Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03378 Beta vulgaris HOM05D005889 ORTHO05D007495 1.3e-36 156.0 84 100.0
AUR62032095 Chenopodium quinoa HOM05D005889 ORTHO05D007495 6.8e-30 133.7 83 86.7
Ah.16g106950 Amaranthus hybridus HOM05D005889 ORTHO05D007495 1.5e-29 132.5 83 85.5
CANSAT64G0610 Cannabis sativa HOM05D005889 ORTHO05D007495 6.0e-26 120.6 83 74.7
CANSAT64G2621 Cannabis sativa HOM05D005889 ORTHO05D007495 6.0e-26 120.6 83 74.7
MELO3C009927.2 Cucumis melo HOM05D005889 ORTHO05D007495 2.3e-25 118.6 77 76.6
QL02p077702 Quercus lobata HOM05D005889 ORTHO05D007495 2.3e-25 118.6 77 76.6
Sed0023571 Sechium edule HOM05D005889 ORTHO05D007495 2.3e-25 118.6 77 76.6
Manes.17G118700 Manihot esculenta HOM05D005889 ORTHO05D007495 3.0e-25 118.2 77 77.9
GSVIVG01032527001 Vitis vinifera HOM05D005889 ORTHO05D007495 3.9e-25 117.9 80 73.8
CsaV3_3G042070 Cucumis sativus L. HOM05D005889 ORTHO05D007495 5.0e-25 117.5 77 77.9
MBI14_g42400_MAGBIO Magnolia biondii HOM05D005889 ORTHO05D007495 5.0e-25 117.5 76 78.9
Sc20g0002790 Simmondsia chinensis HOM05D005889 ORTHO05D007495 5.0e-25 117.5 79 74.7
MSTRG.15501 Avicennia marina HOM05D005889 ORTHO05D007495 6.6e-25 117.1 77 76.6
BcaNung05888 Brassica carinata HOM05D005889 ORTHO05D007495 6.6e-25 117.1 77 74.0
C02p07380 Brassica napus HOM05D005889 ORTHO05D007495 6.6e-25 117.1 77 74.0
BolC2t06669H Brassica oleracea HOM05D005889 ORTHO05D007495 6.6e-25 117.1 77 74.0
MD17G1039100 Malus domestica HOM05D005889 ORTHO05D007495 6.6e-25 117.1 83 71.1
BcaB01g05094 Brassica carinata HOM05D005889 ORTHO05D007495 8.6e-25 116.7 77 74.0
A03p06840 Brassica napus HOM05D005889 ORTHO05D007495 8.6e-25 116.7 77 74.0
C03p07840 Brassica napus HOM05D005889 ORTHO05D007495 8.6e-25 116.7 77 74.0
BolC3t13283H Brassica oleracea HOM05D005889 ORTHO05D007495 8.6e-25 116.7 77 74.0
BraA03t10009Z Brassica rapa HOM05D005889 ORTHO05D007495 8.6e-25 116.7 77 74.0
Carub.0006s1306 Capsella rubella HOM05D005889 ORTHO05D007495 8.6e-25 116.7 77 74.0
CARHR198430 Cardamine hirsuta HOM05D005889 ORTHO05D007495 8.6e-25 116.7 77 74.0
Nitab4.5_0005206g0020 Nicotiana tabacum HOM05D005889 ORTHO05D007495 8.6e-25 116.7 76 76.3
Prupe.3G279900 Prunus persica HOM05D005889 ORTHO05D007495 8.6e-25 116.7 77 75.3
Sp6g29140 Schrenkiella parvula HOM05D005889 ORTHO05D007495 8.6e-25 116.7 77 74.0
Cfa007463 Carpinus fangiana HOM05D001690 ORTHO05D002627 1.1e-24 116.3 77 75.3
CiPaw.03G035200 Carya illinoinensis HOM05D005889 ORTHO05D007495 1.1e-24 116.3 77 75.3
DCAR_011198 Daucus carota HOM05D005889 ORTHO05D007495 1.1e-24 116.3 77 76.6
Thhalv10014795m.g Eutrema salsugineum HOM05D005889 ORTHO05D007495 1.1e-24 116.3 77 74.0
MBI14_g19739_MAGBIO Magnolia biondii HOM05D005889 ORTHO05D007495 1.1e-24 116.3 77 77.9
Nitab4.5_0001952g0130 Nicotiana tabacum HOM05D005889 ORTHO05D007495 1.5e-24 115.9 77 74.0
BcaNung03088 Brassica carinata HOM05D005889 ORTHO05D007495 1.9e-24 115.5 77 72.7
CSS0022009 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 1.9e-24 115.5 80 71.2
A02p02770 Brassica napus HOM05D005889 ORTHO05D007495 2.5e-24 115.2 77 71.4
BraA02t05248Z Brassica rapa HOM05D005889 ORTHO05D007495 2.5e-24 115.2 77 71.4
Rhsim10G0026400 Rhododendron simsii HOM05D005889 ORTHO05D007495 2.5e-24 115.2 77 74.0
Rhsim10G0026900 Rhododendron simsii HOM05D005889 ORTHO05D007495 2.5e-24 115.2 77 74.0
Sopen02g031900 Solanum pennellii HOM05D005889 ORTHO05D007495 2.5e-24 115.2 77 74.0
PGSC0003DMG400000508 Solanum tuberosum HOM05D005889 ORTHO05D007495 2.5e-24 115.2 77 74.0
Eucgr.J02175 Eucalyptus grandis HOM05D005889 ORTHO05D007495 3.3e-24 114.8 77 77.9
Glyma.13G070100 Glycine max HOM05D005889 ORTHO05D007495 3.3e-24 114.8 80 71.2
Phvul.004G019800 Phaseolus vulgaris HOM05D005889 ORTHO05D007495 3.3e-24 114.8 80 72.5
Glyma.19G012900 Glycine max HOM05D005889 ORTHO05D007495 5.6e-24 114.0 80 71.2
Hma1.2p1_0697F.1_g204970 Hydrangea macrophylla HOM05D005889 ORTHO05D007495 5.6e-24 114.0 76 76.3
Sabra16G0230000 Salix brachista HOM05D005889 ORTHO05D007495 5.6e-24 114.0 77 74.0
Solyc02g087150.3 Solanum lycopersicum HOM05D005889 ORTHO05D007495 5.6e-24 114.0 77 72.7
THA.LOC104821069 Tarenaya hassleriana HOM05D005889 ORTHO05D007495 5.6e-24 114.0 77 72.7
VMungo0464G2061 Vigna mungo HOM05D001690 ORTHO05D002627 5.6e-24 114.0 80 71.2
AT5G14910 Arabidopsis thaliana HOM05D005889 ORTHO05D007495 7.3e-24 113.6 77 71.4
Migut.K01361 Erythranthe guttata HOM05D005889 ORTHO05D007495 7.3e-24 113.6 77 72.7
Manes.15G180360 Manihot esculenta HOM05D005889 ORTHO05D007495 7.3e-24 113.6 77 75.3
SalBow1G5017 Salvia bowleyana HOM05D005889 ORTHO05D007495 7.3e-24 113.6 77 72.7
Hund20036 Selenicereus undatus HOM05D005889 ORTHO05D007495 7.3e-24 113.6 78 76.9
TAR371G1159 Trochodendron aralioides HOM05D005889 ORTHO05D007495 7.3e-24 113.6 77 76.6
Actinidia06039 Actinidia chinensis HOM05D005889 ORTHO05D007495 9.5e-24 113.2 77 74.0
BcaB01g05020 Brassica carinata HOM05D005889 ORTHO05D007495 9.5e-24 113.2 77 72.7
Ca_04220_v3 Cicer arietinum L. HOM05D005889 ORTHO05D007495 9.5e-24 113.2 78 70.5
Cc07_g02540 Coffea canephora HOM05D005889 ORTHO05D007495 9.5e-24 113.2 77 74.0
PGR083G2278 Punica granatum HOM05D005889 ORTHO05D007495 9.5e-24 113.2 77 75.3
unitig_21.g20501 Utricularia gibba HOM05D005889 ORTHO05D007495 9.5e-24 113.2 78 73.1
SGA_v2.0_scaffold205G41723 Striga asiatica HOM05D005889 ORTHO05D007495 1.2e-23 112.8 77 72.7
Lj2g0018244 Lotus japonicus HOM05D005889 ORTHO05D007495 1.6e-23 112.5 78 69.2
Nn4g22882 Nelumbo nucifera HOM05D005889 ORTHO05D007495 1.6e-23 112.5 77 76.6
Thecc.04G004200 Theobroma cacao HOM05D005889 ORTHO05D007495 2.1e-23 112.1 77 72.7
CSS0028338 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 3.6e-23 111.3 79 72.2
CSS0046645 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 3.6e-23 111.3 77 75.3
Peaxi162Scf00129g00825 Petunia axillaris HOM05D005889 ORTHO05D007495 3.6e-23 111.3 77 71.4
Potri.001G350500 Populus trichocarpa HOM05D005889 ORTHO05D007495 4.7e-23 110.9 77 72.7
Duzib147G1282 Durio zibethinus HOM05D005889 ORTHO05D007495 6.2e-23 110.5 77 72.7
Aqoxy3G03079 Aquilegia oxysepala HOM05D005889 ORTHO05D007495 8.1e-23 110.2 77 70.1
CAN.G206.53 Capsicum annuum HOM05D005889 ORTHO05D007495 8.1e-23 110.2 77 72.7
ECA238G1302 Erigeron canadensis HOM05D005889 ORTHO05D007495 8.1e-23 110.2 77 71.4
PSO832G3377 Papaver somniferum HOM05D005889 ORTHO05D007495 8.1e-23 110.2 77 72.7
FvH4_6g50270 Fragaria vesca HOM05D005889 ORTHO05D007495 1.1e-22 109.8 77 70.1
FAN14G2248 Fragaria x ananassa HOM05D005889 ORTHO05D007495 1.1e-22 109.8 77 70.1
COL.COLO4_32001 Corchorus olitorius HOM05D005889 ORTHO05D007495 1.4e-22 109.4 77 68.8
Oeu047335.1 Olea europaea HOM05D005889 ORTHO05D007495 1.4e-22 109.4 77 72.7
PSO063G7534 Papaver somniferum HOM05D005889 ORTHO05D007495 1.4e-22 109.4 77 72.7
Peaxi162Scf00700g00623 Petunia axillaris HOM05D005889 ORTHO05D007495 1.4e-22 109.4 72 77.8
arahy.Tifrunner.gnm1.ann1.LQS8H1 Arachis hypogaea HOM05D005889 ORTHO05D007495 1.8e-22 109.0 76 71.1
arahy.Tifrunner.gnm1.ann1.XH0R3V Arachis hypogaea HOM05D005889 ORTHO05D007495 1.8e-22 109.0 76 71.1
Gorai.001G259800 Gossypium raimondii HOM05D005889 ORTHO05D007495 2.3e-22 108.6 77 70.1
Lsat_1_v5_gn_2_92760 Lactuca sativa HOM05D005889 ORTHO05D007495 2.3e-22 108.6 76 71.1
RcHm_v2.0_Chr2g0170581 Rosa chinensis HOM05D005889 ORTHO05D007495 3.1e-22 108.2 77 68.8
THA.LOC104822380 Tarenaya hassleriana HOM05D005889 ORTHO05D007495 3.1e-22 108.2 77 68.8
Gohir.D07G225400 Gossypium hirsutum HOM05D005889 ORTHO05D007495 4.0e-22 107.8 77 70.1
CDE01G0491 Ceratophyllum demersum HOM05D005889 ORTHO05D007495 5.2e-22 107.5 77 68.8
Lj7C409T13 Lonicera japonica HOM05D005889 ORTHO05D007495 5.2e-22 107.5 76 69.7
Atru.chr8.2424 Acer truncatum HOM05D005889 ORTHO05D007495 6.8e-22 107.1 80 67.5
Medtr6g007887 Medicago truncatula HOM05D005889 ORTHO05D007495 6.8e-22 107.1 77 67.5
Psat1g080040 Pisum sativum HOM05D005889 ORTHO05D007495 6.8e-22 107.1 79 63.3
Ciclev10012884m.g Citrus clementina HOM05D005889 ORTHO05D007495 8.9e-22 106.7 77 67.5
TWI56G0856 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 8.9e-22 106.7 77 71.4
CDE02G1560 Ceratophyllum demersum HOM05D005889 ORTHO05D007495 1.5e-21 105.9 77 67.5
HanXRQChr12g0385561 Helianthus annuus HOM05D005889 ORTHO05D007495 2.0e-21 105.5 76 68.4
Lalb_Chr21g0319321 Lupinus albus HOM05D000340 ORTHO05D000821 2.0e-21 105.5 77 66.2
Sed0001958 Sechium edule HOM05D005889 ORTHO05D007495 2.6e-21 105.1 77 66.2
FAN02G1209 Fragaria x ananassa HOM05D005889 ORTHO05D007495 3.4e-21 104.8 79 68.4
FAN09G4317 Fragaria x ananassa HOM05D005889 ORTHO05D007495 3.4e-21 104.8 79 68.4
TWI12G0403 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 4.4e-21 104.4 77 68.8
FAN05G0142 Fragaria x ananassa HOM05D005889 ORTHO05D007495 7.5e-21 103.6 79 67.1
TWI56G0985 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 7.5e-21 103.6 77 68.8
Os05g0337400 Oryza sativa ssp. japonica HOM05D005889 ORTHO05D007495 9.9e-21 103.2 75 70.7
ClCG10G014500 Citrullus lanatus HOM05D005889 ORTHO05D007495 1.7e-20 102.4 77 70.1
HanXRQChr14g0448791 Helianthus annuus HOM05D005889 ORTHO05D007495 1.7e-20 102.4 75 69.3
ATR0787G083 Amborella trichopoda HOM05D005889 ORTHO05D007495 1.1e-19 99.8 72 70.8
Zm00001eb286710 Zea mays HOM05D005889 ORTHO05D007495 1.9e-19 99.0 75 66.7
Aa31LG11G14590 Aethionema arabicum HOM05D005889 ORTHO05D007495 9.2e-19 96.7 118 47.5
vmacro05795 Vaccinium macrocarpon HOM05D005889 ORTHO05D007495 1.2e-18 96.3 103 52.4
Pp3c10_16560 Physcomitrium patens HOM05D005889 ORTHO05D007495 6.0e-18 94.0 77 59.7
Pp3c1_25290 Physcomitrium patens HOM05D005889 ORTHO05D007495 1.7e-17 92.4 76 61.8
Mapoly0034s0091 Marchantia polymorpha HOM05D005889 ORTHO05D007495 2.3e-17 92.0 76 61.8
Pp3c2_14600 Physcomitrium patens HOM05D005889 ORTHO05D007495 6.6e-17 90.5 76 57.9
Rhsim10G0027100 Rhododendron simsii HOM05D005889 ORTHO05D007495 2.5e-16 88.6 70 67.1
CSS0042844 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 4.4e-13 77.8 59 72.9
SMO119G0369 Selaginella moellendorffii HOM05D003366 ORTHO05D004045 2.2e-12 75.5 78 46.2
RcHm_v2.0_Chr2g0170541 Rosa chinensis HOM05D005889 ORTHO05D007495 6.4e-12 73.9 60 65.0
TPR.G132 Trifolium pratense HOM05D005889 ORTHO05D007495 3.5e-10 68.2 45 77.8
SEGI_28638 Sequoiadendron giganteum HOM05D005889 ORTHO05D007495 1.9e-08 62.4 75 49.3
SMO163G0046 Selaginella moellendorffii HOM05D003366 ORTHO05D004045 1.6e-07 59.3 78 39.7
TAR629G0556 Trochodendron aralioides HOM05D001690 ORTHO05D009096 8.1e-07 57.0 40 70.0


User provided reference genes

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