Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03578 Beta vulgaris HOM05D005690 ORTHO05D007075 1.1e-127 459.9 230 100.0
AUR62020766 Chenopodium quinoa HOM05D005690 ORTHO05D007075 6.7e-104 380.9 219 85.4
AUR62027946 Chenopodium quinoa HOM05D005690 ORTHO05D007075 1.5e-103 379.8 219 84.9
Hund19342 Selenicereus undatus HOM05D005690 ORTHO05D007075 6.3e-94 347.8 218 80.3
Ah.16g108410 Amaranthus hybridus HOM05D005690 ORTHO05D007075 1.3e-91 340.1 218 79.4
Potri.010G219000 Populus trichocarpa HOM05D005690 ORTHO05D007075 1.9e-82 309.7 198 76.8
Potri.010G219400 Populus trichocarpa HOM05D005690 ORTHO05D007075 1.9e-82 309.7 198 76.8
Lalb_Chr19g0129571 Lupinus albus HOM05D005690 ORTHO05D007075 2.5e-82 309.3 226 69.5
TWI38G1302 Tripterygium wilfordii HOM05D005690 ORTHO05D007075 4.2e-82 308.5 223 71.7
Gohir.A06G178200 Gossypium hirsutum HOM05D005690 ORTHO05D007075 9.4e-82 307.4 224 71.4
Sabra10G0169300 Salix brachista HOM05D005690 ORTHO05D007075 1.2e-81 307.0 221 70.1
MD07G1177900 Malus domestica HOM05D005690 ORTHO05D007075 2.7e-81 305.8 219 70.8
Cfa001602 Carpinus fangiana HOM05D005690 ORTHO05D007075 1.8e-80 303.1 223 70.9
Gorai.010G204700 Gossypium raimondii HOM05D005690 ORTHO05D007075 2.3e-80 302.8 224 70.5
Prupe.2G217200 Prunus persica HOM05D005690 ORTHO05D007075 2.3e-80 302.8 224 69.2
Gohir.D06G176800 Gossypium hirsutum HOM05D005690 ORTHO05D007075 5.2e-80 301.6 224 70.1
GSVIVG01016316001 Vitis vinifera HOM05D005690 ORTHO05D007075 1.2e-79 300.4 220 70.5
Nn2g13015 Nelumbo nucifera HOM05D005690 ORTHO05D007075 1.5e-79 300.1 189 78.8
Manes.07G103000 Manihot esculenta HOM05D005690 ORTHO05D007075 2.6e-79 299.3 204 74.0
Thecc.10G069500 Theobroma cacao HOM05D005690 ORTHO05D007075 2.6e-79 299.3 197 75.1
MD01G1111700 Malus domestica HOM05D005690 ORTHO05D007075 3.3e-79 298.9 219 69.9
TAR636G2049 Trochodendron aralioides HOM05D005690 ORTHO05D007075 7.5e-79 297.7 203 72.4
CiPaw.02G175700 Carya illinoinensis HOM05D005690 ORTHO05D007075 1.3e-78 297.0 219 69.9
Potri.008G042800 Populus trichocarpa HOM05D005690 ORTHO05D007075 1.7e-78 296.6 199 73.4
Ciclev10032614m.g Citrus clementina HOM05D005690 ORTHO05D007075 2.8e-78 295.8 213 70.9
Peaxi162Scf00108g00166 Petunia axillaris HOM05D005690 ORTHO05D007075 4.8e-78 295.0 188 77.7
Haze_16926 Corylus avellana HOM05D005690 ORTHO05D007075 6.3e-78 294.7 223 70.9
FvH4_7g20020 Fragaria vesca HOM05D005690 ORTHO05D007075 6.3e-78 294.7 221 68.8
FAN03G1698 Fragaria x ananassa HOM05D005690 ORTHO05D007075 6.3e-78 294.7 221 68.8
FAN06G0212 Fragaria x ananassa HOM05D005690 ORTHO05D007075 6.3e-78 294.7 221 68.8
Solyc05g056090.3 Solanum lycopersicum HOM05D005690 ORTHO05D007075 6.3e-78 294.7 193 75.1
Sopen05g034500 Solanum pennellii HOM05D005690 ORTHO05D007075 6.3e-78 294.7 193 75.1
Dinv11797 Davidia involucrata HOM05D005690 ORTHO05D007075 8.2e-78 294.3 227 67.0
Duzib114G0556 Durio zibethinus HOM05D005690 ORTHO05D007075 8.2e-78 294.3 223 65.9
Sabra08G0029500 Salix brachista HOM05D005690 ORTHO05D007075 1.1e-77 293.9 200 72.5
Nitab4.5_0000233g0230 Nicotiana tabacum HOM05D005690 ORTHO05D007075 1.8e-77 293.1 221 68.8
PGSC0003DMG400023460 Solanum tuberosum HOM05D005690 ORTHO05D007075 1.8e-77 293.1 193 74.1
TAR633G2147 Trochodendron aralioides HOM05D005690 ORTHO05D007075 1.8e-77 293.1 206 72.3
MBI05_g11579_MAGBIO Magnolia biondii HOM05D005690 ORTHO05D007075 3.1e-77 292.4 234 65.8
HanXRQChr09g0246501 Helianthus annuus HOM05D005690 ORTHO05D007075 4.1e-77 292.0 194 74.7
Eucgr.J01111 Eucalyptus grandis HOM05D005690 ORTHO05D007075 7.0e-77 291.2 210 68.1
CANSAT56G3535 Cannabis sativa HOM05D005690 ORTHO05D007075 9.1e-77 290.8 218 68.3
Nitab4.5_0000476g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 9.1e-77 290.8 188 77.1
QL08p056659 Quercus lobata HOM05D005690 ORTHO05D007075 9.1e-77 290.8 223 68.2
COL.COLO4_32034 Corchorus olitorius HOM05D005690 ORTHO05D007075 1.2e-76 290.4 203 74.4
Ca_04676_v3 Cicer arietinum L. HOM05D005690 ORTHO05D007075 1.6e-76 290.0 196 74.0
FAN01G0973 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.6e-76 290.0 221 67.9
RcHm_v2.0_Chr1g0363981 Rosa chinensis HOM05D005690 ORTHO05D007075 1.6e-76 290.0 224 67.0
Atru.chr12.670 Acer truncatum HOM05D005690 ORTHO05D007075 2.0e-76 289.7 218 67.9
CAN.G694.84 Capsicum annuum HOM05D005690 ORTHO05D007075 2.0e-76 289.7 193 74.6
Cpa.g.sc53.43 Carica papaya HOM05D005690 ORTHO05D007075 2.0e-76 289.7 212 68.4
Cc02_g11390 Coffea canephora HOM05D005690 ORTHO05D007075 2.0e-76 289.7 209 70.8
FAN10G0816 Fragaria x ananassa HOM05D005690 ORTHO05D007075 2.0e-76 289.7 221 67.9
Lj2g0014971 Lotus japonicus HOM05D005690 ORTHO05D007075 2.0e-76 289.7 229 65.9
HanXRQChr17g0563371 Helianthus annuus HOM05D005690 ORTHO05D007075 2.7e-76 289.3 189 75.7
VMungo0464G0948 Vigna mungo HOM05D005690 ORTHO05D007075 4.5e-76 288.5 219 68.0
Atru.chr12.697 Acer truncatum HOM05D005690 ORTHO05D007075 5.9e-76 288.1 220 67.3
MSTRG.373 Avicennia marina HOM05D005690 ORTHO05D007075 5.9e-76 288.1 198 72.7
Nitab4.5_0012288g0020 Nicotiana tabacum HOM05D005690 ORTHO05D007075 5.9e-76 288.1 188 75.5
ECA232G2854 Erigeron canadensis HOM05D005690 ORTHO05D007075 7.7e-76 287.7 208 69.7
Nitab4.5_0009003g0010 Nicotiana tabacum HOM05D005690 ORTHO05D007075 1.3e-75 287.0 183 77.0
Rhsim09G0153300 Rhododendron simsii HOM05D005690 ORTHO05D007075 1.3e-75 287.0 223 66.4
Medtr6g033405 Medicago truncatula HOM05D005690 ORTHO05D007075 1.7e-75 286.6 205 70.2
Glyma.17G183500 Glycine max HOM05D005690 ORTHO05D007075 2.2e-75 286.2 219 67.1
TPR.G36634 Trifolium pratense HOM05D005690 ORTHO05D007075 2.2e-75 286.2 201 72.6
PSO339G2382 Papaver somniferum HOM05D005690 ORTHO05D007075 2.9e-75 285.8 206 71.4
arahy.Tifrunner.gnm1.ann1.08HL34 Arachis hypogaea HOM05D005690 ORTHO05D007075 5.0e-75 285.0 201 71.1
PSO384G2564 Papaver somniferum HOM05D005690 ORTHO05D007075 5.0e-75 285.0 206 71.8
Phvul.004G075000 Phaseolus vulgaris HOM05D005690 ORTHO05D007075 5.0e-75 285.0 219 66.2
PGR044G2452 Punica granatum HOM05D005690 ORTHO05D007075 5.0e-75 285.0 200 71.5
arahy.Tifrunner.gnm1.ann1.8E9GH8 Arachis hypogaea HOM05D005690 ORTHO05D007075 6.5e-75 284.6 200 71.0
Hma1.2p1_2080F.1_g313490 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 6.5e-75 284.6 197 72.1
Hma1.2p1_0453F.1_g156020 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 1.1e-74 283.9 221 65.6
Sed0011214 Sechium edule HOM05D005690 ORTHO05D007075 1.1e-74 283.9 195 75.9
Lsat_1_v5_gn_9_67140 Lactuca sativa HOM05D005690 ORTHO05D007075 1.5e-74 283.5 190 74.7
CsaV3_5G025890 Cucumis sativus L. HOM05D005690 ORTHO05D007075 1.9e-74 283.1 218 69.7
MELO3C002879.2 Cucumis melo HOM05D005690 ORTHO05D007075 1.6e-73 280.0 218 68.8
vmacro04884 Vaccinium macrocarpon HOM05D005690 ORTHO05D007075 8.0e-73 277.7 225 63.1
Aa31LG9G7550 Aethionema arabicum HOM05D005690 ORTHO05D007075 4.0e-72 275.4 233 62.7
AT2G35790 Arabidopsis thaliana HOM05D005690 ORTHO05D007075 4.0e-72 275.4 221 65.2
THA.LOC104802837 Tarenaya hassleriana HOM05D005690 ORTHO05D007075 5.2e-72 275.0 195 70.3
Peaxi162Scf01175g00023 Petunia axillaris HOM05D005690 ORTHO05D007075 1.2e-71 273.9 183 74.3
CARHR130040 Cardamine hirsuta HOM05D005690 ORTHO05D007075 1.5e-71 273.5 216 65.3
CDE04G0636 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 5.7e-71 271.6 196 68.9
AL4G31900 Arabidopsis lyrata HOM05D005690 ORTHO05D007075 7.5e-71 271.2 234 62.0
Carub.0004s1755 Capsella rubella HOM05D005690 ORTHO05D007075 9.8e-71 270.8 216 64.8
Migut.F01989 Erythranthe guttata HOM05D005690 ORTHO05D007075 9.8e-71 270.8 213 70.0
Sed0019941 Sechium edule HOM05D005690 ORTHO05D007075 1.3e-70 270.4 213 68.1
Aqoxy6G02013 Aquilegia oxysepala HOM05D005690 ORTHO05D007075 4.8e-70 268.5 189 71.4
Zm00001eb064810 Zea mays HOM05D005690 ORTHO05D007075 8.3e-70 267.7 190 70.5
Rhsim03G0123000 Rhododendron simsii HOM05D005690 ORTHO05D007075 1.4e-69 266.9 219 63.5
SalBow4G1295 Salvia bowleyana HOM05D005690 ORTHO05D007075 2.4e-69 266.2 176 73.3
SGA_v2.0_scaffold28G12052 Striga asiatica HOM05D005690 ORTHO05D007075 3.1e-69 265.8 177 74.0
ATR1159G074 Amborella trichopoda HOM05D005690 ORTHO05D007075 7.0e-69 264.6 237 61.6
unitig_0.g529 Utricularia gibba HOM05D005690 ORTHO05D007075 1.2e-68 263.8 188 69.1
BcaC01g05707 Brassica carinata HOM05D005690 ORTHO05D007075 2.7e-68 262.7 191 69.1
C03p22980 Brassica napus HOM05D005690 ORTHO05D007075 2.7e-68 262.7 191 69.1
HPP92_003607 Vanilla planifolia HOM05D005690 ORTHO05D007075 5.9e-68 261.5 201 65.2
BcaB06g28872 Brassica carinata HOM05D005690 ORTHO05D007075 1.0e-67 260.8 195 67.7
A03p19730 Brassica napus HOM05D005690 ORTHO05D007075 2.3e-67 259.6 191 68.1
Thhalv10017166m.g Eutrema salsugineum HOM05D005690 ORTHO05D007075 2.3e-67 259.6 192 67.7
Sp4g18050 Schrenkiella parvula HOM05D005690 ORTHO05D007075 2.3e-67 259.6 226 60.6
A04p27260 Brassica napus HOM05D005690 ORTHO05D007075 2.9e-67 259.2 192 68.2
Os03g0853800 Oryza sativa ssp. japonica HOM05D005690 ORTHO05D007075 1.1e-66 257.3 161 78.3
BraA04t18224Z Brassica rapa HOM05D005690 ORTHO05D007075 1.9e-66 256.5 192 67.7
BcaC02g07668 Brassica carinata HOM05D005690 ORTHO05D007075 5.5e-66 255.0 191 68.6
BolC4t27955H Brassica oleracea HOM05D005690 ORTHO05D007075 5.5e-66 255.0 191 67.5
C04p64770 Brassica napus HOM05D005690 ORTHO05D007075 1.2e-65 253.8 191 68.1
SalBow3G1299 Salvia bowleyana HOM05D005690 ORTHO05D007075 8.0e-65 251.1 202 62.9
CDE07G1130 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 1.0e-64 250.8 160 76.2
BcaB01g03881 Brassica carinata HOM05D005690 ORTHO05D007075 1.8e-64 250.0 152 77.6
ClCG09G020510 Citrullus lanatus HOM05D005690 ORTHO05D007075 1.8e-64 250.0 193 67.4
SEGI_15078 Sequoiadendron giganteum HOM05D005690 ORTHO05D007075 4.5e-60 235.3 190 62.1
Eucgr.J01110 Eucalyptus grandis HOM05D005690 ORTHO05D007075 5.0e-59 231.9 213 55.9
CSS0000246 Camellia sinensis var. sinensis HOM05D005690 ORTHO05D007075 3.3e-58 229.2 182 64.3
Sc06g0001780 Simmondsia chinensis HOM05D005690 ORTHO05D007075 9.8e-55 217.6 120 85.8
Peaxi162Scf00108g00173 Petunia axillaris HOM05D005690 ORTHO05D007075 6.2e-49 198.4 121 78.5
Lj8C97T4 Lonicera japonica HOM05D005690 ORTHO05D007075 3.4e-47 192.6 121 76.0
Nitab4.5_0003072g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 4.1e-45 185.7 187 53.5
CiPaw.01G275500 Carya illinoinensis HOM05D005690 ORTHO05D007075 3.5e-44 182.6 188 54.3
AagrBONN_evm.TU.Sc2ySwM_362.1612 Anthoceros agrestis HOM05D005690 ORTHO05D007075 1.5e-42 177.2 142 57.0
BcaB01g03882 Brassica carinata HOM05D005690 ORTHO05D007075 4.3e-42 175.6 111 71.2
Psat1g099440 Pisum sativum HOM05D005690 ORTHO05D007075 4.3e-42 175.6 162 58.0
Mapoly0033s0041 Marchantia polymorpha HOM05D005690 ORTHO05D007075 1.6e-41 173.7 197 42.6
Pp3c10_15170 Physcomitrium patens HOM05D005690 ORTHO05D007075 6.8e-40 168.3 175 47.4
Mapoly0033s0042 Marchantia polymorpha HOM05D005690 ORTHO05D007075 1.9e-34 150.2 157 44.6
Psat2g052960 Pisum sativum HOM05D004553 ORTHO05D005426 8.9e-32 141.4 174 44.8
SMO239G0063 Selaginella moellendorffii HOM05D005690 ORTHO05D007075 6.2e-25 118.6 176 35.8
Lalb_Chr01g0010161 Lupinus albus HOM05D005690 ORTHO05D007075 2.9e-22 109.8 68 75.0
CDE07G0610 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 2.6e-15 86.7 123 45.5
Cre12.g540051 Chlamydomonas reinhardtii HOM05D005690 ORTHO05D007075 1.3e-14 84.3 149 30.2
Lalb_Chr01g0010151 Lupinus albus HOM05D005690 ORTHO05D007075 5.4e-13 79.0 92 53.3
MCO03G451 Micromonas commoda HOM05D005690 ORTHO05D007075 2.1e-12 77.0 197 31.0
Nn2g10688 Nelumbo nucifera HOM05D005690 ORTHO05D007075 1.0e-06 58.2 65 49.2


User provided reference genes

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