Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03634 Beta vulgaris HOM05D004385 ORTHO05D005245 0.0e+00 1402.9 690 100.0
EL10Ac2g03633 Beta vulgaris HOM05D004385 ORTHO05D005245 8.9e-277 956.8 497 95.2
EL10Ac2g03632 Beta vulgaris HOM05D004385 ORTHO05D005245 1.7e-235 819.7 496 83.5
AUR62028006 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.0e-220 769.6 520 74.2
AUR62020716 Chenopodium quinoa HOM05D004385 ORTHO05D005245 6.1e-217 758.1 496 76.4
EL10Ac2g03630 Beta vulgaris HOM05D004385 ORTHO05D005245 4.5e-188 662.1 528 65.0
Ah.11g043630 Amaranthus hybridus HOM05D004385 ORTHO05D005245 3.2e-186 656.0 524 64.3
AUR62028001 Chenopodium quinoa HOM05D004385 ORTHO05D005245 3.6e-185 652.5 523 64.6
EL10Ac2g03631 Beta vulgaris HOM05D004385 ORTHO05D005245 6.8e-176 621.7 463 65.2
AUR62028000 Chenopodium quinoa HOM05D004385 ORTHO05D005245 6.8e-176 621.7 475 65.1
Hund03234 Selenicereus undatus HOM05D004385 ORTHO05D005245 8.0e-169 598.2 521 59.9
Dinv26468 Davidia involucrata HOM05D004385 ORTHO05D005245 1.4e-168 597.4 496 60.7
Hma1.2p1_0284F.1_g113840 Hydrangea macrophylla HOM05D004385 ORTHO05D005245 5.2e-168 595.5 461 63.6
Medtr4g068230 Medicago truncatula HOM05D004385 ORTHO05D005245 1.2e-167 594.3 473 62.8
CANSAT80G1931 Cannabis sativa HOM05D004385 ORTHO05D005245 2.0e-167 593.6 526 57.2
Ca_20811_v3 Cicer arietinum L. HOM05D004385 ORTHO05D005245 1.7e-166 590.5 467 62.3
Medtr4g068240 Medicago truncatula HOM05D004385 ORTHO05D005245 8.3e-166 588.2 504 59.9
Atru.chr7.972_Atru.chr7.973 Acer truncatum HOM05D004385 ORTHO05D005245 1.1e-165 587.8 472 61.4
Medtr4g068270 Medicago truncatula HOM05D004385 ORTHO05D005245 3.2e-165 586.3 504 59.5
Lj3g0012868 Lotus japonicus HOM05D004385 ORTHO05D005245 5.4e-165 585.5 471 61.8
Prupe.1G065500 Prunus persica HOM05D004385 ORTHO05D005245 7.0e-165 585.1 471 60.1
Glyma.12G049000 Glycine max HOM05D004385 ORTHO05D005245 1.2e-164 584.3 473 62.2
Potri.018G138206 Populus trichocarpa HOM05D004385 ORTHO05D005245 4.5e-164 582.4 471 61.1
Thecc.09G194100 Theobroma cacao HOM05D004385 ORTHO05D005245 5.9e-164 582.0 521 57.0
Cpa.g.sc123.33 Carica papaya HOM05D004385 ORTHO05D005245 7.8e-164 581.6 479 60.5
Gohir.A05G001100 Gossypium hirsutum HOM05D004385 ORTHO05D005245 7.8e-164 581.6 473 62.8
Phvul.011G051400 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 1.0e-163 581.3 471 61.8
TPR.G34256 Trifolium pratense HOM05D004385 ORTHO05D005245 1.0e-163 581.3 473 61.9
Psat0s5298g0040 Pisum sativum HOM05D004385 ORTHO05D005245 1.3e-163 580.9 495 59.8
FvH4_4g06230 Fragaria vesca HOM05D004385 ORTHO05D005245 1.7e-163 580.5 521 56.0
Gohir.D05G001400 Gossypium hirsutum HOM05D004385 ORTHO05D005245 1.7e-163 580.5 473 62.8
arahy.Tifrunner.gnm1.ann1.77JVZB Arachis hypogaea HOM05D004385 ORTHO05D005245 2.3e-163 580.1 489 59.7
arahy.Tifrunner.gnm1.ann1.D17V0C Arachis hypogaea HOM05D004385 ORTHO05D005245 3.9e-163 579.3 473 61.5
Gorai.009G001300 Gossypium raimondii HOM05D004385 ORTHO05D005245 6.6e-163 578.6 473 62.6
MD16G1239400 Malus domestica HOM05D004385 ORTHO05D005245 6.6e-163 578.6 525 55.4
RcHm_v2.0_Chr4g0397951 Rosa chinensis HOM05D004385 ORTHO05D005245 8.6e-163 578.2 508 56.9
TWI32G0217 Tripterygium wilfordii HOM05D004385 ORTHO05D005245 8.6e-163 578.2 490 59.4
QL11p009243 Quercus lobata HOM05D004385 ORTHO05D005245 1.5e-162 577.4 518 56.4
CANSAT80G0643 Cannabis sativa HOM05D004385 ORTHO05D005245 1.9e-162 577.0 511 56.0
AUR62027997 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.5e-162 576.6 472 61.2
VMungo1127G2221 Vigna mungo HOM05D004385 ORTHO05D005245 2.5e-162 576.6 514 58.6
TAR626G1834 Trochodendron aralioides HOM05D004385 ORTHO05D005245 6.1e-161 572.0 466 60.5
Oeu028831.1 Olea europaea HOM05D004385 ORTHO05D005245 1.0e-160 571.2 506 58.9
Manes.03G078300 Manihot esculenta HOM05D004385 ORTHO05D005245 3.1e-160 569.7 471 59.9
Haze_19053 Corylus avellana HOM05D004385 ORTHO05D005245 2.0e-159 567.0 500 56.2
Manes.03G078400 Manihot esculenta HOM05D004385 ORTHO05D005245 2.0e-159 567.0 466 61.2
FAN12G0289 Fragaria x ananassa HOM05D004385 ORTHO05D005245 4.4e-159 565.8 549 53.2
Phvul.011G051300 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 4.4e-159 565.8 471 60.5
Lalb_Chr19g0138471 Lupinus albus HOM05D004385 ORTHO05D005245 5.8e-159 565.5 467 60.4
COL.COLO4_24913 Corchorus olitorius HOM05D004385 ORTHO05D005245 2.2e-158 563.5 523 55.6
vmacro22292 Vaccinium macrocarpon HOM05D004385 ORTHO05D005245 6.4e-158 562.0 507 56.4
ECA240G2514 Erigeron canadensis HOM05D004385 ORTHO05D005245 1.1e-157 561.2 468 59.8
DCAR_023663 Daucus carota HOM05D004385 ORTHO05D005245 1.9e-157 560.5 475 59.6
Sopen07g005830 Solanum pennellii HOM05D004385 ORTHO05D005245 1.9e-157 560.5 470 59.1
Duzib168G1467 Durio zibethinus HOM05D004385 ORTHO05D005245 4.1e-157 559.3 452 60.8
MSTRG.10464 Avicennia marina HOM05D004385 ORTHO05D005245 7.0e-157 558.5 475 59.8
Nn1g09800 Nelumbo nucifera HOM05D004385 ORTHO05D005245 1.2e-156 557.8 474 58.2
Rhsim05G0069600 Rhododendron simsii HOM05D004385 ORTHO05D005245 3.5e-156 556.2 515 56.1
Cc00_g00420 Coffea canephora HOM05D004385 ORTHO05D005245 6.0e-156 555.4 477 58.9
Haze_19054 Corylus avellana HOM05D004385 ORTHO05D005245 6.0e-156 555.4 522 55.4
Lsat_1_v5_gn_7_57600 Lactuca sativa HOM05D004385 ORTHO05D005245 1.3e-155 554.3 478 57.9
CSS0002376 Camellia sinensis var. sinensis HOM05D004385 ORTHO05D005245 1.7e-155 553.9 488 57.6
VMungo1127G1209 Vigna mungo HOM05D004385 ORTHO05D005245 1.7e-155 553.9 473 59.4
Cc00_g00450 Coffea canephora HOM05D004385 ORTHO05D005245 2.3e-155 553.5 477 58.7
HanXRQChr03g0067331 Helianthus annuus HOM05D004385 ORTHO05D005245 2.3e-155 553.5 520 54.6
Eucgr.C02022 Eucalyptus grandis HOM05D004385 ORTHO05D005245 3.0e-155 553.1 466 59.9
Cpa.g.sc123.32 Carica papaya HOM05D004385 ORTHO05D005245 3.9e-155 552.7 498 56.6
Sed0013454 Sechium edule HOM05D004385 ORTHO05D005245 5.0e-155 552.4 469 58.6
SGA_v2.0_scaffold21G09624 Striga asiatica HOM05D004385 ORTHO05D005245 5.0e-155 552.4 464 60.6
CsaV3_2G035400 Cucumis sativus L. HOM05D004385 ORTHO05D005245 8.6e-155 551.6 469 58.0
EL10Ac2g04866 Beta vulgaris HOM05D004385 ORTHO05D005245 1.2e-153 547.7 477 58.7
Phvul.011G051100 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 1.2e-153 547.7 471 59.7
ClCG06G014070 Citrullus lanatus HOM05D004385 ORTHO05D005245 1.6e-153 547.4 467 58.7
ClCG06G014050 Citrullus lanatus HOM05D004385 ORTHO05D005245 3.6e-153 546.2 511 54.4
Migut.B00849 Erythranthe guttata HOM05D004385 ORTHO05D005245 1.1e-152 544.7 459 60.8
EL10Ac2g04868 Beta vulgaris HOM05D004385 ORTHO05D005245 2.0e-151 540.4 482 57.7
PGR142G0778 Punica granatum HOM05D004385 ORTHO05D005245 4.4e-151 539.3 467 58.0
Sed0010902 Sechium edule HOM05D004385 ORTHO05D005245 7.5e-151 538.5 519 52.6
CiPaw.15G156000 Carya illinoinensis HOM05D004385 ORTHO05D005245 2.9e-150 536.6 465 58.5
Ah.11g043620 Amaranthus hybridus HOM05D004385 ORTHO05D005245 3.7e-150 536.2 454 60.4
MBI11_g07424_MAGBIO Magnolia biondii HOM05D004385 ORTHO05D005245 8.3e-150 535.0 474 56.5
MELO3C019214.2 Cucumis melo HOM05D004385 ORTHO05D005245 1.9e-149 533.9 508 53.3
TPR.G10229 Trifolium pratense HOM05D004385 ORTHO05D005245 2.4e-149 533.5 600 50.3
Sed0018057 Sechium edule HOM05D004385 ORTHO05D005245 7.1e-149 531.9 468 57.1
Sed0010048 Sechium edule HOM05D004385 ORTHO05D005245 1.6e-148 530.8 475 55.8
Psat0s8631g0040 Pisum sativum HOM05D004385 ORTHO05D005245 6.0e-148 528.9 469 56.7
Nitab4.5_0001205g0010 Nicotiana tabacum HOM05D004385 ORTHO05D005245 5.6e-146 522.3 474 57.0
Nitab4.5_0000413g0040 Nicotiana tabacum HOM05D004385 ORTHO05D005245 2.8e-145 520.0 474 56.5
HanXRQChr03g0067221 Helianthus annuus HOM05D004385 ORTHO05D005245 1.1e-144 518.1 470 54.7
Sabra18G0119900 Salix brachista HOM05D004385 ORTHO05D005245 2.3e-144 516.9 489 55.6
ECA240G4307 Erigeron canadensis HOM05D004385 ORTHO05D005245 1.5e-143 514.2 471 54.8
HPP92_003174 Vanilla planifolia HOM05D004385 ORTHO05D005245 2.0e-143 513.8 471 55.4
Peaxi162Scf00320g00411 Petunia axillaris HOM05D004385 ORTHO05D005245 9.9e-143 511.5 481 51.1
Peaxi162Scf00320g00412 Petunia axillaris HOM05D004385 ORTHO05D005245 1.7e-142 510.8 474 56.5
HanXRQChr03g0067391 Helianthus annuus HOM05D004385 ORTHO05D005245 9.2e-141 505.0 499 51.5
Potri.018G145600 Populus trichocarpa HOM05D004385 ORTHO05D005245 8.6e-139 498.4 400 61.2
Solyc07g015980.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 5.8e-135 485.7 498 52.2
ATR1147G022 Amborella trichopoda HOM05D004385 ORTHO05D005245 2.2e-134 483.8 500 50.2
Migut.L01912 Erythranthe guttata HOM05D004385 ORTHO05D005245 1.9e-133 480.7 386 63.2
Peaxi162Scf00320g00316 Petunia axillaris HOM05D004385 ORTHO05D005245 2.4e-133 480.3 472 51.1
Sc06g0001470 Simmondsia chinensis HOM05D004385 ORTHO05D005245 3.9e-131 473.0 373 61.9
CDE06G1948 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 6.2e-129 465.7 454 52.2
RhsimUnG0051500 Rhododendron simsii HOM05D004385 ORTHO05D005245 1.4e-128 464.5 471 53.9
Atru.chr9.1512 Acer truncatum HOM05D004385 ORTHO05D005245 4.2e-125 453.0 492 52.2
SEGI_12293 Sequoiadendron giganteum HOM05D004385 ORTHO05D005245 1.2e-124 451.4 469 50.5
Peaxi162Scf00320g00317 Petunia axillaris HOM05D004385 ORTHO05D005245 2.1e-124 450.7 435 51.3
Mapoly0055s0075 Marchantia polymorpha HOM05D004385 ORTHO05D005245 5.6e-122 442.6 486 48.1
Cpa.g.sc123.30 Carica papaya HOM05D004385 ORTHO05D005245 5.3e-120 436.0 467 49.0
Rhsim01G0218300 Rhododendron simsii HOM05D004385 ORTHO05D005245 9.0e-120 435.3 359 61.6
Rhsim03G0268600 Rhododendron simsii HOM05D004385 ORTHO05D005245 3.2e-117 426.8 429 51.7
SGA_v2.0_scaffold21G09621 Striga asiatica HOM05D004385 ORTHO05D005245 1.8e-115 421.0 422 50.0
Cpa.g.sc123.31 Carica papaya HOM05D004385 ORTHO05D005245 5.1e-115 419.5 449 51.2
AagrBONN_evm.TU.Sc2ySwM_117.1864 Anthoceros agrestis HOM05D004385 ORTHO05D005245 8.7e-115 418.7 480 45.8
Pp3c15_21680 Physcomitrium patens HOM05D004385 ORTHO05D005245 1.4e-112 411.4 487 45.4
Zm00001eb064440 Zea mays HOM05D004385 ORTHO05D005245 7.6e-111 405.6 377 52.8
TPR.G34194 Trifolium pratense HOM05D004385 ORTHO05D005245 5.1e-107 392.9 329 61.1
PGSC0003DMG400021019 Solanum tuberosum HOM05D004385 ORTHO05D005245 2.6e-103 380.6 345 56.5
Atru.chr9.1488 Acer truncatum HOM05D004385 ORTHO05D005245 8.7e-99 365.5 370 53.2
PGSC0003DMG400022081 Solanum tuberosum HOM05D004385 ORTHO05D005245 1.3e-97 361.7 442 44.8
Cfa020737 Carpinus fangiana HOM05D004385 ORTHO05D005245 1.1e-96 358.6 313 56.5
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 6.9e-96 355.9 626 35.6
TAR626G1477 Trochodendron aralioides HOM05D004385 ORTHO05D005245 6.9e-96 355.9 291 60.1
Haze_18802 Corylus avellana HOM05D004385 ORTHO05D005245 7.7e-95 352.4 375 51.7
CsaV3_1G004600 Cucumis sativus L. HOM05D004385 ORTHO05D005245 1.4e-91 341.7 283 61.1
Solyc07g016050.3 Solanum lycopersicum HOM05D004385 ORTHO05D005245 1.3e-89 335.1 324 50.3
unitig_578.g16395 Utricularia gibba HOM05D004385 ORTHO05D005245 6.3e-89 332.8 312 53.8
CAN.G1581.3 Capsicum annuum HOM05D004385 ORTHO05D005245 5.3e-88 329.7 316 54.1
FAN17G2530 Fragaria x ananassa HOM05D004385 ORTHO05D005245 6.9e-88 329.3 331 53.8
EL10Ac6g13794 Beta vulgaris HOM05D004385 ORTHO05D005245 1.4e-83 315.1 269 61.3
Aqoxy2G04068 Aquilegia oxysepala HOM05D004385 ORTHO05D005245 4.4e-82 310.1 413 44.3
Migut.L00572 Erythranthe guttata HOM05D004385 ORTHO05D005245 4.5e-79 300.1 231 60.2
Migut.L00391 Erythranthe guttata HOM05D004385 ORTHO05D005245 5.2e-75 286.6 222 59.0
Solyc07g016080.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 2.2e-73 281.2 276 48.2
CDE06G1657 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 1.0e-70 272.3 432 39.4
Cre02.g105150 Chlamydomonas reinhardtii HOM05D004385 ORTHO05D005245 6.5e-62 243.0 596 31.5
PRCOL_00000420 Prasinoderma coloniale HOM05D004385 ORTHO05D005245 7.5e-58 229.6 470 33.8
AUR62020718 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.8e-56 224.9 177 62.1
Solyc07g016030.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 1.0e-54 219.2 329 37.7
MELO3C017386.2 Cucumis melo HOM05D004385 ORTHO05D005245 2.3e-54 218.0 169 62.7
AUR62028003 Chenopodium quinoa HOM05D004385 ORTHO05D005245 5.6e-53 213.4 192 57.3
CAN.G1581.2 Capsicum annuum HOM05D004385 ORTHO05D005245 7.3e-53 213.0 147 67.3
FAN07G2444 Fragaria x ananassa HOM05D004385 ORTHO05D005245 7.3e-53 213.0 147 66.0
FAN22G1494 Fragaria x ananassa HOM05D004385 ORTHO05D005245 8.0e-52 209.5 147 65.3
SalBow5G2207 Salvia bowleyana HOM05D004385 ORTHO05D005245 6.8e-51 206.5 176 57.4
Psat1g029120 Pisum sativum HOM05D000870 ORTHO05D000715 2.0e-50 204.9 147 64.6
Sopen07g016620 Solanum pennellii HOM05D004385 ORTHO05D005245 1.7e-46 191.8 145 61.4
AUR62020720 Chenopodium quinoa HOM05D004385 ORTHO05D005245 3.3e-45 187.6 157 56.7
Sopen00g013700 Solanum pennellii HOM05D004385 ORTHO05D005245 7.3e-45 186.4 149 57.7
AUR62028004 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.8e-43 181.8 129 65.1
unitig_578.g16396 Utricularia gibba HOM05D004385 ORTHO05D005245 5.8e-42 176.8 125 68.0
Solyc07g016020.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 4.9e-41 173.7 152 55.3
AUR62020721 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.1e-36 158.3 103 68.0
Solyc07g016040.3 Solanum lycopersicum HOM05D004385 ORTHO05D005245 3.1e-35 154.5 120 60.8
Sopen07g016630 Solanum pennellii HOM05D004385 ORTHO05D005245 1.3e-30 139.0 207 42.0
Solyc07g032590.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 2.6e-26 124.8 141 50.4
Psat0s3373g0120 Pisum sativum HOM05D000870 ORTHO05D005245 5.8e-26 123.6 147 43.5
AUR62027998 Chenopodium quinoa HOM05D004385 ORTHO05D005245 8.4e-17 93.2 107 44.9
PGSC0003DMG400007349 Solanum tuberosum HOM05D004385 ORTHO05D005245 2.1e-15 88.6 59 61.0
Medtr5g096240 Medicago truncatula HOM05D004385 ORTHO05D005245 1.7e-09 68.9 75 49.3
Medtr4g117010 Medicago truncatula HOM05D004385 ORTHO05D005245 3.8e-09 67.8 75 48.0
GSVIVG01026776001 Vitis vinifera HOM05D004385 ORTHO05D005245 1.4e-08 65.9 50 54.0
EL10As1g23108 Beta vulgaris HOM05D004385 ORTHO05D089102 1.3e-06 59.3 40 77.5
Oeu000968.1 Olea europaea HOM05D004385 ORTHO05D005245 5.1e-06 57.4 53 56.6


User provided reference genes

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