Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 5.2e-204 714.1 355 100.0
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 1.3e-130 470.3 307 77.2
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 2.6e-123 446.0 344 68.6
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 6.5e-98 361.7 344 55.2
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 8.5e-98 361.3 339 54.9
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 1.4e-97 360.5 337 55.2
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 9.4e-97 357.8 335 56.4
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 3.6e-96 355.9 339 55.5
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 3.6e-96 355.9 333 56.5
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 1.4e-95 354.0 347 54.2
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 1.4e-95 354.0 349 56.7
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 2.3e-95 353.2 334 55.1
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 3.9e-95 352.4 336 53.9
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 6.7e-95 351.7 337 55.2
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 1.1e-94 350.9 336 54.2
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 1.5e-94 350.5 344 53.8
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 2.0e-94 350.1 357 54.6
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 2.6e-94 349.7 335 54.0
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 4.4e-94 349.0 354 51.7
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 4.4e-94 349.0 340 55.0
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 7.4e-94 348.2 340 55.0
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 7.4e-94 348.2 337 53.7
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 1.3e-93 347.4 337 54.6
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 1.7e-93 347.1 340 55.0
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 2.2e-93 346.7 341 53.7
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 4.8e-93 345.5 337 54.0
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 6.3e-93 345.1 340 54.4
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 8.2e-93 344.7 336 54.8
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 5.3e-92 342.0 336 54.5
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 9.1e-92 341.3 336 54.2
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 2.0e-91 340.1 333 53.8
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 5.9e-91 338.6 339 53.7
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 5.9e-91 338.6 338 52.1
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 1.3e-90 337.4 339 52.2
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 6.5e-90 335.1 334 54.5
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 1.5e-89 334.0 337 51.9
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 1.5e-89 334.0 339 51.9
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 1.9e-89 333.6 337 51.9
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 4.2e-89 332.4 338 50.9
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 1.2e-88 330.9 335 52.2
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 1.6e-88 330.5 340 52.4
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 2.1e-88 330.1 339 52.2
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 8.0e-88 328.2 338 51.2
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 1.8e-87 327.0 338 50.3
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 3.0e-87 326.2 303 57.1
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 6.7e-87 325.1 339 51.3
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 8.8e-87 324.7 336 50.0
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 1.5e-86 323.9 337 50.4
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 1.5e-86 323.9 337 50.7
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 2.6e-86 323.2 340 50.9
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 5.7e-86 322.0 335 51.0
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 9.7e-86 321.2 346 50.9
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 1.3e-85 320.9 338 50.3
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 8.2e-85 318.2 309 54.4
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 2.4e-84 316.6 337 51.3
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 7.0e-84 315.1 337 49.9
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 1.0e-82 311.2 340 51.2
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 2.9e-82 309.7 336 47.3
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 3.8e-82 309.3 337 48.1
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 8.5e-82 308.1 304 53.3
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 4.2e-81 305.8 339 47.8
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 1.2e-80 304.3 333 48.6
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 3.0e-79 299.7 338 47.3
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 4.0e-79 299.3 332 48.8
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.3e-77 294.3 290 54.1
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 7.0e-76 288.5 338 49.1
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 2.7e-75 286.6 290 52.8
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 2.7e-75 286.6 343 45.8
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 2.9e-74 283.1 335 49.3
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 6.1e-72 275.4 249 56.2
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 8.0e-72 275.0 277 52.7
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 8.0e-72 275.0 282 52.8
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 2.3e-71 273.5 341 47.8
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 2.3e-71 273.5 340 47.9
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 3.0e-71 273.1 338 49.1
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 3.0e-71 273.1 338 49.1
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 3.0e-71 273.1 338 48.8
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 5.2e-71 272.3 338 48.2
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 2.6e-70 270.0 342 47.4
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 5.7e-70 268.9 335 46.9
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 7.5e-70 268.5 277 51.6
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 9.8e-70 268.1 357 45.1
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 1.3e-69 267.7 338 48.2
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 2.8e-69 266.5 281 52.7
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 3.7e-69 266.2 248 55.6
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 4.8e-69 265.8 342 47.1
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 8.3e-69 265.0 339 45.7
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 1.8e-68 263.8 338 47.6
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 2.0e-67 260.4 274 52.9
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 7.7e-67 258.5 245 56.7
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 9.8e-62 241.5 301 44.5
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 2.4e-60 236.9 295 47.5
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 3.2e-60 236.5 226 53.5
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 1.6e-59 234.2 338 42.9
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 1.7e-53 214.2 276 48.2
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 1.6e-51 207.6 191 56.5
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 1.4e-47 194.5 338 38.2
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 2.9e-45 186.8 147 65.3
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 5.4e-44 182.6 211 46.4
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 7.8e-43 178.7 351 35.3
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 3.9e-42 176.4 336 37.2
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 3.7e-37 159.8 296 38.2
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 4.1e-36 156.4 255 42.0
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 3.3e-33 146.7 331 33.8
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 2.0e-30 137.5 217 42.9
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 5.8e-30 136.0 222 37.8
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 7.1e-28 129.0 156 44.2
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 5.6e-25 119.4 114 57.0
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 1.8e-23 114.4 198 38.9
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 6.0e-19 99.4 63 69.8
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 1.7e-18 97.8 360 26.4
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 6.6e-18 95.9 237 35.0
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 1.5e-17 94.7 68 63.2
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 3.3e-17 93.6 72 55.6
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 4.8e-16 89.7 62 58.1
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 2.4e-15 87.4 90 47.8
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 5.5e-12 76.3 191 31.4
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 2.1e-11 74.3 338 27.2
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 6.7e-10 69.3 69 49.3
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 3.3e-09 67.0 145 34.5
CSS0028355 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 7.6e-06 55.8 50 58.0
HPP92_019693 Vanilla planifolia HOM05D005940 ORTHO05D002769 7.6e-06 55.8 61 49.2


User provided reference genes

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