Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03667 Beta vulgaris HOM05D007342 ORTHO05D009252 1.0e-223 780.0 470 100.0
AUR62020686 Chenopodium quinoa HOM05D007342 ORTHO05D009252 5.9e-115 418.7 439 57.9
AUR62028039 Chenopodium quinoa HOM05D007342 ORTHO05D009252 4.7e-112 409.1 439 55.6
Hund19378 Selenicereus undatus HOM05D007342 ORTHO05D009252 1.9e-65 254.2 426 42.7
Ah.11g044170 Amaranthus hybridus HOM05D007342 ORTHO05D009252 8.4e-45 185.7 320 40.6
Sc19g0005330 Simmondsia chinensis HOM05D007342 ORTHO05D009252 9.4e-28 129.0 455 30.3
Dinv29744 Davidia involucrata HOM05D007342 ORTHO05D009252 1.0e-18 99.0 425 26.4
COL.COLO4_13866 Corchorus olitorius HOM05D007342 ORTHO05D009252 1.4e-18 98.6 412 28.4
Actinidia00019 Actinidia chinensis HOM05D007342 ORTHO05D009252 1.8e-18 98.2 455 33.4
CSS0019788 Camellia sinensis var. sinensis HOM05D007342 ORTHO05D009252 1.1e-17 95.5 438 29.0
Thecc.04G285100 Theobroma cacao HOM05D007342 ORTHO05D009252 1.7e-16 91.7 323 29.4
TWI53G0473 Tripterygium wilfordii HOM05D007342 ORTHO05D009252 2.2e-16 91.3 442 29.0
Duzib212G0754 Durio zibethinus HOM05D007342 ORTHO05D009252 2.8e-16 90.9 448 27.7
Gohir.A09G238800 Gossypium hirsutum HOM05D007342 ORTHO05D009252 2.4e-15 87.8 438 29.0
PGSC0003DMG400006281 Solanum tuberosum HOM05D007342 ORTHO05D009252 2.4e-15 87.8 456 29.4
Gorai.006G262500 Gossypium raimondii HOM05D007342 ORTHO05D009252 4.1e-15 87.0 433 28.4
QL06p008994 Quercus lobata HOM05D007342 ORTHO05D009252 7.0e-15 86.3 392 27.6
MSTRG.10096 Avicennia marina HOM05D007342 ORTHO05D009252 9.1e-15 85.9 432 27.3
Nn4g25834 Nelumbo nucifera HOM05D007342 ORTHO05D009252 4.5e-14 83.6 449 25.4
Solyc01g080760.4 Solanum lycopersicum HOM05D007342 ORTHO05D009252 1.0e-13 82.4 488 28.1
Peaxi162Scf01123g00234 Petunia axillaris HOM05D007342 ORTHO05D009252 1.3e-13 82.0 356 26.7
Lj3P820T26 Lonicera japonica HOM05D007342 ORTHO05D009252 8.5e-13 79.3 433 29.8
Actinidia14301 Actinidia chinensis HOM05D007342 ORTHO05D009252 1.1e-12 79.0 440 30.2
Aqoxy5G00727 Aquilegia oxysepala HOM05D007342 ORTHO05D009252 4.2e-12 77.0 468 27.1
Cc03_g01870 Coffea canephora HOM05D007342 ORTHO05D009252 4.2e-12 77.0 361 28.3
GSVIVG01017735001 Vitis vinifera HOM05D007342 ORTHO05D009252 5.5e-12 76.6 441 26.5
Ciclev10004639m.g Citrus clementina HOM05D007342 ORTHO05D009252 1.2e-11 75.5 408 26.7
Sopen01g030760 Solanum pennellii HOM05D007342 ORTHO05D009252 2.7e-11 74.3 488 26.4
ClCG06G005120 Citrullus lanatus HOM05D007342 ORTHO05D009252 8.0e-11 72.8 453 27.2
FvH4_4g18220 Fragaria vesca HOM05D007342 ORTHO05D009252 8.0e-11 72.8 314 28.3
FAN12G3549 Fragaria x ananassa HOM05D007342 ORTHO05D009252 8.0e-11 72.8 314 28.3
Cpa.g.sc16.174 Carica papaya HOM05D007342 ORTHO05D009252 5.2e-10 70.1 442 26.2
RcHm_v2.0_Chr4g0422351 Rosa chinensis HOM05D007342 ORTHO05D009252 5.2e-10 70.1 447 27.1
Glyma.17G026800 Glycine max HOM05D007342 ORTHO05D009252 6.8e-10 69.7 392 28.6
PSO210G2737 Papaver somniferum HOM05D007342 ORTHO05D009252 8.8e-10 69.3 463 26.1
Glyma.07G247200 Glycine max HOM05D007342 ORTHO05D009252 2.6e-09 67.8 407 27.3
Lj3P817T41 Lonicera japonica HOM05D007342 ORTHO05D009252 2.6e-09 67.8 254 31.5
Haze_01197 Corylus avellana HOM05D007342 ORTHO05D009252 3.4e-09 67.4 331 28.1
Gohir.D09G239700 Gossypium hirsutum HOM05D007342 ORTHO05D009252 3.4e-09 67.4 448 26.3
Nitab4.5_0000059g0470 Nicotiana tabacum HOM05D007342 ORTHO05D009252 1.3e-08 65.5 455 25.5
Nitab4.5_0000191g0200 Nicotiana tabacum HOM05D007342 ORTHO05D009252 1.3e-08 65.5 467 26.1
FAN12G0202 Fragaria x ananassa HOM05D007342 ORTHO05D009252 2.2e-08 64.7 403 26.3
Medtr4g119920 Medicago truncatula HOM05D007342 ORTHO05D009252 6.3e-08 63.2 444 24.8
ECA240G4261 Erigeron canadensis HOM05D007342 ORTHO05D009252 1.4e-07 62.0 430 26.3
Sed0007886 Sechium edule HOM05D007342 ORTHO05D009252 1.4e-07 62.0 390 26.4
Ca_21491_v3 Cicer arietinum L. HOM05D005283 ORTHO05D006769 2.4e-07 61.2 409 26.4
Cfa015389 Carpinus fangiana HOM05D007342 ORTHO05D009252 3.1e-07 60.8 436 25.5
CsaV3_6G022280 Cucumis sativus L. HOM05D007342 ORTHO05D009252 4.1e-07 60.5 398 25.4
Manes.03G195600 Manihot esculenta HOM05D007342 ORTHO05D009252 4.1e-07 60.5 430 26.5
FAN17G1678 Fragaria x ananassa HOM05D007342 ORTHO05D009252 9.1e-07 59.3 401 24.9
Potri.008G222000 Populus trichocarpa HOM05D007342 ORTHO05D009252 1.2e-06 58.9 397 27.5
Prupe.1G135700 Prunus persica HOM05D007342 ORTHO05D009252 1.2e-06 58.9 450 25.8
Atru.chr4.2846 Acer truncatum HOM05D007342 ORTHO05D009252 1.6e-06 58.5 407 25.3
SGA_v2.0_scaffold67G22631 Striga asiatica HOM05D007342 ORTHO05D009252 1.6e-06 58.5 401 25.9
SalBow2G3523 Salvia bowleyana HOM05D007342 ORTHO05D009252 2.0e-06 58.2 416 28.8


User provided reference genes

Program Settings