Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 1.5e-52 209.1 100 100.0
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 1.0e-40 169.9 100 79.0
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.9e-39 165.6 102 79.4
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 3.5e-33 144.8 98 69.4
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 9.0e-29 130.2 98 66.3
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 2.9e-27 125.2 94 61.7
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 8.4e-27 123.6 94 60.6
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 8.4e-27 123.6 75 73.3
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 1.1e-26 123.2 87 64.4
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 1.9e-26 122.5 93 60.2
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 1.9e-26 122.5 84 66.7
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 1.9e-26 122.5 76 72.4
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 2.4e-26 122.1 71 74.6
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 2.4e-26 122.1 71 74.6
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 2.4e-26 122.1 89 64.0
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 3.2e-26 121.7 85 67.1
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 3.2e-26 121.7 103 62.1
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 5.4e-26 120.9 90 62.2
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 5.4e-26 120.9 78 69.2
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 5.4e-26 120.9 89 62.9
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 5.4e-26 120.9 69 73.9
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 9.3e-26 120.2 96 62.5
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 9.3e-26 120.2 71 73.2
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 1.2e-25 119.8 111 52.3
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 1.2e-25 119.8 88 63.6
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 1.6e-25 119.4 95 60.0
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 2.1e-25 119.0 104 56.7
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 2.7e-25 118.6 88 61.4
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 2.7e-25 118.6 95 60.0
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 2.7e-25 118.6 95 60.0
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 6.0e-25 117.5 73 68.5
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 1.3e-24 116.3 71 67.6
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.3e-24 116.3 95 57.9
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 1.7e-24 115.9 79 65.8
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 2.3e-24 115.5 95 60.0
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 3.0e-24 115.2 86 64.0
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 3.0e-24 115.2 76 64.5
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 3.0e-24 115.2 76 64.5
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 3.0e-24 115.2 76 64.5
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 3.9e-24 114.8 89 57.3
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 3.9e-24 114.8 78 65.4
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 3.9e-24 114.8 73 68.5
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 3.9e-24 114.8 94 57.4
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 5.1e-24 114.4 68 79.4
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 6.6e-24 114.0 73 65.8
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 6.6e-24 114.0 81 60.5
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 1.1e-23 113.2 89 58.4
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 1.1e-23 113.2 90 57.8
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 1.9e-23 112.5 73 64.4
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 2.5e-23 112.1 79 63.3
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 2.5e-23 112.1 79 63.3
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 3.3e-23 111.7 74 64.9
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 4.3e-23 111.3 94 55.3
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 5.6e-23 110.9 78 62.8
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 7.3e-23 110.5 67 79.1
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 9.6e-23 110.2 118 50.0
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 9.6e-23 110.2 75 64.0
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 1.3e-22 109.8 73 65.8
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 1.6e-22 109.4 82 62.2
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 2.1e-22 109.0 63 71.4
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 2.1e-22 109.0 61 73.8
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 2.8e-22 108.6 77 59.7
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 3.6e-22 108.2 91 53.8
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 3.6e-22 108.2 91 53.8
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 3.6e-22 108.2 89 60.7
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 6.2e-22 107.5 91 53.8
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 8.1e-22 107.1 91 53.8
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 8.1e-22 107.1 91 53.8
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 8.1e-22 107.1 91 53.8
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 1.1e-21 106.7 82 62.2
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 1.4e-21 106.3 91 53.8
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 1.8e-21 105.9 81 56.8
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 2.4e-21 105.5 82 61.0
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 6.9e-21 104.0 76 57.9
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 2.0e-20 102.4 81 58.0
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 3.4e-20 101.7 86 55.8
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 3.4e-20 101.7 82 58.5
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 3.4e-20 101.7 74 55.4
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 4.5e-20 101.3 81 55.6
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 4.5e-20 101.3 84 54.8
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 5.8e-20 100.9 81 56.8
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 5.8e-20 100.9 81 56.8
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 5.8e-20 100.9 70 62.9
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 9.9e-20 100.1 81 54.3
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 9.9e-20 100.1 58 72.4
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 1.3e-19 99.8 69 66.7
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 1.3e-19 99.8 69 62.3
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 2.2e-19 99.0 65 69.2
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 3.8e-19 98.2 59 72.9
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 3.8e-19 98.2 59 72.9
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 3.8e-19 98.2 62 69.4
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 4.9e-19 97.8 81 53.1
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 4.9e-19 97.8 105 48.6
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 3.2e-18 95.1 121 43.0
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 2.1e-17 92.4 78 57.7
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 1.8e-16 89.4 59 61.0
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 1.8e-16 89.4 79 53.2
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 6.7e-16 87.4 60 61.7
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 1.5e-15 86.3 58 63.8
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 4.3e-15 84.7 88 48.9
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 5.6e-15 84.3 83 53.0
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 5.6e-15 84.3 83 53.0
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 1.8e-13 79.3 62 58.1
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 2.4e-13 79.0 47 68.1
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 4.0e-13 78.2 67 58.2
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 1.3e-08 63.2 62 41.9
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 1.1e-07 60.1 39 66.7
Peaxi162Scf00070g00023 Petunia axillaris HOM05D007141 ORTHO05D008975 7.4e-07 57.4 40 60.0
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 9.6e-07 57.0 42 50.0


User provided reference genes

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