Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03408 Beta vulgaris HOM05D000023 ORTHO05D000014 8.5e-93 343.6 164 100.0
EL10Ac8g20203 Beta vulgaris HOM05D000023 ORTHO05D000014 1.5e-44 183.3 96 92.7
Solyc09g047860.1 Solanum lycopersicum HOM05D000023 ORTHO05D000014 1.1e-36 157.1 193 40.4
Rhsim05G0106100 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.1e-26 124.0 117 51.3
Oeu039770.2 Olea europaea HOM05D000023 ORTHO05D000014 3.1e-26 122.5 107 52.3
EL10Ac1g02127 Beta vulgaris HOM05D000023 ORTHO05D000014 3.7e-24 115.5 127 46.5
Solyc12g070140.1 Solanum lycopersicum HOM05D000023 ORTHO05D000014 1.1e-23 114.0 116 46.6
Hma1.2p1_0174F.1_g076780 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.4e-23 113.6 108 51.9
EL10Ac6g14082 Beta vulgaris HOM05D000023 ORTHO05D000014 1.6e-22 110.2 134 43.3
Solyc03g078070.3 Solanum lycopersicum HOM05D000023 ORTHO05D000014 8.1e-19 97.8 91 50.5
AUR62038469 Chenopodium quinoa HOM05D000023 ORTHO05D000014 8.9e-18 94.4 283 28.3
PSO017G7398 Papaver somniferum HOM05D000023 ORTHO05D000014 1.1e-10 70.9 124 33.9
PSO675G8761 Papaver somniferum HOM05D000023 ORTHO05D000014 1.4e-10 70.5 124 33.9
Rhsim02G0187800 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.4e-10 70.5 69 44.9
Os02g0513700 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 5.2e-10 68.6 136 32.4
Os06g0658400 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 9.0e-10 67.8 136 32.4
TWI18G0892 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 9.0e-10 67.8 75 50.7
Dinv09736 Davidia involucrata HOM05D000023 ORTHO05D017897 2.0e-09 66.6 73 41.1
TWI63G0054 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.6e-09 66.2 75 49.3
TWI77G0100 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.6e-09 66.2 136 39.0
QL04p040428 Quercus lobata HOM05D001491 ORTHO05D000014 5.8e-09 65.1 146 32.2
QL02p052017 Quercus lobata HOM05D000023 ORTHO05D000014 7.6e-09 64.7 79 39.2
QL11p051169 Quercus lobata HOM05D000023 ORTHO05D000014 7.6e-09 64.7 79 39.2
TWI77G0487 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 7.6e-09 64.7 90 37.8
CSS0032611 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 9.9e-09 64.3 45 60.0
Oeu013352.1 Olea europaea HOM05D000023 ORTHO05D000014 1.3e-08 63.9 50 52.0
CSS0048742 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.7e-08 63.5 45 57.8
Dinv11853 Davidia involucrata HOM05D000023 ORTHO05D000014 1.7e-08 63.5 73 42.5
QL02p079277 Quercus lobata HOM05D000023 ORTHO05D000014 1.7e-08 63.5 79 39.2
QL04p042141 Quercus lobata HOM05D000023 ORTHO05D000014 1.7e-08 63.5 79 39.2
QL05p053353 Quercus lobata HOM05D000023 ORTHO05D000014 1.7e-08 63.5 79 39.2
QL06p001114 Quercus lobata HOM05D000023 ORTHO05D000014 1.7e-08 63.5 79 39.2
QL06p025366 Quercus lobata HOM05D000023 ORTHO05D000014 1.7e-08 63.5 79 39.2
QL10p053741 Quercus lobata HOM05D000023 ORTHO05D000014 1.7e-08 63.5 79 39.2
QL11p043807 Quercus lobata HOM05D000023 ORTHO05D000014 1.7e-08 63.5 79 39.2
FvH4_5g23531 Fragaria vesca HOM05D000023 ORTHO05D000014 2.2e-08 63.2 112 33.9
CSS0011123 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.8e-08 62.4 51 56.9
Zm00001eb410340 Zea mays HOM05D000023 ORTHO05D000014 4.9e-08 62.0 133 34.6
arahy.Tifrunner.gnm1.ann1.59J3RY Arachis hypogaea HOM05D000023 ORTHO05D000014 1.4e-07 60.5 127 35.4
Oeu034997.1 Olea europaea HOM05D000023 ORTHO05D000014 1.4e-07 60.5 50 52.0
SEGI_36132 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.9e-07 60.1 99 36.4
CSS0010773 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.4e-07 59.7 51 54.9
AUR62010569 Chenopodium quinoa HOM05D001983 ORTHO05D001935 2.4e-07 59.7 74 39.2
AUR62044629 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.4e-07 59.7 74 39.2
AUR62044734 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.4e-07 59.7 74 39.2
TWI39G1161 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.4e-07 59.7 75 42.7
PSO339G2310 Papaver somniferum HOM05D000023 ORTHO05D000014 3.2e-07 59.3 93 37.6
COL.COLO4_20882 Corchorus olitorius HOM05D000023 ORTHO05D000014 5.4e-07 58.5 71 36.6
Gohir.D08G105850 Gossypium hirsutum HOM05D000023 ORTHO05D000014 5.4e-07 58.5 50 56.0
Gorai.004G113200 Gossypium raimondii HOM05D000023 ORTHO05D000014 5.4e-07 58.5 50 56.0
PSO063G2055 Papaver somniferum HOM05D000023 ORTHO05D000014 5.4e-07 58.5 71 42.3
QL06p009534 Quercus lobata HOM05D000132 ORTHO05D000014 5.4e-07 58.5 110 31.8
PSO017G0124 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-07 57.8 71 42.3
PSO017G0971 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-07 57.8 71 42.3
PSO063G2876 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-07 57.8 71 42.3
PSO063G3226 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-07 57.8 71 42.3
PSO063G4346 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-07 57.8 71 42.3
PSO170G3895 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-07 57.8 71 42.3
PSO478G1709 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-07 57.8 71 42.3
PSO675G2708 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-07 57.8 71 42.3
PSO675G6543 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-07 57.8 71 42.3
PSO782G3350 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-07 57.8 71 42.3
FvH4_2g16371 Fragaria vesca HOM05D000023 ORTHO05D000014 1.2e-06 57.4 128 31.2
Oeu046565.3 Olea europaea HOM05D000023 ORTHO05D000014 1.2e-06 57.4 45 51.1
PSO357G0123 Papaver somniferum HOM05D000023 ORTHO05D000014 1.2e-06 57.4 93 36.6
PGSC0003DMG400017468 Solanum tuberosum HOM05D000023 ORTHO05D000014 1.2e-06 57.4 53 45.3
Manes.12G053502 Manihot esculenta HOM05D000023 ORTHO05D000014 1.6e-06 57.0 40 60.0
AUR62022925 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.1e-06 56.6 77 36.4
Lj5g0002668 Lotus japonicus HOM05D000023 ORTHO05D000014 2.1e-06 56.6 109 36.7
PSO384G2567 Papaver somniferum HOM05D000023 ORTHO05D000014 2.1e-06 56.6 71 42.3
QL01p016263 Quercus lobata HOM05D000023 ORTHO05D000014 2.1e-06 56.6 77 42.9
SHI27557 Sapria himalayana HOM05D000023 ORTHO05D000014 2.1e-06 56.6 96 34.4
vmacro19048 Vaccinium macrocarpon HOM05D000555 ORTHO05D000646 2.1e-06 56.6 103 35.9
AUR62010486 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.7e-06 56.2 77 36.4
AUR62019364 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.7e-06 56.2 77 36.4
AUR62024763 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.7e-06 56.2 77 36.4
AUR62030082 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.7e-06 56.2 77 36.4
AUR62032748 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.7e-06 56.2 77 36.4
AUR62035857 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.7e-06 56.2 77 36.4
Rhsim02G0150800 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.7e-06 56.2 115 31.3
Sopen02g004200 Solanum pennellii HOM05D000023 ORTHO05D000014 2.7e-06 56.2 53 43.4
Sopen08g006480 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-06 56.2 53 43.4
Sopen10g016210 Solanum pennellii HOM05D000023 ORTHO05D000014 2.7e-06 56.2 53 43.4
TPR.G39219 Trifolium pratense HOM05D001557 ORTHO05D001299 2.7e-06 56.2 68 38.2
AUR62011831 Chenopodium quinoa HOM05D000023 ORTHO05D000014 3.5e-06 55.8 77 36.4
PSO063G7474 Papaver somniferum HOM05D000023 ORTHO05D000014 3.5e-06 55.8 122 33.6
SHI13583 Sapria himalayana HOM05D000023 ORTHO05D000014 3.5e-06 55.8 56 44.6
Hund07711 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.5e-06 55.8 84 34.5
Sopen05g009340 Solanum pennellii HOM05D000023 ORTHO05D000014 3.5e-06 55.8 53 43.4
Hund07498 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.6e-06 55.5 123 32.5
SEGI_24184 Sequoiadendron giganteum HOM05D003169 ORTHO05D000014 4.6e-06 55.5 53 50.9
AUR62005034 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.0e-06 55.1 77 36.4
AUR62012446 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.0e-06 55.1 77 36.4
AUR62016849 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.0e-06 55.1 77 36.4
AUR62017341 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.0e-06 55.1 77 36.4
AUR62022259 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.0e-06 55.1 77 36.4
AUR62033875 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.0e-06 55.1 77 36.4
AUR62035427 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.0e-06 55.1 77 36.4
AUR62039095 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.0e-06 55.1 77 36.4
AUR62041775 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.0e-06 55.1 77 36.4
AUR62042701 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.0e-06 55.1 77 36.4
Medtr4g130640 Medicago truncatula HOM05D013837 ORTHO05D000014 6.0e-06 55.1 57 43.9
Atru.chr5.1256 Acer truncatum HOM05D000023 ORTHO05D000014 7.8e-06 54.7 75 40.0
FAN05G3912 Fragaria x ananassa HOM05D000855 ORTHO05D017897 7.8e-06 54.7 73 37.0
Hund00797 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.8e-06 54.7 118 29.7
TWI73G0533 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 7.8e-06 54.7 61 39.3


User provided reference genes

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