Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03745 Beta vulgaris HOM05D008388 ORTHO05D000309 1.6e-76 289.3 142 100.0
EL10Ac2g03965 Beta vulgaris HOM05D008388 ORTHO05D000309 1.3e-65 253.1 142 88.7
EL10Ac7g16399 Beta vulgaris HOM05D008388 ORTHO05D000309 2.7e-63 245.4 142 88.7
EL10Ac2g03864 Beta vulgaris HOM05D000060 ORTHO05D000309 5.1e-54 214.5 122 88.5
EL10As8g23853 Beta vulgaris HOM05D008388 ORTHO05D000309 2.5e-53 212.2 122 86.9
Ah.13g069370 Amaranthus hybridus HOM05D008388 ORTHO05D000309 1.1e-16 90.5 105 41.0
Ah.02g111520 Amaranthus hybridus HOM05D008388 ORTHO05D000309 2.8e-15 85.9 90 44.4
EL10Ac9g22677 Beta vulgaris HOM05D008388 ORTHO05D000309 3.6e-15 85.5 134 38.8
EL10Ac5g11999 Beta vulgaris HOM05D008388 ORTHO05D000309 4.7e-15 85.1 134 38.8
EL10Ac3g07074 Beta vulgaris HOM05D008388 ORTHO05D000309 6.1e-15 84.7 78 46.2
AUR62041031 Chenopodium quinoa HOM05D008388 ORTHO05D000309 8.0e-15 84.3 119 37.8
Ah.03g139560 Amaranthus hybridus HOM05D008388 ORTHO05D000309 1.0e-14 84.0 107 40.2
Ah.11g043710 Amaranthus hybridus HOM05D008388 ORTHO05D000309 1.4e-14 83.6 99 40.4
Ah.01g011000 Amaranthus hybridus HOM05D008388 ORTHO05D000309 3.0e-14 82.4 118 37.3
EL10Ac5g12256 Beta vulgaris HOM05D008388 ORTHO05D000309 5.2e-14 81.6 106 34.9
EL10Ac8g18852 Beta vulgaris HOM05D008388 ORTHO05D000309 6.8e-14 81.3 104 38.5
EL10Ac9g22366 Beta vulgaris HOM05D008388 ORTHO05D000309 6.8e-14 81.3 110 35.5
AUR62030200 Chenopodium quinoa HOM05D008388 ORTHO05D000309 6.8e-14 81.3 85 42.4
AUR62006272 Chenopodium quinoa HOM05D008388 ORTHO05D000309 2.0e-13 79.7 82 45.1
EL10Ac2g02861 Beta vulgaris HOM05D008388 ORTHO05D000309 3.4e-13 79.0 136 33.8
Ah.04g159280 Amaranthus hybridus HOM05D008388 ORTHO05D000309 7.5e-13 77.8 67 49.3
AUR62014271 Chenopodium quinoa HOM05D008388 ORTHO05D000309 9.8e-13 77.4 69 52.2
BcaB02g11020 Brassica carinata HOM05D007774 ORTHO05D000309 3.1e-11 72.4 83 41.0
EL10Ac1g02302 Beta vulgaris HOM05D008388 ORTHO05D000309 9.2e-11 70.9 90 34.4
EL10Ac5g10607 Beta vulgaris HOM05D008388 ORTHO05D000309 9.2e-11 70.9 103 35.0
EL10Ac6g14557 Beta vulgaris HOM05D007123 ORTHO05D000309 1.2e-10 70.5 98 35.7
EL10As2g23249 Beta vulgaris HOM05D008388 ORTHO05D000309 1.2e-10 70.5 64 46.9
AUR62035936 Chenopodium quinoa HOM05D008388 ORTHO05D000309 1.2e-10 70.5 128 34.4
EL10Ac7g16617 Beta vulgaris HOM05D008388 ORTHO05D000309 2.0e-10 69.7 100 37.0
EL10Ac8g18741 Beta vulgaris HOM05D008388 ORTHO05D000309 2.0e-10 69.7 100 37.0
BcaC01g02494 Brassica carinata HOM05D009173 ORTHO05D000309 2.0e-10 69.7 118 31.4
EL10Ac9g22515 Beta vulgaris HOM05D008388 ORTHO05D000309 2.7e-10 69.3 41 95.1
EL10Ac3g05389 Beta vulgaris HOM05D008388 ORTHO05D000309 3.5e-10 68.9 71 43.7
BcaB05g22492 Brassica carinata HOM05D007774 ORTHO05D000309 3.5e-10 68.9 93 38.7
BcaB05g22493 Brassica carinata HOM05D007774 ORTHO05D000309 3.5e-10 68.9 93 38.7
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 5.9e-10 68.2 100 36.0
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 7.8e-10 67.8 101 36.6
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 1.0e-09 67.4 104 36.5
EL10As6g23642 Beta vulgaris HOM05D053258 ORTHO05D000880 1.3e-09 67.0 40 65.0
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-09 67.0 100 36.0
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-09 67.0 100 36.0
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-09 66.6 100 36.0
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-09 66.6 117 35.0
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 2.9e-09 65.9 104 35.6
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 2.9e-09 65.9 84 35.7
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 5.0e-09 65.1 100 36.0
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 6.6e-09 64.7 89 37.1
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 8.6e-09 64.3 93 37.6
BcaC08g43001 Brassica carinata HOM05D009173 ORTHO05D000309 8.6e-09 64.3 84 32.1
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 8.6e-09 64.3 105 34.3
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 8.6e-09 64.3 86 32.6
BolC8t49307H Brassica oleracea HOM05D007774 ORTHO05D000309 1.5e-08 63.5 95 37.9
EL10Ac8g19761 Beta vulgaris HOM05D008388 ORTHO05D000309 1.9e-08 63.2 74 39.2
BcaB05g23917 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-08 63.2 94 36.2
C09p37560 Brassica napus HOM05D008073 ORTHO05D000309 1.9e-08 63.2 106 34.0
EL10Ac2g03415 Beta vulgaris HOM05D008388 ORTHO05D000309 2.5e-08 62.8 109 35.8
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-08 62.8 89 32.6
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 2.5e-08 62.8 96 34.4
EL10Ac5g11137 Beta vulgaris HOM05D008388 ORTHO05D000309 3.3e-08 62.4 134 33.6
EL10Ac5g12444 Beta vulgaris HOM05D008388 ORTHO05D000309 3.3e-08 62.4 134 33.6
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-08 62.4 79 36.7
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 4.3e-08 62.0 90 34.4
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 4.3e-08 62.0 90 34.4
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 4.3e-08 62.0 96 34.4
AUR62014141 Chenopodium quinoa HOM05D008388 ORTHO05D000309 4.3e-08 62.0 79 38.0
Lsat_1_v5_gn_8_86741 Lactuca sativa HOM05D009585 ORTHO05D000309 4.3e-08 62.0 61 41.0
Nitab4.5_0000115g0400 Nicotiana tabacum HOM05D001383 ORTHO05D000309 4.3e-08 62.0 69 44.9
EL10Ac4g08343 Beta vulgaris HOM05D008388 ORTHO05D000309 5.6e-08 61.6 109 35.8
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 5.6e-08 61.6 100 34.0
BcaB01g01569 Brassica carinata HOM05D009173 ORTHO05D000309 7.3e-08 61.2 75 36.0
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 7.3e-08 61.2 89 32.6
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 7.3e-08 61.2 89 32.6
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 7.3e-08 61.2 75 33.3
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 7.3e-08 61.2 89 32.6
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 7.3e-08 61.2 89 32.6
BcaC04g20956 Brassica carinata HOM05D008073 ORTHO05D000309 7.3e-08 61.2 97 36.1
BolC9t56587H Brassica oleracea HOM05D008073 ORTHO05D000309 7.3e-08 61.2 97 36.1
Sp5g12640 Schrenkiella parvula HOM05D009173 ORTHO05D000309 7.3e-08 61.2 123 30.9
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 9.5e-08 60.8 77 33.8
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 9.5e-08 60.8 110 33.6
Ah.03g141040 Amaranthus hybridus HOM05D001173 ORTHO05D001047 1.6e-07 60.1 50 48.0
BcaB01g00830 Brassica carinata HOM05D008073 ORTHO05D000309 1.6e-07 60.1 101 36.6
BcaB03g15391 Brassica carinata HOM05D009173 ORTHO05D000309 1.6e-07 60.1 80 35.0
BolC3t19075H Brassica oleracea HOM05D007774 ORTHO05D000309 1.6e-07 60.1 93 36.6
Lsat_1_v5_gn_3_24321 Lactuca sativa HOM05D009585 ORTHO05D000309 1.6e-07 60.1 61 39.3
Nitab4.5_0007977g0060 Nicotiana tabacum HOM05D001383 ORTHO05D000309 1.6e-07 60.1 69 43.5
AUR62036397 Chenopodium quinoa HOM05D008388 ORTHO05D000309 2.1e-07 59.7 103 33.0
COL.COLO4_10433 Corchorus olitorius HOM05D023691 ORTHO05D000309 2.8e-07 59.3 77 42.9
Peaxi162Scf00446g00005 Petunia axillaris HOM05D001383 ORTHO05D000309 3.6e-07 58.9 71 39.4
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 4.7e-07 58.5 99 36.4
Lsat_1_v5_gn_2_57141 Lactuca sativa HOM05D009585 ORTHO05D000309 4.7e-07 58.5 61 39.3
EL10Ac7g17256 Beta vulgaris HOM05D008388 ORTHO05D000309 6.1e-07 58.2 130 33.1
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 6.1e-07 58.2 88 40.9
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 6.1e-07 58.2 73 35.6
AUR62036681 Chenopodium quinoa HOM05D008388 ORTHO05D000309 6.1e-07 58.2 121 32.2
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 8.0e-07 57.8 96 33.3
AUR62013972 Chenopodium quinoa HOM05D008388 ORTHO05D000309 8.0e-07 57.8 127 30.7
Lsat_1_v5_gn_3_72860 Lactuca sativa HOM05D009585 ORTHO05D000309 8.0e-07 57.8 61 39.3
BcaC02g10455 Brassica carinata HOM05D007774 ORTHO05D000309 1.0e-06 57.4 101 32.7
AUR62036087 Chenopodium quinoa HOM05D019594 ORTHO05D000309 1.0e-06 57.4 77 39.0
Lsat_1_v5_gn_1_123660 Lactuca sativa HOM05D009585 ORTHO05D000309 1.0e-06 57.4 59 35.6
Lsat_1_v5_gn_5_164901 Lactuca sativa HOM05D009585 ORTHO05D000309 1.0e-06 57.4 59 35.6
Lsat_1_v5_gn_8_39100 Lactuca sativa HOM05D009585 ORTHO05D000309 1.0e-06 57.4 59 35.6
Lsat_1_v5_gn_8_440 Lactuca sativa HOM05D009585 ORTHO05D000309 1.0e-06 57.4 59 35.6
Lsat_1_v5_gn_1_30700 Lactuca sativa HOM05D009585 ORTHO05D013076 1.4e-06 57.0 59 35.6
Lsat_1_v5_gn_4_139581 Lactuca sativa HOM05D009585 ORTHO05D000309 1.8e-06 56.6 69 34.8
Sp5g18110 Schrenkiella parvula HOM05D009173 ORTHO05D000309 2.3e-06 56.2 77 37.7
BcaB06g26646 Brassica carinata HOM05D007774 ORTHO05D000309 3.0e-06 55.8 89 31.5
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.0e-06 55.5 85 34.1
BcaC02g09596 Brassica carinata HOM05D007774 ORTHO05D000309 5.2e-06 55.1 91 31.9
Nitab4.5_0000101g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.2e-06 55.1 70 38.6
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.2e-06 55.1 85 35.3
Nitab4.5_0002043g0110 Nicotiana tabacum HOM05D001383 ORTHO05D000309 5.2e-06 55.1 66 39.4
Nitab4.5_0007325g0010 Nicotiana tabacum HOM05D001383 ORTHO05D000309 5.2e-06 55.1 80 36.2
BcaC05g26851 Brassica carinata HOM05D007774 ORTHO05D000309 6.8e-06 54.7 71 35.2
COL.COLO4_13767 Corchorus olitorius HOM05D002127 ORTHO05D002274 6.8e-06 54.7 77 40.3
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.8e-06 54.7 69 37.7
Peaxi162Scf00429g00041 Petunia axillaris HOM05D008741 ORTHO05D010787 6.8e-06 54.7 134 32.8
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 6.8e-06 54.7 75 36.0
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.9e-06 54.3 85 34.1
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.9e-06 54.3 69 37.7


User provided reference genes

Program Settings