Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03669 Beta vulgaris HOM05D006099 ORTHO05D007317 7.8e-135 483.8 243 100.0
AUR62020668 Chenopodium quinoa HOM05D006099 ORTHO05D007317 3.2e-88 328.9 266 65.8
Lj7A751T33 Lonicera japonica HOM05D006099 ORTHO05D007317 6.5e-73 278.1 242 61.2
CSS0009505 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 1.4e-72 276.9 247 59.9
CAN.G947.18 Capsicum annuum HOM05D006099 ORTHO05D007317 2.5e-72 276.2 255 56.1
GSVIVG01035588001 Vitis vinifera HOM05D006099 ORTHO05D007317 3.2e-72 275.8 256 57.4
AUR62028064 Chenopodium quinoa HOM05D006099 ORTHO05D007317 9.3e-72 274.2 386 44.6
Sc23g0004430 Simmondsia chinensis HOM05D006099 ORTHO05D007317 9.3e-72 274.2 255 56.9
Dinv37480 Davidia involucrata HOM05D006099 ORTHO05D007317 2.1e-71 273.1 244 59.4
Cfa013234 Carpinus fangiana HOM05D006099 ORTHO05D007317 4.6e-71 271.9 245 58.4
Hma1.2p1_1615F.1_g293710 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 7.9e-71 271.2 232 60.3
Sopen12g032140 Solanum pennellii HOM05D006099 ORTHO05D007317 2.3e-70 269.6 234 59.8
Phvul.001G057000 Phaseolus vulgaris HOM05D006099 ORTHO05D007317 8.7e-70 267.7 248 58.5
CiPaw.07G216100 Carya illinoinensis HOM05D006099 ORTHO05D007317 1.5e-69 266.9 227 60.8
Solyc12g096280.2 Solanum lycopersicum HOM05D006099 ORTHO05D007317 1.5e-69 266.9 238 58.4
Nn4g25135 Nelumbo nucifera HOM05D006099 ORTHO05D007317 2.5e-69 266.2 247 56.7
Ah.11g044160 Amaranthus hybridus HOM05D006099 ORTHO05D007317 4.3e-69 265.4 238 59.2
AL7G20920 Arabidopsis lyrata HOM05D006099 ORTHO05D007317 9.7e-69 264.2 244 56.6
CANSAT25G1623 Cannabis sativa HOM05D006099 ORTHO05D007317 9.7e-69 264.2 250 57.6
Actinidia03572 Actinidia chinensis HOM05D006099 ORTHO05D007317 2.8e-68 262.7 244 57.4
Hund03250 Selenicereus undatus HOM05D006099 ORTHO05D007317 2.8e-68 262.7 252 59.1
BolC3t21124H Brassica oleracea HOM05D006099 ORTHO05D007317 3.7e-68 262.3 242 57.0
Glyma.14G131200 Glycine max HOM05D006099 ORTHO05D007317 4.8e-68 261.9 243 58.4
PGSC0003DMG400029284 Solanum tuberosum HOM05D006099 ORTHO05D007317 4.8e-68 261.9 243 57.6
VMungo0647G0711 Vigna mungo HOM05D006099 ORTHO05D007317 4.8e-68 261.9 248 58.1
Lalb_Chr24g0402361 Lupinus albus HOM05D006099 ORTHO05D007317 6.3e-68 261.5 247 55.9
arahy.Tifrunner.gnm1.ann1.ZJIP4K Arachis hypogaea HOM05D006099 ORTHO05D007317 8.2e-68 261.2 254 56.7
Lsat_1_v5_gn_3_111601 Lactuca sativa HOM05D006099 ORTHO05D007317 8.2e-68 261.2 247 55.5
C03p88160 Brassica napus HOM05D006099 ORTHO05D007317 1.1e-67 260.8 248 56.0
Medtr1g010130 Medicago truncatula HOM05D006099 ORTHO05D007317 1.1e-67 260.8 246 57.7
ECA240G1547 Erigeron canadensis HOM05D006099 ORTHO05D007317 1.4e-67 260.4 249 55.4
AT4G31150 Arabidopsis thaliana HOM05D006099 ORTHO05D007317 1.8e-67 260.0 244 55.3
arahy.Tifrunner.gnm1.ann1.AEW87R Arachis hypogaea HOM05D006099 ORTHO05D007317 1.8e-67 260.0 250 57.6
BraA08t33839Z Brassica rapa HOM05D006099 ORTHO05D007317 2.4e-67 259.6 243 57.2
FvH4_2g30570 Fragaria vesca HOM05D006099 ORTHO05D007317 2.4e-67 259.6 244 57.8
Carub.0007s0938 Capsella rubella HOM05D006099 ORTHO05D007317 4.1e-67 258.8 242 56.6
Ciclev10009104m.g Citrus clementina HOM05D006099 ORTHO05D007317 6.9e-67 258.1 241 55.6
Cc00_g12770 Coffea canephora HOM05D006099 ORTHO05D007317 1.2e-66 257.3 249 54.6
MD08G1132300 Malus domestica HOM05D006099 ORTHO05D007317 1.2e-66 257.3 247 58.3
Thhalv10025966m.g Eutrema salsugineum HOM05D006099 ORTHO05D007317 7.7e-66 254.6 242 54.5
Lj5g0025000 Lotus japonicus HOM05D006099 ORTHO05D007317 1.0e-65 254.2 241 58.5
Nitab4.5_0001159g0110 Nicotiana tabacum HOM05D006099 ORTHO05D007317 1.7e-65 253.4 265 50.9
Manes.15G141100 Manihot esculenta HOM05D006099 ORTHO05D007317 2.2e-65 253.1 233 56.7
Rhsim07G0173500 Rhododendron simsii HOM05D006099 ORTHO05D007317 2.2e-65 253.1 269 51.7
Gohir.D05G068900 Gossypium hirsutum HOM05D006099 ORTHO05D007317 5.0e-65 251.9 247 55.1
Gorai.009G069800 Gossypium raimondii HOM05D006099 ORTHO05D007317 5.0e-65 251.9 247 55.1
Gohir.A05G066400 Gossypium hirsutum HOM05D006099 ORTHO05D007317 8.5e-65 251.1 247 55.1
THA.LOC104803891 Tarenaya hassleriana HOM05D006099 ORTHO05D007317 1.1e-64 250.8 242 55.8
Ca_27927_v3 Cicer arietinum L. HOM05D006099 ORTHO05D007317 1.4e-64 250.4 266 52.6
Sp7g29030 Schrenkiella parvula HOM05D006099 ORTHO05D007317 1.9e-64 250.0 244 54.1
Aa31LG2G19160 Aethionema arabicum HOM05D006099 ORTHO05D007317 3.2e-64 249.2 242 55.4
Potri.018G001000 Populus trichocarpa HOM05D006099 ORTHO05D007317 7.2e-64 248.1 257 52.9
A08p18780 Brassica napus HOM05D006099 ORTHO05D007317 2.7e-63 246.1 267 52.1
BcaB03g12683 Brassica carinata HOM05D006099 ORTHO05D007317 3.6e-63 245.7 235 54.5
FAN15G2948 Fragaria x ananassa HOM05D006099 ORTHO05D007317 7.9e-63 244.6 269 51.7
Manes.15G141200 Manihot esculenta HOM05D006099 ORTHO05D007317 3.0e-62 242.7 235 53.6
Sed0006978 Sechium edule HOM05D006099 ORTHO05D007317 3.0e-62 242.7 244 53.7
Thecc.09G001300 Theobroma cacao HOM05D006099 ORTHO05D007317 3.0e-62 242.7 227 57.7
FAN27G0146 Fragaria x ananassa HOM05D006099 ORTHO05D007317 3.9e-62 242.3 269 51.7
QL12p030880 Quercus lobata HOM05D006099 ORTHO05D007317 3.9e-62 242.3 252 53.2
ATR0626G128 Amborella trichopoda HOM05D006099 ORTHO05D007317 1.1e-61 240.7 254 50.8
Atru.chr7.2710 Acer truncatum HOM05D006099 ORTHO05D007317 2.5e-61 239.6 236 53.8
PSO170G3285 Papaver somniferum HOM05D006099 ORTHO05D007317 4.3e-61 238.8 267 50.2
QL12p030693 Quercus lobata HOM05D006099 ORTHO05D007317 7.4e-61 238.0 251 52.6
Zm00001eb274410 Zea mays HOM05D006099 ORTHO05D007317 7.4e-61 238.0 253 52.2
MELO3C011207.2 Cucumis melo HOM05D006099 ORTHO05D007317 2.2e-60 236.5 271 48.7
PGR142G3206 Punica granatum HOM05D006099 ORTHO05D007317 2.2e-60 236.5 256 51.2
HanXRQChr13g0419861 Helianthus annuus HOM05D006099 ORTHO05D007317 2.8e-60 236.1 240 52.5
Eucgr.C02144 Eucalyptus grandis HOM05D006099 ORTHO05D007317 1.1e-59 234.2 227 57.7
CsaV3_2G031500 Cucumis sativus L. HOM05D006099 ORTHO05D007317 4.1e-59 232.3 244 53.7
Haze_21663 Corylus avellana HOM05D006099 ORTHO05D007317 5.3e-59 231.9 253 51.0
ClCG08G012820 Citrullus lanatus HOM05D006099 ORTHO05D007317 1.2e-58 230.7 253 51.4
Duzib168G0660 Durio zibethinus HOM05D006099 ORTHO05D007317 4.5e-58 228.8 255 50.6
Oeu035175.2 Olea europaea HOM05D006099 ORTHO05D007317 6.5e-57 224.9 233 52.4
Mapoly0013s0098 Marchantia polymorpha HOM05D006099 ORTHO05D007317 2.5e-56 223.0 247 50.6
SGA_v2.0_scaffold27G11694 Striga asiatica HOM05D006099 ORTHO05D007317 4.7e-55 218.8 256 51.6
CSS0007227 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 3.3e-53 212.6 215 55.8
Pp3c6_10670 Physcomitrium patens HOM05D006099 ORTHO05D007317 6.3e-52 208.4 255 46.3
Cpa.g.sc148.13 Carica papaya HOM05D006099 ORTHO05D007317 1.8e-51 206.8 196 57.7
Sabra18G0005300 Salix brachista HOM05D002037 ORTHO05D002762 4.1e-51 205.7 258 46.9
SalBow4G2099 Salvia bowleyana HOM05D006099 ORTHO05D007317 4.1e-51 205.7 250 46.8
TWI32G0633 Tripterygium wilfordii HOM05D006099 ORTHO05D007317 7.0e-51 204.9 209 55.5
DCAR_000694 Daucus carota HOM05D006099 ORTHO05D007317 5.9e-50 201.8 239 49.4
AagrBONN_evm.TU.Sc2ySwM_228.1579 Anthoceros agrestis HOM05D006099 ORTHO05D007317 2.2e-49 199.9 247 43.7
HanXRQChr13g0419831 Helianthus annuus HOM05D006099 ORTHO05D007317 6.5e-49 198.4 138 66.7
RcHm_v2.0_Chr6g0312441 Rosa chinensis HOM05D006099 ORTHO05D007317 2.7e-47 193.0 229 49.3
Hma1.2p1_1615F.1_g293700 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 3.0e-46 189.5 203 52.2
FAN20G1258 Fragaria x ananassa HOM05D006099 ORTHO05D007317 5.2e-46 188.7 268 44.0
FAN20G1767 Fragaria x ananassa HOM05D006099 ORTHO05D007317 5.2e-46 188.7 268 44.0
Peaxi162Scf00876g00025 Petunia axillaris HOM05D006099 ORTHO05D007317 6.7e-46 188.3 226 47.8
SMO351G0465 Selaginella moellendorffii HOM05D006099 ORTHO05D007317 1.3e-44 184.1 246 43.9
PSO063G7181 Papaver somniferum HOM05D006099 ORTHO05D007317 6.3e-44 181.8 154 61.0
FAN24G0140 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.1e-43 181.0 208 52.4
MBI16_g00820_MAGBIO Magnolia biondii HOM05D006099 ORTHO05D007317 3.2e-40 169.5 245 43.3
CBR_g34340 Chara braunii HOM05D006099 ORTHO05D007317 4.7e-39 165.6 216 44.0
Os06g0663600 Oryza sativa ssp. japonica HOM05D006099 ORTHO05D007317 4.7e-39 165.6 155 55.5
CDE06G2693 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 2.0e-37 160.2 186 47.3
Sc23g0004790 Simmondsia chinensis HOM05D006099 ORTHO05D007317 2.6e-37 159.8 244 43.9
Zm00001eb274500 Zea mays HOM05D006099 ORTHO05D007317 7.5e-37 158.3 166 51.8
unitig_32.g10951 Utricularia gibba HOM05D006099 ORTHO05D007317 2.2e-36 156.8 126 62.7
HPP92_011639 Vanilla planifolia HOM05D006099 ORTHO05D007317 4.8e-36 155.6 161 50.9
Zm00001eb274550 Zea mays HOM05D006099 ORTHO05D007317 4.5e-34 149.1 156 52.6
CARHR239060 Cardamine hirsuta HOM05D006099 ORTHO05D007317 4.2e-32 142.5 104 68.3
vmacro05090 Vaccinium macrocarpon HOM05D006099 ORTHO05D007317 1.4e-30 137.5 147 51.7
Migut.A00464 Erythranthe guttata HOM05D006099 ORTHO05D007317 5.7e-29 132.1 141 51.1
Zm00001eb442290 Zea mays HOM05D006099 ORTHO05D007317 2.2e-28 130.2 124 53.2
Nitab4.5_0001327g0030 Nicotiana tabacum HOM05D006099 ORTHO05D007317 8.3e-28 128.3 108 59.3
BcaC04g20481 Brassica carinata HOM05D006099 ORTHO05D007317 1.1e-27 127.9 139 50.4
C09p43040 Brassica napus HOM05D006099 ORTHO05D007317 1.1e-27 127.9 139 50.4
BolC6t36631H Brassica oleracea HOM05D006099 ORTHO05D007317 1.1e-27 127.9 139 50.4
BcaC08g44050 Brassica carinata HOM05D006099 ORTHO05D007317 2.4e-27 126.7 139 50.4
Psat6g031520 Pisum sativum HOM05D006099 ORTHO05D007317 1.6e-26 124.0 138 49.3
C03p41630 Brassica napus HOM05D006099 ORTHO05D007317 1.2e-23 114.4 126 49.2
Prupe.1G463600 Prunus persica HOM05D006099 ORTHO05D007317 1.7e-20 104.0 132 46.2
MCO10G112 Micromonas commoda HOM05D006099 ORTHO05D007317 8.3e-20 101.7 277 30.7
RcHm_v2.0_Chr6g0312501 Rosa chinensis HOM05D006099 ORTHO05D007317 1.1e-19 101.3 177 41.2
TPR.G3995 Trifolium pratense HOM05D006099 ORTHO05D007317 1.1e-19 101.3 56 78.6
TPR.G30957 Trifolium pratense HOM05D006099 ORTHO05D007317 1.2e-18 97.8 82 67.1
HPP92_011638 Vanilla planifolia HOM05D006099 ORTHO05D007317 2.0e-18 97.1 72 63.9
TAR626G0599 Trochodendron aralioides HOM05D006099 ORTHO05D007317 5.6e-16 89.0 216 28.7
SHI15000 Sapria himalayana HOM05D000105 ORTHO05D000023 3.6e-15 86.3 166 36.7
Migut.A00463 Erythranthe guttata HOM05D006099 ORTHO05D007317 4.0e-14 82.8 99 45.5
MSTRG.11825 Avicennia marina HOM05D006099 ORTHO05D007317 5.2e-14 82.4 87 48.3
Cre07.g346100 Chlamydomonas reinhardtii HOM05D006099 ORTHO05D007317 9.8e-13 78.2 236 27.5
QL02p066379 Quercus lobata HOM05D006099 ORTHO05D007317 4.9e-12 75.9 68 57.4
Zm00001eb274520 Zea mays HOM05D006099 ORTHO05D007317 4.9e-12 75.9 74 54.1
SHI15001 Sapria himalayana HOM05D006099 ORTHO05D007317 8.3e-12 75.1 74 48.6
TPR.G26527 Trifolium pratense HOM05D006099 ORTHO05D007317 1.9e-11 73.9 82 47.6
HPP92_011640 Vanilla planifolia HOM05D006099 ORTHO05D007317 1.6e-10 70.9 59 54.2
unitig_32.g10950 Utricularia gibba HOM05D006099 ORTHO05D007317 5.0e-09 65.9 70 50.0
SHI14999 Sapria himalayana HOM05D005377 ORTHO05D003034 2.1e-07 60.5 43 65.1
SalBow8G2774 Salvia bowleyana HOM05D002799 ORTHO05D007076 6.8e-06 55.5 37 67.6


User provided reference genes

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