Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 8.9e-108 393.7 204 100.0
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 3.5e-104 381.7 204 97.1
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 1.6e-69 266.5 172 80.8
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 4.4e-67 258.5 200 69.0
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 3.4e-59 232.3 205 64.4
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 3.8e-58 228.8 142 82.4
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 1.6e-56 223.4 142 81.0
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 5.1e-55 218.4 209 60.3
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 1.1e-54 217.2 178 67.4
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 1.1e-54 217.2 211 60.7
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 5.6e-54 214.9 201 61.7
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 1.3e-53 213.8 212 59.9
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 1.3e-53 213.8 197 62.4
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 2.1e-53 213.0 181 66.9
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 3.7e-53 212.2 207 58.9
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 4.8e-53 211.8 177 66.1
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 8.1e-53 211.1 184 62.0
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 3.1e-52 209.1 173 66.5
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 1.2e-51 207.2 176 66.5
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 2.0e-51 206.5 157 70.1
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 2.6e-51 206.1 186 60.2
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 4.5e-51 205.3 157 69.4
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 1.0e-50 204.1 181 61.9
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 1.7e-50 203.4 178 62.9
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.7e-50 203.4 157 69.4
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 1.7e-50 203.4 196 58.7
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 2.2e-50 203.0 206 58.3
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 8.4e-50 201.1 213 57.7
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.1e-49 200.7 212 56.1
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 1.4e-49 200.3 176 63.6
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 3.2e-49 199.1 173 65.3
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 4.2e-49 198.7 212 56.6
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 5.5e-49 198.4 195 54.4
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 9.3e-49 197.6 173 63.6
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 9.3e-49 197.6 171 63.7
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 1.6e-48 196.8 154 69.5
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 2.7e-48 196.1 178 62.4
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 6.0e-48 194.9 171 64.3
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 7.9e-48 194.5 182 60.4
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 7.9e-48 194.5 182 60.4
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 1.3e-47 193.7 137 73.0
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 1.3e-47 193.7 195 59.5
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 1.3e-47 193.7 160 66.2
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 1.8e-47 193.4 154 68.2
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 1.8e-47 193.4 181 60.2
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 1.8e-47 193.4 204 57.4
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 1.8e-47 193.4 177 60.5
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 1.8e-47 193.4 177 62.7
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.3e-47 193.0 182 59.9
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 3.0e-47 192.6 162 64.2
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 3.0e-47 192.6 178 62.4
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 3.9e-47 192.2 175 61.1
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 5.1e-47 191.8 173 61.8
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 6.7e-47 191.4 132 74.2
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 6.7e-47 191.4 166 63.3
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 6.7e-47 191.4 174 60.9
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 6.7e-47 191.4 182 58.2
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 6.7e-47 191.4 160 65.6
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 8.7e-47 191.0 166 63.9
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 1.1e-46 190.7 137 72.3
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 1.5e-46 190.3 128 76.6
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 3.3e-46 189.1 128 75.8
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 3.3e-46 189.1 166 63.9
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 4.3e-46 188.7 178 61.8
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 4.3e-46 188.7 154 68.2
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 5.7e-46 188.3 166 63.3
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 1.3e-45 187.2 210 53.8
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 2.1e-45 186.4 167 60.5
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.1e-45 186.4 153 64.1
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 3.7e-45 185.7 162 63.0
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 3.7e-45 185.7 171 63.2
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 4.8e-45 185.3 179 60.3
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 4.8e-45 185.3 178 59.6
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 8.2e-45 184.5 171 60.8
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 1.4e-44 183.7 176 60.8
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 1.8e-44 183.3 166 63.9
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 1.8e-44 183.3 132 69.7
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 2.4e-44 183.0 178 59.6
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 3.1e-44 182.6 177 59.3
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 4.1e-44 182.2 160 61.9
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 5.3e-44 181.8 137 70.8
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 6.9e-44 181.4 177 60.5
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 1.2e-43 180.6 176 60.2
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 1.5e-43 180.3 199 54.8
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 2.6e-43 179.5 178 58.4
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 7.6e-43 177.9 138 66.7
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.0e-42 177.6 137 67.9
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 2.2e-42 176.4 129 67.4
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 2.2e-42 176.4 175 59.4
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 6.5e-42 174.9 174 55.7
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 6.5e-42 174.9 173 57.2
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 5.5e-41 171.8 129 67.4
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 9.3e-41 171.0 191 52.9
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 1.6e-40 170.2 132 64.4
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 7.9e-40 167.9 199 53.3
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 3.9e-39 165.6 134 67.2
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 1.9e-38 163.3 128 68.0
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 1.8e-36 156.8 159 54.7
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 2.4e-36 156.4 186 51.6
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 4.2e-33 145.6 101 73.3
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 9.7e-30 134.4 159 47.2
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 1.7e-29 133.7 151 46.4
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 2.8e-29 132.9 114 64.0
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 5.3e-28 128.6 146 45.9
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 7.7e-27 124.8 133 48.9
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 6.5e-26 121.7 103 60.2
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 2.6e-22 109.8 92 63.0
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 6.5e-18 95.1 70 68.6
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 1.8e-15 87.0 92 51.1


User provided reference genes

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