Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03874 Beta vulgaris HOM05D005902 ORTHO05D007182 3.1e-107 391.7 190 100.0
Hund03335 Selenicereus undatus HOM05D005902 ORTHO05D007182 3.5e-98 361.7 190 90.0
AUR62039116 Chenopodium quinoa HOM05D005902 ORTHO05D007182 5.9e-98 360.9 190 91.6
AUR62009143 Chenopodium quinoa HOM05D005902 ORTHO05D007182 1.3e-97 359.8 190 92.1
CiPaw.03G078000 Carya illinoinensis HOM05D005902 ORTHO05D007182 2.7e-90 335.5 190 83.2
VMungo0647G1816 Vigna mungo HOM05D005902 ORTHO05D007182 2.7e-90 335.5 189 82.0
Lj2A514T43 Lonicera japonica HOM05D005902 ORTHO05D007182 5.9e-90 334.3 190 82.6
BcaC08g46080 Brassica carinata HOM05D005902 ORTHO05D007182 1.0e-89 333.6 191 83.2
BolC6t39030H Brassica oleracea HOM05D005902 ORTHO05D007182 1.0e-89 333.6 191 83.2
Medtr5g077260 Medicago truncatula HOM05D005902 ORTHO05D007182 1.7e-89 332.8 191 81.7
CAN.G1464.8 Capsicum annuum HOM05D005902 ORTHO05D007182 2.3e-89 332.4 190 82.1
Ca_05775_v3 Cicer arietinum L. HOM05D005902 ORTHO05D007182 2.3e-89 332.4 191 82.7
Cc07_g13000 Coffea canephora HOM05D005902 ORTHO05D007182 2.3e-89 332.4 191 83.2
Haze_14303 Corylus avellana HOM05D005902 ORTHO05D007182 2.3e-89 332.4 190 81.6
SalBow5G2060 Salvia bowleyana HOM05D005902 ORTHO05D007182 2.3e-89 332.4 190 82.6
C06p39370 Brassica napus HOM05D005902 ORTHO05D007182 2.9e-89 332.0 191 82.7
Nitab4.5_0017196g0010 Nicotiana tabacum HOM05D005902 ORTHO05D007182 2.9e-89 332.0 190 82.1
MSTRG.3687 Avicennia marina HOM05D005902 ORTHO05D007182 3.9e-89 331.6 191 82.7
A07p33100 Brassica napus HOM05D005902 ORTHO05D007182 3.9e-89 331.6 191 82.7
MELO3C023753.2 Cucumis melo HOM05D005902 ORTHO05D007182 3.9e-89 331.6 190 83.7
Glyma.02G242000 Glycine max HOM05D005902 ORTHO05D007182 3.9e-89 331.6 187 81.8
Glyma.14G211800 Glycine max HOM05D005902 ORTHO05D007182 3.9e-89 331.6 187 81.8
TWI53G1594 Tripterygium wilfordii HOM05D005902 ORTHO05D007182 3.9e-89 331.6 191 83.8
Nn3g18467 Nelumbo nucifera HOM05D005902 ORTHO05D007182 5.0e-89 331.3 191 82.7
PGR031G2550 Punica granatum HOM05D005902 ORTHO05D007182 5.0e-89 331.3 191 82.2
Phvul.008G239100 Phaseolus vulgaris HOM05D005902 ORTHO05D007182 6.6e-89 330.9 190 81.1
TPR.G9985 Trifolium pratense HOM05D005902 ORTHO05D007182 6.6e-89 330.9 191 82.7
CsaV3_3G020300 Cucumis sativus L. HOM05D005902 ORTHO05D007182 1.1e-88 330.1 190 83.2
GSVIVG01026316001 Vitis vinifera HOM05D005902 ORTHO05D007182 1.1e-88 330.1 191 80.6
Ciclev10005984m.g Citrus clementina HOM05D005902 ORTHO05D007182 1.5e-88 329.7 191 82.2
BraA07t30938Z Brassica rapa HOM05D005902 ORTHO05D007182 1.9e-88 329.3 191 82.2
Nitab4.5_0000905g0130 Nicotiana tabacum HOM05D005902 ORTHO05D007182 1.9e-88 329.3 190 81.6
Oeu009432.1 Olea europaea HOM05D005902 ORTHO05D007182 1.9e-88 329.3 192 82.8
Solyc05g056560.3 Solanum lycopersicum HOM05D005902 ORTHO05D007182 1.9e-88 329.3 190 81.6
Sopen05g034960 Solanum pennellii HOM05D005902 ORTHO05D007182 1.9e-88 329.3 190 81.6
arahy.Tifrunner.gnm1.ann1.00Q11I Arachis hypogaea HOM05D005902 ORTHO05D007182 2.5e-88 328.9 191 81.2
arahy.Tifrunner.gnm1.ann1.YJU2T0 Arachis hypogaea HOM05D005902 ORTHO05D007182 2.5e-88 328.9 191 81.7
MSTRG.15644 Avicennia marina HOM05D005902 ORTHO05D007182 2.5e-88 328.9 191 81.7
Cfa007771 Carpinus fangiana HOM05D005902 ORTHO05D007182 3.3e-88 328.6 190 81.1
Lalb_Chr10g0104081 Lupinus albus HOM05D005902 ORTHO05D007182 3.3e-88 328.6 193 80.3
RcHm_v2.0_Chr3g0493321 Rosa chinensis HOM05D005902 ORTHO05D007182 3.3e-88 328.6 190 81.1
Peaxi162Scf00525g00623 Petunia axillaris HOM05D005902 ORTHO05D007182 4.3e-88 328.2 189 82.0
DCAR_010066 Daucus carota HOM05D005902 ORTHO05D007182 5.6e-88 327.8 190 83.2
Rhsim08G0020200 Rhododendron simsii HOM05D005902 ORTHO05D007182 7.3e-88 327.4 191 81.7
PGSC0003DMG400023318 Solanum tuberosum HOM05D005902 ORTHO05D007182 7.3e-88 327.4 190 81.6
BcaB05g24153 Brassica carinata HOM05D005902 ORTHO05D007182 1.2e-87 326.6 191 81.2
Duzib187G0521 Durio zibethinus HOM05D005902 ORTHO05D007182 1.2e-87 326.6 191 83.2
Thhalv10019182m.g Eutrema salsugineum HOM05D005902 ORTHO05D007182 1.2e-87 326.6 191 80.6
Thecc.01G244600 Theobroma cacao HOM05D005902 ORTHO05D007182 1.2e-87 326.6 191 82.7
vmacro18518 Vaccinium macrocarpon HOM05D005902 ORTHO05D007182 1.2e-87 326.6 191 81.2
MD17G1258000 Malus domestica HOM05D005902 ORTHO05D007182 1.6e-87 326.2 189 80.4
Manes.05G062600 Manihot esculenta HOM05D005902 ORTHO05D007182 1.6e-87 326.2 191 81.2
Oeu048966.1 Olea europaea HOM05D005902 ORTHO05D007182 2.1e-87 325.9 192 82.3
PSO063G5475 Papaver somniferum HOM05D005902 ORTHO05D007182 2.1e-87 325.9 191 80.6
AL2G23690 Arabidopsis lyrata HOM05D005902 ORTHO05D007182 2.8e-87 325.5 191 80.1
A02p13450 Brassica napus HOM05D005902 ORTHO05D007182 2.8e-87 325.5 191 81.2
BraA02t06403Z Brassica rapa HOM05D005902 ORTHO05D007182 2.8e-87 325.5 191 81.2
Lsat_1_v5_gn_8_111480 Lactuca sativa HOM05D005902 ORTHO05D007182 2.8e-87 325.5 192 81.2
AT1G66080 Arabidopsis thaliana HOM05D005902 ORTHO05D007182 3.6e-87 325.1 191 80.1
CSS0022144 Camellia sinensis var. sinensis HOM05D005902 ORTHO05D007182 3.6e-87 325.1 191 80.6
LjContig00141g0001362 Lotus japonicus HOM05D005902 ORTHO05D007182 4.7e-87 324.7 192 80.2
Psat2g044640 Pisum sativum HOM05D005902 ORTHO05D007182 4.7e-87 324.7 191 80.6
BcaB03g15295 Brassica carinata HOM05D005902 ORTHO05D007182 6.1e-87 324.3 190 81.6
C02p21750 Brassica napus HOM05D005902 ORTHO05D007182 6.1e-87 324.3 191 80.6
TWI74G1040 Tripterygium wilfordii HOM05D005902 ORTHO05D007182 6.1e-87 324.3 190 81.1
Aa31LG2G2820 Aethionema arabicum HOM05D005902 ORTHO05D007182 1.4e-86 323.2 191 80.1
CARHR058040 Cardamine hirsuta HOM05D005902 ORTHO05D007182 1.4e-86 323.2 191 79.6
Lalb_Chr17g0345911 Lupinus albus HOM05D005902 ORTHO05D007182 1.4e-86 323.2 193 77.7
ClCG05G012140 Citrullus lanatus HOM05D005902 ORTHO05D007182 1.8e-86 322.8 190 81.1
Carub.0002s1207 Capsella rubella HOM05D005902 ORTHO05D007182 3.1e-86 322.0 191 79.6
HanXRQChr09g0259821 Helianthus annuus HOM05D005902 ORTHO05D007182 3.1e-86 322.0 192 81.2
Aqoxy3G04009 Aquilegia oxysepala HOM05D005902 ORTHO05D007182 4.0e-86 321.6 191 78.0
FAN26G1601 Fragaria x ananassa HOM05D005902 ORTHO05D007182 4.0e-86 321.6 190 79.5
PSO782G1752 Papaver somniferum HOM05D005902 ORTHO05D007182 4.0e-86 321.6 191 80.6
MD09G1263000 Malus domestica HOM05D005902 ORTHO05D007182 5.2e-86 321.2 190 78.4
FAN19G0020 Fragaria x ananassa HOM05D005902 ORTHO05D007182 6.8e-86 320.9 190 79.5
Hma1.2p1_0158F.1_g069840 Hydrangea macrophylla HOM05D005902 ORTHO05D007182 6.8e-86 320.9 190 80.0
QL02p060024 Quercus lobata HOM05D005902 ORTHO05D007182 6.8e-86 320.9 188 79.3
SGA_v2.0_scaffold45G17133 Striga asiatica HOM05D005902 ORTHO05D007182 8.9e-86 320.5 191 79.6
Actinidia35717 Actinidia chinensis HOM05D005902 ORTHO05D007182 1.5e-85 319.7 190 78.4
FAN28G1805 Fragaria x ananassa HOM05D005902 ORTHO05D007182 1.5e-85 319.7 190 78.9
Gohir.D12G002400 Gossypium hirsutum HOM05D005902 ORTHO05D007182 1.5e-85 319.7 191 81.7
Prupe.3G160700 Prunus persica HOM05D005902 ORTHO05D007182 2.6e-85 318.9 190 78.9
THA.LOC104822070 Tarenaya hassleriana HOM05D005902 ORTHO05D007182 3.4e-85 318.5 192 77.1
Dinv28227 Davidia involucrata HOM05D005902 ORTHO05D007182 4.4e-85 318.2 191 79.1
MBI13_g21692_MAGBIO Magnolia biondii HOM05D005902 ORTHO05D007182 5.8e-85 317.8 191 78.5
TAR371G0118 Trochodendron aralioides HOM05D005902 ORTHO05D007182 5.8e-85 317.8 191 78.0
Gohir.A12G002700 Gossypium hirsutum HOM05D005902 ORTHO05D007182 1.3e-84 316.6 191 80.6
Duzib264G0381 Durio zibethinus HOM05D005902 ORTHO05D007182 2.2e-84 315.8 191 80.1
Sc09g0004530 Simmondsia chinensis HOM05D005902 ORTHO05D007182 2.2e-84 315.8 193 77.7
unitig_748.g7250 Utricularia gibba HOM05D005902 ORTHO05D007182 2.9e-84 315.5 188 78.2
CANSAT80G0886 Cannabis sativa HOM05D005902 ORTHO05D007182 4.9e-84 314.7 193 76.7
Cpa.g.sc178.4 Carica papaya HOM05D005902 ORTHO05D007182 6.4e-84 314.3 190 78.4
Sed0000187 Sechium edule HOM05D005902 ORTHO05D007182 6.4e-84 314.3 190 77.4
Migut.K01111 Erythranthe guttata HOM05D005902 ORTHO05D007182 8.3e-84 313.9 191 78.0
Potri.004G082100 Populus trichocarpa HOM05D005902 ORTHO05D007182 1.1e-83 313.5 191 77.5
Gorai.008G001800 Gossypium raimondii HOM05D005902 ORTHO05D007182 2.4e-83 312.4 186 81.7
Atru.chr1.1947 Acer truncatum HOM05D005902 ORTHO05D007182 5.4e-83 311.2 191 77.0
ECA240G4510 Erigeron canadensis HOM05D005902 ORTHO05D007182 2.7e-82 308.9 194 75.8
Sabra04G0054600 Salix brachista HOM05D005902 ORTHO05D007182 6.0e-82 307.8 191 75.9
COL.COLO4_08161 Corchorus olitorius HOM05D005902 ORTHO05D007182 5.0e-81 304.7 178 81.5
Ah.10g034300 Amaranthus hybridus HOM05D005902 ORTHO05D007182 6.6e-81 304.3 156 93.6
Sed0027099 Sechium edule HOM05D005902 ORTHO05D007182 1.5e-80 303.1 190 77.4
CDE05G1035 Ceratophyllum demersum HOM05D005902 ORTHO05D007182 2.5e-80 302.4 190 73.7
CDE05G2622 Ceratophyllum demersum HOM05D005902 ORTHO05D007182 1.2e-79 300.1 190 73.2
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 8.1e-79 297.4 190 75.3
ATR0598G055 Amborella trichopoda HOM05D005902 ORTHO05D007182 4.0e-78 295.0 190 72.6
AagrBONN_evm.TU.Sc2ySwM_344.787 Anthoceros agrestis HOM05D005902 ORTHO05D007182 5.6e-72 274.6 191 68.1
Sp5g21150 Schrenkiella parvula HOM05D005902 ORTHO05D007182 1.8e-70 269.6 158 81.0
Pp3c27_3020 Physcomitrium patens HOM05D005902 ORTHO05D007182 5.8e-69 264.6 191 66.0
Mapoly0006s0187 Marchantia polymorpha HOM05D005902 ORTHO05D007182 4.9e-68 261.5 190 66.3
SMO278G0026 Selaginella moellendorffii HOM05D005902 ORTHO05D007182 6.4e-68 261.2 189 64.0
TAR629G3091 Trochodendron aralioides HOM05D005902 ORTHO05D007182 4.1e-67 258.5 158 78.5
Pp3c16_2230 Physcomitrium patens HOM05D005902 ORTHO05D007182 6.0e-66 254.6 191 65.4
FvH4_1g28840 Fragaria vesca HOM05D005902 ORTHO05D007182 5.2e-62 241.5 147 78.9
CSS0046217 Camellia sinensis var. sinensis HOM05D005902 ORTHO05D007182 2.7e-58 229.2 149 74.5
Pp3c3_23430 Physcomitrium patens HOM05D005902 ORTHO05D007182 2.5e-56 222.6 184 54.9
Pp3c10_12120 Physcomitrium patens HOM05D005902 ORTHO05D007182 3.4e-53 212.2 184 53.3
SMO367G0342 Selaginella moellendorffii HOM05D005902 ORTHO05D007182 3.4e-53 212.2 192 53.1
CBR_g54208 Chara braunii HOM05D005902 ORTHO05D007182 1.3e-52 210.3 186 57.0
Mapoly0001s0397 Marchantia polymorpha HOM05D005902 ORTHO05D007182 1.2e-50 203.8 187 52.9
HPP92_002287 Vanilla planifolia HOM05D005902 ORTHO05D007182 3.5e-50 202.2 153 66.0
CBR_g54207 Chara braunii HOM05D005902 ORTHO05D007182 1.1e-48 197.2 182 54.9
CSS0023311 Camellia sinensis var. sinensis HOM05D005902 ORTHO05D007182 9.9e-45 184.1 184 54.3
Os03g0237500 Oryza sativa ssp. japonica HOM05D005902 ORTHO05D007182 1.4e-38 163.7 189 48.7
Zm00001eb010060 Zea mays HOM05D005902 ORTHO05D007182 5.3e-38 161.8 188 46.8
BcaC03g14730 Brassica carinata HOM05D005902 ORTHO05D007182 2.1e-34 149.8 92 77.2
MD03G1052600 Malus domestica HOM05D005902 ORTHO05D007182 1.9e-32 143.3 91 73.6
MCO11G231 Micromonas commoda HOM05D005902 ORTHO05D007182 3.0e-25 119.4 185 36.2
MD01G1041600 Malus domestica HOM05D005902 ORTHO05D007182 8.7e-25 117.9 79 69.6
Cre16.g691215 Chlamydomonas reinhardtii HOM05D005902 ORTHO05D007182 8.2e-23 111.3 186 33.9
MD16G1261800 Malus domestica HOM05D005902 ORTHO05D007182 1.3e-20 104.0 50 90.0
PRCOL_00005463 Prasinoderma coloniale HOM05D005902 ORTHO05D007182 2.5e-11 73.2 157 32.5
CSS0027287 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 8.8e-09 64.7 31 87.1
BolC2t08309H Brassica oleracea HOM05D005902 ORTHO05D007182 1.7e-07 60.5 28 92.9


User provided reference genes

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