Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 1.7e-199 699.1 355 100.0
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 8.4e-130 467.6 355 69.6
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 4.0e-116 422.2 353 62.9
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 9.3e-113 411.0 390 57.9
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 6.9e-108 394.8 360 58.6
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 3.8e-106 389.0 359 58.2
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 3.6e-104 382.5 358 56.4
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 3.9e-103 379.0 360 57.2
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 1.1e-102 377.5 358 55.9
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 1.3e-101 374.0 361 55.1
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 4.8e-101 372.1 360 55.3
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 4.1e-100 369.0 359 55.4
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 6.9e-100 368.2 360 55.6
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 1.5e-99 367.1 358 55.0
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 6.5e-98 361.7 360 54.7
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 9.4e-97 357.8 358 54.2
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 1.2e-96 357.5 358 54.7
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 1.2e-96 357.5 360 53.1
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 7.9e-96 354.8 358 52.0
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 7.9e-96 354.8 361 53.2
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 7.9e-96 354.8 361 52.9
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 1.4e-95 354.0 371 53.4
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 1.4e-95 354.0 361 52.9
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 3.9e-95 352.4 360 53.9
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 8.8e-95 351.3 360 51.9
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 2.0e-94 350.1 360 51.9
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 7.4e-94 348.2 358 52.0
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 2.2e-93 346.7 360 53.3
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 3.7e-93 345.9 360 53.3
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 6.3e-93 345.1 358 51.4
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 8.2e-93 344.7 360 52.8
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 1.4e-92 344.0 360 52.8
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 2.4e-92 343.2 358 50.8
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 5.3e-92 342.0 358 50.6
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 9.1e-92 341.3 353 50.7
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 2.6e-91 339.7 360 50.8
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 5.9e-91 338.6 360 50.6
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 5.9e-91 338.6 357 51.3
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 7.7e-91 338.2 360 50.6
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 3.8e-90 335.9 361 51.5
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 3.8e-90 335.9 361 51.5
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 3.8e-90 335.9 360 50.6
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 1.1e-89 334.3 358 51.1
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.1e-89 334.3 360 50.0
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 1.9e-89 333.6 360 50.8
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 1.9e-89 333.6 360 50.0
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 5.5e-89 332.0 356 52.5
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 7.2e-89 331.6 358 50.8
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 1.2e-88 330.9 360 51.7
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 2.1e-88 330.1 358 50.0
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 3.6e-88 329.3 404 48.5
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 1.5e-86 323.9 360 48.9
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 2.0e-86 323.6 356 51.1
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 5.7e-86 322.0 360 47.8
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 1.3e-85 320.9 358 48.0
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 1.7e-85 320.5 356 49.2
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.7e-85 320.5 360 49.2
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 2.2e-85 320.1 360 49.7
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 4.8e-85 318.9 362 49.2
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 4.8e-85 318.9 359 50.1
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 4.1e-84 315.8 480 40.8
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 7.0e-84 315.1 358 48.6
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 5.9e-83 312.0 357 49.0
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 1.0e-82 311.2 405 45.7
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 1.7e-82 310.5 360 45.8
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 2.9e-82 309.7 324 52.5
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 1.9e-81 307.0 360 46.1
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 8.8e-79 298.1 261 61.7
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 4.4e-78 295.8 357 44.8
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 3.7e-77 292.7 253 60.5
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 3.1e-76 289.7 345 46.1
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 5.3e-76 288.9 357 44.0
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 2.7e-75 286.6 278 52.9
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 7.7e-75 285.0 362 44.2
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 1.0e-74 284.6 357 43.4
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 1.0e-74 284.6 357 43.4
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 1.3e-74 284.3 357 44.0
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 6.5e-74 282.0 354 44.9
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 1.1e-73 281.2 355 44.5
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 7.2e-73 278.5 275 52.7
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.6e-72 277.3 281 55.2
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 3.6e-72 276.2 281 54.8
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 2.6e-70 270.0 357 42.0
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 2.6e-70 270.0 357 40.9
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 4.4e-70 269.2 357 41.7
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 4.4e-70 269.2 349 45.8
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 4.4e-70 269.2 357 44.5
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 1.3e-69 267.7 342 43.6
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 4.8e-69 265.8 361 43.2
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 1.4e-68 264.2 357 41.2
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 1.8e-68 263.8 342 42.1
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 9.1e-68 261.5 256 56.6
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 5.9e-67 258.8 359 41.2
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 3.0e-63 246.5 251 52.2
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 1.7e-61 240.7 355 42.0
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 4.1e-60 236.1 234 56.4
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 1.3e-58 231.1 263 49.8
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 4.3e-57 226.1 355 37.7
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 7.5e-54 215.3 214 52.8
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 2.0e-51 207.2 343 36.2
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 1.3e-50 204.5 252 44.0
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 4.7e-48 196.1 113 86.7
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 2.3e-47 193.7 262 43.9
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 2.1e-43 180.6 153 63.4
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 3.2e-36 156.8 346 29.5
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 2.4e-23 114.0 76 71.1
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 6.9e-23 112.5 263 27.0
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 9.0e-23 112.1 76 69.7
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 8.4e-21 105.5 70 70.0
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 2.4e-20 104.0 68 67.6
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 6.6e-18 95.9 63 63.5
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 4.0e-07 60.1 63 42.9


User provided reference genes

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