32.0
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 9.3e-16 87.4 72 56.9
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.2e-15 87.0 72 56.9
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.2e-15 87.0 72 56.9
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 3.5e-15 85.5 72 55.6
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 4.6e-15 85.1 186 34.9
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 4.6e-15 85.1 81 51.9
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 1.8e-14 83.2 79 53.2
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 3.9e-14 82.0 73 52.1
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 5.1e-14 81.6 201 28.9
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 2.5e-13 79.3 177 30.5
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 1.3e-12 77.0 186 32.8
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 1.3e-12 77.0 177 33.9
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 1.4e-11 73.6 73 50.7
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 4.1e-11 72.0 56 58.9
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 8.5e-09 64.3 78 42.3
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 7.2e-08 61.2 53 54.7
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 2.3e-06 56.2 53 54.7


User provided reference genes

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