Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 9.0e-99 363.6 186 100.0
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 2.5e-61 239.2 243 58.4
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 2.2e-60 236.1 241 57.7
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 2.2e-49 199.5 128 75.8
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 4.2e-48 195.3 170 62.4
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 5.5e-48 194.9 126 75.4
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 1.6e-47 193.4 128 73.4
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 1.6e-47 193.4 157 65.6
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 2.7e-47 192.6 127 74.0
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 2.7e-47 192.6 157 65.0
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 4.7e-47 191.8 149 65.1
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 4.7e-47 191.8 126 74.6
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 8.0e-47 191.0 157 64.3
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 6.7e-46 188.0 129 71.3
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 1.1e-45 187.2 128 71.1
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 3.3e-45 185.7 157 63.1
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 4.4e-45 185.3 127 69.3
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 4.4e-45 185.3 149 65.1
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 5.7e-45 184.9 146 65.1
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 1.4e-43 180.3 128 69.5
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 1.4e-43 180.3 126 70.6
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 1.4e-43 180.3 145 63.4
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 9.1e-43 177.6 128 67.2
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.2e-42 177.2 128 67.2
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 1.2e-42 177.2 128 69.5
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 1.6e-42 176.8 130 66.2
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 1.6e-42 176.8 130 68.5
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 2.0e-42 176.4 153 60.1
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 3.5e-42 175.6 149 63.1
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 4.5e-42 175.3 129 67.4
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 5.9e-42 174.9 128 66.4
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 1.0e-41 174.1 130 66.2
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 1.3e-41 173.7 128 64.8
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 1.3e-41 173.7 130 66.9
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 1.3e-41 173.7 216 48.1
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 2.9e-41 172.6 127 66.9
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 1.1e-40 170.6 128 68.0
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 1.5e-40 170.2 151 60.3
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 1.5e-40 170.2 128 66.4
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 2.1e-39 166.4 159 56.6
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 3.6e-39 165.6 130 62.3
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 4.7e-39 165.2 129 64.3
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 6.1e-39 164.9 127 63.8
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 6.1e-39 164.9 181 50.3
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 1.0e-38 164.1 223 48.0
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 1.4e-38 163.7 130 63.8
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 2.3e-38 162.9 127 63.8
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 3.0e-38 162.5 156 53.2
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 4.0e-38 162.2 127 62.2
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 4.0e-38 162.2 128 63.3
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 5.2e-38 161.8 127 61.4
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 6.7e-38 161.4 127 62.2
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 6.7e-38 161.4 127 62.2
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 6.7e-38 161.4 127 62.2
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 6.7e-38 161.4 127 62.2
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 6.7e-38 161.4 127 62.2
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 8.8e-38 161.0 127 59.1
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 8.8e-38 161.0 128 62.5
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 8.8e-38 161.0 157 54.1
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 1.2e-37 160.6 127 60.6
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 1.2e-37 160.6 127 61.4
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 2.6e-37 159.5 130 63.1
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 3.3e-37 159.1 132 59.1
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 4.4e-37 158.7 127 59.8
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 5.7e-37 158.3 127 59.8
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 5.7e-37 158.3 128 61.7
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 7.5e-37 157.9 128 61.7
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 9.7e-37 157.5 149 58.4
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 9.7e-37 157.5 214 43.9
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 1.3e-36 157.1 129 61.2
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 6.3e-36 154.8 127 59.1
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 1.1e-35 154.1 154 53.2
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 3.1e-35 152.5 137 59.1
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 4.1e-35 152.1 127 62.2
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 5.3e-35 151.8 98 76.5
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 9.1e-35 151.0 147 53.1
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 1.6e-34 150.2 151 53.0
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 2.7e-34 149.4 100 73.0
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 7.7e-34 147.9 134 58.2
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 1.3e-33 147.1 205 43.9
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 1.7e-33 146.7 151 53.6
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 2.7e-31 139.4 137 53.3
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 3.0e-30 136.0 124 58.1
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.2e-29 134.0 132 53.8
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 3.4e-29 132.5 129 54.3
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 7.5e-29 131.3 101 63.4
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 9.8e-29 131.0 96 67.7
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 3.7e-28 129.0 125 54.4
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 6.3e-28 128.3 106 59.4
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.6e-26 123.6 164 47.6
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 4.5e-26 122.1 132 50.8
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 7.7e-26 121.3 139 47.5
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 7.0e-19 98.2 123 44.7
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 7.0e-19 98.2 104 51.0
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 3.9e-17 92.4 126 43.7
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 8.0e-15 84.7 184 36.4
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 7.0e-11 71.6 136 32.4
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 1.5e-08 63.9 66 50.0
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 1.6e-07 60.5 55 54.5
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 5.2e-06 55.5 97 35.1


User provided reference genes

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