Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 1.3e-168 596.3 299 100.0
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 1.2e-140 503.4 325 81.5
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 9.2e-138 493.8 314 81.5
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 4.4e-124 448.4 298 79.5
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 7.6e-124 447.6 327 71.3
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 3.8e-123 445.3 326 70.6
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 7.1e-122 441.0 320 70.0
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 1.0e-120 437.2 307 75.2
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 1.4e-117 426.8 316 69.0
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 1.8e-117 426.4 319 69.6
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 3.1e-117 425.6 315 68.9
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 1.7e-115 419.9 316 69.3
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 1.7e-115 419.9 320 68.1
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 1.7e-115 419.9 316 68.7
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 2.9e-115 419.1 317 68.1
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 1.1e-114 417.2 316 68.0
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 2.7e-113 412.5 319 66.5
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 2.7e-113 412.5 318 67.9
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 4.6e-113 411.8 317 67.5
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 2.3e-112 409.5 315 68.3
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 3.0e-112 409.1 315 66.0
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 1.9e-111 406.4 317 66.2
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 4.3e-111 405.2 323 65.9
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 8.1e-110 401.0 323 64.7
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 1.1e-109 400.6 319 63.9
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 2.4e-109 399.4 320 64.4
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 6.9e-109 397.9 316 65.2
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 1.5e-108 396.7 316 64.9
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 4.5e-108 395.2 316 64.9
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 5.8e-108 394.8 316 63.9
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 2.9e-107 392.5 319 63.3
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 4.9e-107 391.7 316 64.6
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 6.4e-107 391.3 312 64.1
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 1.9e-106 389.8 332 64.2
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 2.4e-106 389.4 319 62.1
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 3.2e-106 389.0 316 63.3
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 4.2e-106 388.7 318 62.3
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 4.2e-106 388.7 315 63.8
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 5.5e-106 388.3 321 63.2
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 9.3e-106 387.5 319 61.8
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 1.2e-105 387.1 316 63.3
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 2.1e-105 386.3 317 62.5
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 3.5e-105 385.6 323 62.8
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 6.0e-105 384.8 319 63.9
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 6.0e-105 384.8 316 63.3
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 2.3e-104 382.9 294 66.3
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 3.9e-104 382.1 317 63.4
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 6.7e-104 381.3 311 63.0
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 8.7e-104 380.9 319 62.7
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 8.7e-104 380.9 319 62.7
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.9e-103 379.8 315 62.5
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 1.9e-103 379.8 320 61.6
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 2.5e-103 379.4 316 64.9
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 4.3e-103 378.6 320 61.2
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 8.2e-102 374.4 317 62.8
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 1.4e-101 373.6 319 62.1
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 1.8e-101 373.2 320 61.6
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 5.3e-101 371.7 315 64.1
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 1.2e-100 370.5 308 62.7
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 1.2e-100 370.5 308 62.7
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 7.1e-98 361.3 323 60.7
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 7.9e-97 357.8 309 60.2
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 1.0e-96 357.5 322 58.4
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 1.0e-96 357.5 316 59.8
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 1.8e-96 356.7 313 61.3
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 1.8e-96 356.7 304 63.5
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 2.3e-96 356.3 318 60.1
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 3.0e-96 355.9 268 67.5
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 1.5e-95 353.6 278 65.5
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 1.3e-94 350.5 321 59.2
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 3.7e-94 349.0 315 58.1
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 6.3e-94 348.2 307 58.3
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 8.2e-94 347.8 311 59.8
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 1.1e-93 347.4 319 58.3
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 1.4e-93 347.1 315 58.7
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 2.4e-93 346.3 315 57.8
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 3.1e-93 345.9 315 57.5
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 6.9e-93 344.7 315 57.5
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 1.2e-92 344.0 316 57.9
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 1.2e-92 344.0 317 56.5
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 1.0e-91 340.9 294 56.5
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 1.4e-90 337.0 308 57.5
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 1.9e-90 336.7 311 56.6
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 1.9e-90 336.7 320 57.8
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 5.5e-90 335.1 278 62.9
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 2.1e-89 333.2 230 73.0
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 3.6e-89 332.4 299 57.9
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 4.6e-89 332.0 302 57.0
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 4.6e-89 332.0 222 73.9
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 4.6e-89 332.0 313 56.9
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 7.9e-89 331.3 316 54.7
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.0e-88 330.9 317 58.4
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 5.1e-88 328.6 317 57.7
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 1.5e-87 327.0 309 58.6
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 4.8e-86 322.0 265 62.6
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 1.8e-85 320.1 343 52.2
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 4.5e-84 315.5 310 54.5
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 3.2e-82 309.3 322 53.7
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.4e-77 293.9 308 54.5
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 3.1e-69 266.2 310 51.9
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 1.4e-64 250.8 193 66.8
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 1.9e-50 203.8 237 51.9
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 4.3e-42 176.0 189 52.9
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 4.6e-36 156.0 299 34.4
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.3e-35 154.5 130 61.5
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 1.7e-35 154.1 193 46.1
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 2.3e-35 153.7 197 41.1
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 8.6e-35 151.8 294 34.7
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 1.5e-34 151.0 136 53.7
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.1e-32 144.8 238 41.6
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 8.3e-30 135.2 236 33.9
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 1.1e-29 134.8 196 37.2
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 4.3e-18 96.3 135 43.7
MBI16_g27300_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 4.4e-15 86.3 59 71.2
Os04g0284100 Oryza sativa ssp. japonica HOM05D006939 ORTHO05D008616 1.9e-13 80.9 56 66.1
CDE05G2180 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 7.6e-07 58.9 113 34.5


User provided reference genes

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