Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03965 Beta vulgaris HOM05D008388 ORTHO05D000309 1.4e-72 276.2 135 100.0
EL10Ac7g16399 Beta vulgaris HOM05D008388 ORTHO05D000309 1.2e-68 263.1 135 95.6
EL10Ac2g03745 Beta vulgaris HOM05D008388 ORTHO05D000309 7.3e-66 253.8 142 88.7
EL10As8g23853 Beta vulgaris HOM05D008388 ORTHO05D000309 8.6e-59 230.3 115 95.7
EL10Ac2g03864 Beta vulgaris HOM05D000060 ORTHO05D000309 7.3e-50 200.7 122 82.8
Ah.13g069370 Amaranthus hybridus HOM05D008388 ORTHO05D000309 1.8e-16 89.7 105 40.0
Ah.02g111520 Amaranthus hybridus HOM05D008388 ORTHO05D000309 2.4e-16 89.4 104 42.3
Ah.03g139560 Amaranthus hybridus HOM05D008388 ORTHO05D000309 3.1e-16 89.0 106 42.5
Ah.01g011000 Amaranthus hybridus HOM05D008388 ORTHO05D000309 6.9e-16 87.8 108 40.7
Ah.11g043710 Amaranthus hybridus HOM05D008388 ORTHO05D000309 6.9e-16 87.8 104 40.4
EL10Ac3g07074 Beta vulgaris HOM05D008388 ORTHO05D000309 9.0e-16 87.4 78 47.4
AUR62030200 Chenopodium quinoa HOM05D008388 ORTHO05D000309 4.5e-15 85.1 77 45.5
AUR62041031 Chenopodium quinoa HOM05D008388 ORTHO05D000309 4.5e-15 85.1 119 38.7
EL10Ac8g18852 Beta vulgaris HOM05D008388 ORTHO05D000309 5.8e-15 84.7 104 37.5
EL10Ac9g22366 Beta vulgaris HOM05D008388 ORTHO05D000309 9.9e-15 84.0 102 36.3
EL10Ac5g12256 Beta vulgaris HOM05D008388 ORTHO05D000309 1.3e-14 83.6 102 36.3
EL10Ac9g22677 Beta vulgaris HOM05D008388 ORTHO05D000309 1.7e-14 83.2 127 34.6
EL10Ac5g11999 Beta vulgaris HOM05D008388 ORTHO05D000309 2.2e-14 82.8 127 34.6
AUR62014271 Chenopodium quinoa HOM05D008388 ORTHO05D000309 2.9e-14 82.4 59 59.3
EL10Ac2g02861 Beta vulgaris HOM05D008388 ORTHO05D000309 3.8e-14 82.0 136 35.3
AUR62006272 Chenopodium quinoa HOM05D008388 ORTHO05D000309 3.8e-14 82.0 82 46.3
Ah.04g159280 Amaranthus hybridus HOM05D008388 ORTHO05D000309 1.1e-13 80.5 66 50.0
BcaB02g11020 Brassica carinata HOM05D007774 ORTHO05D000309 5.5e-13 78.2 83 42.2
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 1.2e-12 77.0 92 41.3
BcaC01g02494 Brassica carinata HOM05D009173 ORTHO05D000309 1.6e-12 76.6 82 39.0
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 2.1e-12 76.3 96 41.7
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 2.1e-12 76.3 96 41.7
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 3.5e-12 75.5 92 41.3
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 3.5e-12 75.5 92 41.3
EL10Ac3g05389 Beta vulgaris HOM05D008388 ORTHO05D000309 4.6e-12 75.1 71 47.9
EL10Ac1g02302 Beta vulgaris HOM05D008388 ORTHO05D000309 7.9e-12 74.3 81 38.3
EL10As2g23249 Beta vulgaris HOM05D008388 ORTHO05D000309 7.9e-12 74.3 64 50.0
EL10Ac7g16617 Beta vulgaris HOM05D008388 ORTHO05D000309 1.0e-11 73.9 100 38.0
EL10Ac8g18741 Beta vulgaris HOM05D008388 ORTHO05D000309 1.0e-11 73.9 100 38.0
AUR62035936 Chenopodium quinoa HOM05D008388 ORTHO05D000309 1.0e-11 73.9 130 37.7
BcaB05g22492 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-11 73.6 93 38.7
BcaB05g22493 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-11 73.6 93 38.7
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-11 73.6 92 41.3
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-11 73.2 100 38.0
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 2.3e-11 72.8 94 38.3
EL10As6g23642 Beta vulgaris HOM05D053258 ORTHO05D000880 3.9e-11 72.0 40 67.5
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 5.1e-11 71.6 96 37.5
EL10Ac5g10607 Beta vulgaris HOM05D008388 ORTHO05D000309 6.7e-11 71.2 121 33.9
EL10Ac6g14557 Beta vulgaris HOM05D007123 ORTHO05D000309 6.7e-11 71.2 98 34.7
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 6.7e-11 71.2 79 40.5
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-10 70.5 89 38.2
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-10 70.5 93 38.7
BolC8t49307H Brassica oleracea HOM05D007774 ORTHO05D000309 1.1e-10 70.5 83 42.2
EL10Ac9g22515 Beta vulgaris HOM05D008388 ORTHO05D000309 1.5e-10 70.1 41 92.7
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 1.5e-10 70.1 81 39.5
EL10Ac2g03415 Beta vulgaris HOM05D008388 ORTHO05D000309 3.3e-10 68.9 106 34.0
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-10 68.9 77 41.6
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-10 68.9 75 42.7
Nitab4.5_0000216g0400 Nicotiana tabacum HOM05D001383 ORTHO05D000309 4.3e-10 68.6 80 42.5
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 5.6e-10 68.2 96 35.4
EL10As2g23187 Beta vulgaris HOM05D008388 ORTHO05D000309 7.4e-10 67.8 71 46.5
BcaB05g23917 Brassica carinata HOM05D007774 ORTHO05D000309 7.4e-10 67.8 102 38.2
C09p37560 Brassica napus HOM05D008073 ORTHO05D000309 7.4e-10 67.8 99 37.4
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 9.6e-10 67.4 96 35.4
EL10Ac4g08343 Beta vulgaris HOM05D008388 ORTHO05D000309 1.3e-09 67.0 74 39.2
BcaC01g02366 Brassica carinata HOM05D009173 ORTHO05D000309 1.3e-09 67.0 86 32.6
BolC3t18879H Brassica oleracea HOM05D009173 ORTHO05D000309 1.3e-09 67.0 86 32.6
Lsat_1_v5_gn_8_86741 Lactuca sativa HOM05D009585 ORTHO05D000309 1.3e-09 67.0 61 45.9
BcaC07g38082 Brassica carinata HOM05D009173 ORTHO05D000309 1.6e-09 66.6 112 32.1
EL10Ac7g17256 Beta vulgaris HOM05D008388 ORTHO05D000309 2.1e-09 66.2 74 39.2
EL10Ac8g19761 Beta vulgaris HOM05D008388 ORTHO05D000309 2.8e-09 65.9 74 39.2
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 2.8e-09 65.9 73 39.7
AUR62014141 Chenopodium quinoa HOM05D008388 ORTHO05D000309 2.8e-09 65.9 79 40.5
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 2.8e-09 65.9 83 34.9
BcaC04g20956 Brassica carinata HOM05D008073 ORTHO05D000309 4.8e-09 65.1 94 35.1
BolC9t56587H Brassica oleracea HOM05D008073 ORTHO05D000309 4.8e-09 65.1 94 35.1
Lsat_1_v5_gn_3_24321 Lactuca sativa HOM05D009585 ORTHO05D000309 4.8e-09 65.1 61 44.3
Nitab4.5_0002335g0050 Nicotiana tabacum HOM05D001383 ORTHO05D000309 4.8e-09 65.1 84 41.7
EL10Ac5g11137 Beta vulgaris HOM05D008388 ORTHO05D000309 6.2e-09 64.7 135 32.6
EL10Ac5g12444 Beta vulgaris HOM05D008388 ORTHO05D000309 6.2e-09 64.7 135 32.6
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 6.2e-09 64.7 77 32.5
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 6.2e-09 64.7 82 32.9
Nitab4.5_0000115g0400 Nicotiana tabacum HOM05D001383 ORTHO05D000309 6.2e-09 64.7 73 45.2
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 8.2e-09 64.3 88 43.2
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 8.2e-09 64.3 81 35.8
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 8.2e-09 64.3 80 35.0
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 8.2e-09 64.3 80 35.0
BraA09t38926Z Brassica rapa HOM05D009173 ORTHO05D000309 8.2e-09 64.3 113 31.9
BcaC08g43001 Brassica carinata HOM05D009173 ORTHO05D000309 1.1e-08 63.9 81 33.3
Lsat_1_v5_gn_2_57141 Lactuca sativa HOM05D009585 ORTHO05D000309 1.4e-08 63.5 61 44.3
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-08 63.2 77 32.5
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-08 63.2 77 32.5
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-08 63.2 77 32.5
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-08 63.2 77 32.5
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-08 63.2 77 32.5
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-08 63.2 96 34.4
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-08 62.8 81 42.0
Lsat_1_v5_gn_3_72860 Lactuca sativa HOM05D009585 ORTHO05D000309 2.4e-08 62.8 61 44.3
BcaB03g15391 Brassica carinata HOM05D009173 ORTHO05D000309 3.1e-08 62.4 79 36.7
Ah.03g141040 Amaranthus hybridus HOM05D001173 ORTHO05D001047 5.3e-08 61.6 49 49.0
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 5.3e-08 61.6 79 31.6
Lsat_1_v5_gn_4_139581 Lactuca sativa HOM05D009585 ORTHO05D000309 6.9e-08 61.2 69 39.1
Nitab4.5_0007977g0060 Nicotiana tabacum HOM05D001383 ORTHO05D000309 6.9e-08 61.2 73 43.8
BcaB01g01569 Brassica carinata HOM05D009173 ORTHO05D000309 9.0e-08 60.8 75 36.0
BcaC04g23317 Brassica carinata HOM05D009173 ORTHO05D000309 9.0e-08 60.8 79 31.6
Lsat_1_v5_gn_1_123660 Lactuca sativa HOM05D009585 ORTHO05D000309 9.0e-08 60.8 81 35.8
Lsat_1_v5_gn_5_164901 Lactuca sativa HOM05D009585 ORTHO05D000309 9.0e-08 60.8 81 35.8
Lsat_1_v5_gn_8_39100 Lactuca sativa HOM05D009585 ORTHO05D000309 9.0e-08 60.8 81 35.8
Lsat_1_v5_gn_8_440 Lactuca sativa HOM05D009585 ORTHO05D000309 9.0e-08 60.8 81 35.8
Peaxi162Scf00429g00041 Petunia axillaris HOM05D008741 ORTHO05D010787 9.0e-08 60.8 134 34.3
Sp5g12640 Schrenkiella parvula HOM05D009173 ORTHO05D000309 9.0e-08 60.8 135 30.4
AUR62036087 Chenopodium quinoa HOM05D019594 ORTHO05D000309 1.2e-07 60.5 62 45.2
Lsat_1_v5_gn_1_30700 Lactuca sativa HOM05D009585 ORTHO05D013076 1.2e-07 60.5 81 35.8
BolC5t33238H Brassica oleracea HOM05D007774 ORTHO05D000309 1.5e-07 60.1 55 50.9
BolC9t53939H Brassica oleracea HOM05D007774 ORTHO05D000309 2.0e-07 59.7 49 53.1
AUR62013972 Chenopodium quinoa HOM05D008388 ORTHO05D000309 2.0e-07 59.7 127 29.1
Eucgr.E03636 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.0e-07 59.7 77 45.5
C06p11380 Brassica napus HOM05D009173 ORTHO05D027589 2.6e-07 59.3 78 38.5
Eucgr.L02571 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.6e-07 59.3 77 45.5
AUR62036681 Chenopodium quinoa HOM05D008388 ORTHO05D000309 3.4e-07 58.9 127 31.5
CAN.G546.55 Capsicum annuum HOM05D008741 ORTHO05D010787 4.5e-07 58.5 75 41.3
Eucgr.A00047 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.5e-07 58.5 77 45.5
Nitab4.5_0002043g0110 Nicotiana tabacum HOM05D001383 ORTHO05D000309 4.5e-07 58.5 66 42.4
BcaB01g00830 Brassica carinata HOM05D008073 ORTHO05D000309 5.8e-07 58.2 100 36.0
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 5.8e-07 58.2 77 36.4
Atru.chr9.1876 Acer truncatum HOM05D001383 ORTHO05D000309 7.6e-07 57.8 116 31.0
BcaB05g23793 Brassica carinata HOM05D007774 ORTHO05D000309 7.6e-07 57.8 107 33.6
DCAR_030173 Daucus carota HOM05D001383 ORTHO05D000309 7.6e-07 57.8 76 36.8
Peaxi162Scf00446g00005 Petunia axillaris HOM05D001383 ORTHO05D000309 7.6e-07 57.8 71 39.4
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 1.0e-06 57.4 77 32.5
Lsat_1_v5_gn_8_123281 Lactuca sativa HOM05D009585 ORTHO05D000309 1.0e-06 57.4 110 28.2
Nitab4.5_0003987g0040 Nicotiana tabacum HOM05D001383 ORTHO05D000309 1.0e-06 57.4 66 40.9
Peaxi162Scf00084g01219 Petunia axillaris HOM05D001383 ORTHO05D000309 1.0e-06 57.4 79 35.4
C06p04030 Brassica napus HOM05D012943 ORTHO05D039056 1.3e-06 57.0 70 37.1
CAN.G126.3 Capsicum annuum HOM05D008741 ORTHO05D010787 1.3e-06 57.0 74 39.2
Eucgr.L02287 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.3e-06 57.0 109 37.6
Lsat_1_v5_gn_6_64401 Lactuca sativa HOM05D009585 ORTHO05D000309 1.3e-06 57.0 69 36.2
Nitab4.5_0000101g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.3e-06 57.0 70 40.0
Nitab4.5_0007325g0010 Nicotiana tabacum HOM05D001383 ORTHO05D000309 1.3e-06 57.0 84 36.9
Sp5g18110 Schrenkiella parvula HOM05D009173 ORTHO05D000309 1.3e-06 57.0 77 37.7
Eucgr.B01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.7e-06 56.6 77 45.5
Lj2C893T6 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-06 56.6 128 32.0
Nitab4.5_0000463g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.7e-06 56.6 82 35.4
Peaxi162Scf00578g00524 Petunia axillaris HOM05D001383 ORTHO05D000309 1.7e-06 56.6 87 33.3
BcaC05g26851 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-06 56.2 71 33.8
BolC6t36277H Brassica oleracea HOM05D009173 ORTHO05D027589 2.2e-06 56.2 77 36.4
Lsat_1_v5_gn_6_60401 Lactuca sativa HOM05D009585 ORTHO05D000309 2.2e-06 56.2 110 28.2
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.2e-06 56.2 85 36.5
Lsat_1_v5_gn_6_56121 Lactuca sativa HOM05D009289 ORTHO05D000309 2.9e-06 55.8 49 44.9
Lj3P53T19 Lonicera japonica HOM05D008126 ORTHO05D000309 2.9e-06 55.8 128 32.0
Lj4P758T63 Lonicera japonica HOM05D008126 ORTHO05D000309 2.9e-06 55.8 128 32.0
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 2.9e-06 55.8 76 34.2
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 2.9e-06 55.8 91 34.1
BcaC08g43767 Brassica carinata HOM05D009173 ORTHO05D000309 3.8e-06 55.5 78 35.9
CAN.G183.6 Capsicum annuum HOM05D008741 ORTHO05D010787 3.8e-06 55.5 75 38.7
COL.COLO4_10433 Corchorus olitorius HOM05D023691 ORTHO05D000309 3.8e-06 55.5 77 39.0
Eucgr.C02166 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.8e-06 55.5 77 44.2
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.8e-06 55.5 85 37.6
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 3.8e-06 55.5 91 36.3
BcaB02g11208 Brassica carinata HOM05D007774 ORTHO05D000309 4.9e-06 55.1 77 29.9
DCAR_029331 Daucus carota HOM05D001383 ORTHO05D000309 4.9e-06 55.1 77 35.1
Lsat_1_v5_gn_3_96901 Lactuca sativa HOM05D009585 ORTHO05D000309 4.9e-06 55.1 110 27.3
Nitab4.5_0000256g0020 Nicotiana tabacum HOM05D001383 ORTHO05D000309 4.9e-06 55.1 73 43.8
Nitab4.5_0001650g0110 Nicotiana tabacum HOM05D001383 ORTHO05D000309 4.9e-06 55.1 66 40.9
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.9e-06 55.1 85 36.5
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 4.9e-06 55.1 76 34.2
arahy.Tifrunner.gnm1.ann1.DG6XDV Arachis hypogaea HOM05D029393 ORTHO05D000309 6.5e-06 54.7 80 36.2
arahy.Tifrunner.gnm1.ann1.QSEK4V Arachis hypogaea HOM05D029393 ORTHO05D000309 6.5e-06 54.7 80 36.2
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 6.5e-06 54.7 79 26.6
COL.COLO4_15560 Corchorus olitorius HOM05D015200 ORTHO05D000309 6.5e-06 54.7 78 34.6
Eucgr.J01886 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.5e-06 54.7 50 48.0
Nitab4.5_0002145g0050 Nicotiana tabacum HOM05D001383 ORTHO05D000309 6.5e-06 54.7 72 40.3
Nitab4.5_0007534g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.5e-06 54.7 112 35.7
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.5e-06 54.7 69 40.6
BcaC06g36745 Brassica carinata HOM05D008073 ORTHO05D031794 8.4e-06 54.3 74 35.1
COL.COLO4_06499 Corchorus olitorius HOM05D015200 ORTHO05D000309 8.4e-06 54.3 78 34.6
Nitab4.5_0000625g0090 Nicotiana tabacum HOM05D001383 ORTHO05D000309 8.4e-06 54.3 66 39.4
Nitab4.5_0001288g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.4e-06 54.3 86 36.0
Nitab4.5_0008808g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.4e-06 54.3 75 36.0


User provided reference genes

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