Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03806 Beta vulgaris HOM05D004577 ORTHO05D005062 1.8e-74 282.7 166 100.0
EL10Ac7g17857 Beta vulgaris HOM05D004577 ORTHO05D005062 2.9e-40 169.1 175 69.7
Sc22g0002120 Simmondsia chinensis HOM05D004577 ORTHO05D005062 9.0e-26 120.9 170 57.6
Cfa021890 Carpinus fangiana HOM05D004577 ORTHO05D005062 8.4e-24 114.4 113 70.8
QL08p002692 Quercus lobata HOM05D004577 ORTHO05D005062 1.1e-23 114.0 136 62.5
MD03G1035300 Malus domestica HOM05D004577 ORTHO05D005062 7.1e-23 111.3 174 47.7
Glyma.18G074400 Glycine max HOM05D004577 ORTHO05D005062 2.1e-22 109.8 100 78.0
TAR627G0729 Trochodendron aralioides HOM05D004577 ORTHO05D005062 2.7e-22 109.4 134 61.2
Haze_09864 Corylus avellana HOM05D004577 ORTHO05D005062 4.6e-22 108.6 165 54.5
Glyma.08G332600 Glycine max HOM05D004577 ORTHO05D005062 1.0e-21 107.5 96 79.2
CiPaw.11G206900 Carya illinoinensis HOM05D004577 ORTHO05D005062 1.3e-21 107.1 94 78.7
Phvul.006G059254 Phaseolus vulgaris HOM05D004577 ORTHO05D005062 1.3e-21 107.1 96 80.2
VMungo0540G1151 Vigna mungo HOM05D004577 ORTHO05D005062 1.3e-21 107.1 96 80.2
Cc10_g02580 Coffea canephora HOM05D004577 ORTHO05D005062 1.8e-21 106.7 161 56.5
RcHm_v2.0_Chr5g0075591 Rosa chinensis HOM05D004577 ORTHO05D005062 3.0e-21 105.9 126 59.5
CiPaw.12G140600 Carya illinoinensis HOM05D004577 ORTHO05D005062 3.9e-21 105.5 102 76.5
MD11G1037000 Malus domestica HOM05D004577 ORTHO05D005062 3.9e-21 105.5 139 52.5
Sed0027009 Sechium edule HOM05D004577 ORTHO05D005062 6.7e-21 104.8 98 76.5
TAR629G1725 Trochodendron aralioides HOM05D004577 ORTHO05D005062 6.7e-21 104.8 116 67.2
MELO3C014068.2 Cucumis melo HOM05D004577 ORTHO05D005062 8.7e-21 104.4 96 76.0
Dinv40884 Davidia involucrata HOM05D002691 ORTHO05D003304 8.7e-21 104.4 171 55.6
Peaxi162Scf00359g00123 Petunia axillaris HOM05D004577 ORTHO05D005062 8.7e-21 104.4 98 79.6
FvH4_3g42270 Fragaria vesca HOM05D004577 ORTHO05D005062 1.9e-20 103.2 169 47.9
PGSC0003DMG400014846 Solanum tuberosum HOM05D004577 ORTHO05D005062 1.9e-20 103.2 120 69.2
ClCG10G003880 Citrullus lanatus HOM05D004577 ORTHO05D005062 3.3e-20 102.4 98 74.5
ClCG10G004020 Citrullus lanatus HOM05D004577 ORTHO05D005062 3.3e-20 102.4 98 74.5
ClCG10G004040 Citrullus lanatus HOM05D004577 ORTHO05D005062 3.3e-20 102.4 98 74.5
Lalb_Chr16g0391221 Lupinus albus HOM05D004577 ORTHO05D005062 4.3e-20 102.1 96 74.0
Nn1g08321 Nelumbo nucifera HOM05D004577 ORTHO05D005062 4.3e-20 102.1 185 46.5
MBI15_g38535_MAGBIO Magnolia biondii HOM05D004577 ORTHO05D005062 5.7e-20 101.7 98 75.5
Solyc08g006050.2 Solanum lycopersicum HOM05D004577 ORTHO05D005062 5.7e-20 101.7 120 65.8
MSTRG.13031 Avicennia marina HOM05D004577 ORTHO05D005062 7.4e-20 101.3 120 64.2
CSS0013049 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 7.4e-20 101.3 129 61.2
Solyc04g051850.3 Solanum lycopersicum HOM05D004577 ORTHO05D005062 7.4e-20 101.3 98 77.6
Sopen04g023180 Solanum pennellii HOM05D004577 ORTHO05D005062 7.4e-20 101.3 98 77.6
Sopen08g002020 Solanum pennellii HOM05D004577 ORTHO05D005062 7.4e-20 101.3 120 63.3
PGSC0003DMG400016552 Solanum tuberosum HOM05D004577 ORTHO05D005062 7.4e-20 101.3 98 77.6
CSS0030856 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 9.7e-20 100.9 97 75.3
CSS0048553 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 9.7e-20 100.9 97 75.3
PGR004G1013 Punica granatum HOM05D004577 ORTHO05D005062 1.3e-19 100.5 148 58.1
Migut.M01633 Erythranthe guttata HOM05D004577 ORTHO05D005062 2.8e-19 99.4 129 62.0
FAN25G2651 Fragaria x ananassa HOM05D004577 ORTHO05D005062 2.8e-19 99.4 169 47.3
unitig_8.g4693 Utricularia gibba HOM05D002703 ORTHO05D002921 2.8e-19 99.4 149 57.0
Eucgr.K00372 Eucalyptus grandis HOM05D004577 ORTHO05D005062 3.7e-19 99.0 100 73.0
Nitab4.5_0000904g0010 Nicotiana tabacum HOM05D004577 ORTHO05D005062 3.7e-19 99.0 132 62.9
MSTRG.14503 Avicennia marina HOM05D004577 ORTHO05D005062 6.3e-19 98.2 97 74.2
CSS0050514 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 6.3e-19 98.2 119 65.5
CANSAT11G1943 Cannabis sativa HOM05D004577 ORTHO05D005062 6.3e-19 98.2 127 58.3
Lj6g0018119 Lotus japonicus HOM05D004577 ORTHO05D005062 8.2e-19 97.8 169 53.8
arahy.Tifrunner.gnm1.ann1.DGYJ7N Arachis hypogaea HOM05D004577 ORTHO05D005062 1.1e-18 97.4 97 76.3
arahy.Tifrunner.gnm1.ann1.JWFX0I Arachis hypogaea HOM05D004577 ORTHO05D005062 1.1e-18 97.4 97 76.3
Potri.011G163900 Populus trichocarpa HOM05D004577 ORTHO05D005062 1.1e-18 97.4 98 72.4
FAN16G3679 Fragaria x ananassa HOM05D004577 ORTHO05D005062 1.8e-18 96.7 169 45.6
FAN21G3744 Fragaria x ananassa HOM05D004577 ORTHO05D005062 2.4e-18 96.3 169 45.6
PSO675G7851 Papaver somniferum HOM05D004577 ORTHO05D005062 3.1e-18 95.9 122 63.9
Nitab4.5_0005865g0040 Nicotiana tabacum HOM05D004577 ORTHO05D005062 4.1e-18 95.5 132 61.4
Prupe.6G028300 Prunus persica HOM05D004577 ORTHO05D005062 4.1e-18 95.5 176 46.6
Thecc.07G153300 Theobroma cacao HOM05D004577 ORTHO05D005062 4.1e-18 95.5 124 56.5
unitig_578.g16418 Utricularia gibba HOM05D004577 ORTHO05D005062 5.3e-18 95.1 108 67.6
Ca_12454_v3 Cicer arietinum L. HOM05D004577 ORTHO05D005062 6.9e-18 94.7 98 72.4
CsaV3_3G003860 Cucumis sativus L. HOM05D004577 ORTHO05D005062 9.0e-18 94.4 98 70.4
Oeu021394.1 Olea europaea HOM05D004577 ORTHO05D005062 9.0e-18 94.4 126 59.5
Ciclev10009709m.g Citrus clementina HOM05D004577 ORTHO05D005062 1.2e-17 94.0 175 49.1
PSO541G2111 Papaver somniferum HOM05D004577 ORTHO05D005062 1.5e-17 93.6 94 77.7
ECA240G1529 Erigeron canadensis HOM05D000491 ORTHO05D000359 2.6e-17 92.8 164 51.8
CDE02G2114 Ceratophyllum demersum HOM05D000091 ORTHO05D002116 3.4e-17 92.4 98 71.4
Gohir.D09G118900 Gossypium hirsutum HOM05D004577 ORTHO05D005062 3.4e-17 92.4 123 56.9
HPP92_020499 Vanilla planifolia HOM05D004577 ORTHO05D005062 3.4e-17 92.4 100 72.0
CDE01G0461 Ceratophyllum demersum HOM05D004577 ORTHO05D005062 4.5e-17 92.0 123 64.2
Lsat_1_v5_gn_9_89100 Lactuca sativa HOM05D004577 ORTHO05D005062 4.5e-17 92.0 102 72.5
MBI07_g28243_MAGBIO Magnolia biondii HOM05D004577 ORTHO05D005062 4.5e-17 92.0 141 48.9
FAN11G1489 Fragaria x ananassa HOM05D004577 ORTHO05D005062 7.7e-17 91.3 169 45.6
THA.LOC104826365 Tarenaya hassleriana HOM05D004577 ORTHO05D005062 1.0e-16 90.9 148 53.4
SalBow1G5164 Salvia bowleyana HOM05D004577 ORTHO05D005062 2.2e-16 89.7 161 49.7
Duzib213G0774 Durio zibethinus HOM05D004577 ORTHO05D005062 5.0e-16 88.6 95 63.2
HanXRQChr03g0080381 Helianthus annuus HOM05D004577 ORTHO05D005062 5.0e-16 88.6 97 73.2
Hma1.2p1_0193F.1_g083910 Hydrangea macrophylla HOM05D004577 ORTHO05D005062 5.0e-16 88.6 87 74.7
Gohir.A01G038700 Gossypium hirsutum HOM05D004577 ORTHO05D005062 6.5e-16 88.2 123 53.7
Medtr3g461020 Medicago truncatula HOM05D004577 ORTHO05D005062 8.5e-16 87.8 98 72.4
Migut.H01738 Erythranthe guttata HOM05D004577 ORTHO05D005062 1.1e-15 87.4 165 50.3
HanXRQChr13g0408461 Helianthus annuus HOM05D004577 ORTHO05D005062 2.5e-15 86.3 160 55.6
ATR0681G062 Amborella trichopoda HOM05D004577 ORTHO05D005062 3.2e-15 85.9 100 65.0
Manes.01G021500 Manihot esculenta HOM05D004577 ORTHO05D005062 3.2e-15 85.9 162 45.7
Psat5g166440 Pisum sativum HOM05D004577 ORTHO05D005062 5.5e-15 85.1 95 71.6
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 7.2e-15 84.7 103 52.4
Nitab4.5_0000329g0070 Nicotiana tabacum HOM05D004577 ORTHO05D005062 7.2e-15 84.7 112 57.1
Aqoxy5G01161 Aquilegia oxysepala HOM05D004577 ORTHO05D005062 9.4e-15 84.3 95 70.5
Thhalv10011850m.g Eutrema salsugineum HOM05D004577 ORTHO05D005062 9.4e-15 84.3 98 71.4
Hma1.2p1_3473F.1_g336250 Hydrangea macrophylla HOM05D004577 ORTHO05D005062 9.4e-15 84.3 87 66.7
AL1G64510 Arabidopsis lyrata HOM05D004577 ORTHO05D005062 1.6e-14 83.6 98 68.4
AT1G56200 Arabidopsis thaliana HOM05D004577 ORTHO05D005062 1.6e-14 83.6 98 68.4
Carub.0001s4488 Capsella rubella HOM05D004577 ORTHO05D005062 1.6e-14 83.6 98 68.4
DCAR_015198 Daucus carota HOM05D004577 ORTHO05D005062 1.6e-14 83.6 106 63.2
Manes.05G118000 Manihot esculenta HOM05D004577 ORTHO05D005062 2.7e-14 82.8 99 66.7
TPR.G17935 Trifolium pratense HOM05D004577 ORTHO05D005062 2.7e-14 82.8 98 61.2
CARHR045970 Cardamine hirsuta HOM05D004577 ORTHO05D005062 4.6e-14 82.0 99 66.7
C04p16620 Brassica napus HOM05D004577 ORTHO05D005062 7.9e-14 81.3 99 66.7
BolC4t23212H Brassica oleracea HOM05D004577 ORTHO05D005062 7.9e-14 81.3 99 66.7
TWI38G1007 Tripterygium wilfordii HOM05D004577 ORTHO05D005062 1.0e-13 80.9 96 62.5
BcaB02g10507 Brassica carinata HOM05D004577 ORTHO05D005062 1.4e-13 80.5 99 66.7
Sp1g41840 Schrenkiella parvula HOM05D004577 ORTHO05D005062 1.4e-13 80.5 102 67.6
DCAR_019165 Daucus carota HOM05D004577 ORTHO05D005062 1.8e-13 80.1 166 48.8
A05p12690 Brassica napus HOM05D004577 ORTHO05D005062 2.3e-13 79.7 99 65.7
BraA05t20207Z Brassica rapa HOM05D004577 ORTHO05D005062 2.3e-13 79.7 99 65.7
Eucgr.E00269 Eucalyptus grandis HOM05D004577 ORTHO05D005062 3.9e-13 79.0 100 56.0
Nitab4.5_0006854g0030 Nicotiana tabacum HOM05D004577 ORTHO05D005062 3.9e-13 79.0 114 58.8
Duzib187G1448 Durio zibethinus HOM05D004577 ORTHO05D005062 6.7e-13 78.2 122 48.4
Atru.chr1.1924 Acer truncatum HOM05D004577 ORTHO05D005062 1.1e-12 77.4 118 52.5
TWI39G1131 Tripterygium wilfordii HOM05D004577 ORTHO05D005062 1.1e-12 77.4 96 58.3
Gorai.N025400 Gossypium raimondii HOM05D004577 ORTHO05D005062 2.2e-11 73.2 65 78.5
Gorai.008G093100 Gossypium raimondii HOM05D004577 ORTHO05D005062 4.8e-11 72.0 65 76.9
Carub.0001s2869 Capsella rubella HOM05D004577 ORTHO05D005062 6.3e-11 71.6 85 65.9
SGA_v2.0_scaffold8G04425 Striga asiatica HOM05D004577 ORTHO05D005062 8.2e-11 71.2 98 66.3
Dinv26646 Davidia involucrata HOM05D004577 ORTHO05D005062 1.1e-10 70.9 98 57.1
Gorai.008G148200 Gossypium raimondii HOM05D004577 ORTHO05D005062 1.1e-10 70.9 65 76.9
Sp1g26310 Schrenkiella parvula HOM05D004577 ORTHO05D005062 1.4e-10 70.5 91 58.2
QL08p055193 Quercus lobata HOM05D004577 ORTHO05D005062 1.8e-10 70.1 95 56.8
C07p15110 Brassica napus HOM05D004577 ORTHO05D005062 3.1e-10 69.3 87 59.8
BolC7t42015H Brassica oleracea HOM05D004577 ORTHO05D005062 3.1e-10 69.3 87 59.8
BcaB03g13825 Brassica carinata HOM05D004577 ORTHO05D005062 4.1e-10 68.9 87 59.8
A07p09910 Brassica napus HOM05D004577 ORTHO05D005062 4.1e-10 68.9 87 59.8
Thhalv10008915m.g Eutrema salsugineum HOM05D004577 ORTHO05D005062 5.3e-10 68.6 87 65.5
GSVIVG01014742001 Vitis vinifera HOM05D004577 ORTHO05D005062 2.0e-09 66.6 51 66.7
AL1G44500 Arabidopsis lyrata HOM05D004577 ORTHO05D005062 2.6e-09 66.2 87 64.4
CARHR029880 Cardamine hirsuta HOM05D004577 ORTHO05D005062 2.6e-09 66.2 85 60.0
AT1G30475 Arabidopsis thaliana HOM05D004577 ORTHO05D005062 5.9e-09 65.1 87 64.4
A08p24420 Brassica napus HOM05D004577 ORTHO05D005062 5.9e-09 65.1 88 54.5
C03p76790 Brassica napus HOM05D004577 ORTHO05D005062 5.9e-09 65.1 88 54.5
BraA08t34397Z Brassica rapa HOM05D004577 ORTHO05D005062 5.9e-09 65.1 88 54.5
THA.LOC104798603 Tarenaya hassleriana HOM05D004577 ORTHO05D005062 5.9e-09 65.1 87 64.4
Aa31LG10G50 Aethionema arabicum HOM05D004577 ORTHO05D005062 1.0e-08 64.3 65 72.3
BcaC01g00196 Brassica carinata HOM05D004577 ORTHO05D005062 1.7e-08 63.5 85 57.6
Gorai.002G035900 Gossypium raimondii HOM05D004577 ORTHO05D005062 1.7e-08 63.5 121 46.3
BcaNung05263 Brassica carinata HOM05D004577 ORTHO05D005062 2.2e-08 63.2 85 55.3
BraA07t28780Z Brassica rapa HOM05D004577 ORTHO05D005062 2.2e-08 63.2 106 50.0
Gorai.009G401800 Gossypium raimondii HOM05D004577 ORTHO05D005062 2.2e-08 63.2 65 63.1
unitig_0.g986 Utricularia gibba HOM05D004577 ORTHO05D005062 2.2e-08 63.2 110 56.4
Gohir.D08G183166 Gossypium hirsutum HOM05D004577 ORTHO05D005062 5.0e-08 62.0 64 68.8
Lalb_Chr03g0040851 Lupinus albus HOM05D011393 ORTHO05D013493 6.5e-08 61.6 116 43.1
Potri.001G371500 Populus trichocarpa HOM05D004577 ORTHO05D005062 8.5e-08 61.2 107 46.7
BolC3t19933H Brassica oleracea HOM05D004577 ORTHO05D005062 1.1e-07 60.8 85 54.1
Cfa001670 Carpinus fangiana HOM05D004577 ORTHO05D005062 2.5e-07 59.7 95 56.8
CiPaw.01G270900 Carya illinoinensis HOM05D004577 ORTHO05D005062 5.5e-07 58.5 100 52.0
HPP92_011618 Vanilla planifolia HOM05D004577 ORTHO05D005062 5.5e-07 58.5 103 49.5
Haze_16864 Corylus avellana HOM05D004577 ORTHO05D005062 9.4e-07 57.8 95 54.7
Atru.chr2.3835 Acer truncatum HOM05D004577 ORTHO05D005062 1.2e-06 57.4 158 41.8
Mapoly0031s0147 Marchantia polymorpha HOM05D034204 ORTHO05D005062 2.1e-06 56.6 84 58.3
TPR.G2686 Trifolium pratense HOM05D011393 ORTHO05D013493 2.7e-06 56.2 111 40.5
AagrBONN_evm.TU.Sc2ySwM_228.3972 Anthoceros agrestis HOM05D004577 ORTHO05D005062 3.6e-06 55.8 97 56.7
Mapoly0050s0087 Marchantia polymorpha HOM05D034204 ORTHO05D005062 3.6e-06 55.8 85 55.3


User provided reference genes

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