Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 9.1e-302 1039.6 606 100.0
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 7.8e-144 515.0 475 62.3
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 1.6e-128 464.2 513 60.2
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 7.2e-113 412.1 490 56.7
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 9.0e-108 395.2 494 55.9
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 4.2e-105 386.3 521 51.4
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 7.2e-105 385.6 504 52.6
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 8.8e-103 378.6 521 52.8
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 8.2e-101 372.1 488 52.9
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 1.4e-100 371.3 494 52.6
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 4.1e-100 369.8 476 54.4
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 9.4e-97 358.6 490 52.2
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 1.2e-96 358.2 501 51.3
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.6e-96 357.8 523 51.6
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 2.1e-96 357.5 518 51.9
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 3.0e-95 353.6 457 54.0
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 3.9e-95 353.2 456 54.2
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 5.1e-95 352.8 490 52.0
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 6.7e-95 352.4 423 56.5
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 5.7e-94 349.4 496 52.2
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 3.7e-93 346.7 481 51.8
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 1.1e-92 345.1 457 53.0
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 1.4e-92 344.7 508 50.4
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 3.1e-92 343.6 489 51.3
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 5.3e-92 342.8 456 52.9
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 2.6e-91 340.5 489 50.9
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 4.5e-91 339.7 522 49.2
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 2.2e-90 337.4 426 56.1
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 6.5e-90 335.9 432 53.2
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 1.9e-89 334.3 505 51.1
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 5.5e-89 332.8 440 53.4
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 7.2e-89 332.4 472 54.4
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 1.2e-88 331.6 492 51.0
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 6.1e-88 329.3 505 49.1
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 3.3e-86 323.6 500 49.6
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 3.3e-86 323.6 511 49.1
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 4.4e-86 323.2 490 48.8
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 7.5e-86 322.4 519 47.4
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 3.7e-85 320.1 477 48.6
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 4.8e-85 319.7 414 54.3
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 5.3e-84 316.2 476 40.8
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 1.2e-83 315.1 522 48.5
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 2.5e-81 307.4 500 47.6
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 9.4e-81 305.4 491 39.7
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 3.0e-79 300.4 517 47.8
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 6.8e-79 299.3 493 47.9
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 1.2e-78 298.5 411 54.0
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 3.4e-78 297.0 462 51.5
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 7.5e-78 295.8 508 45.5
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 1.7e-77 294.7 491 46.4
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 1.8e-76 291.2 468 48.9
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 9.1e-76 288.9 493 46.5
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 7.7e-75 285.8 400 53.5
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 1.0e-74 285.4 509 47.5
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 1.3e-74 285.0 509 45.0
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 1.1e-73 282.0 523 45.1
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 1.9e-73 281.2 403 52.9
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 1.9e-73 281.2 320 49.1
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 1.2e-72 278.5 460 49.1
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.2e-72 278.5 492 45.5
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 1.6e-72 278.1 523 44.7
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 3.0e-71 273.9 504 45.2
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 6.8e-71 272.7 502 46.2
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 2.6e-70 270.8 311 61.4
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 9.8e-70 268.9 544 43.8
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 3.7e-69 266.9 505 45.0
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 3.7e-69 266.9 327 59.0
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 4.9e-69 266.5 510 44.1
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 1.1e-68 265.4 306 62.7
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 8.6e-66 255.8 465 46.9
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 3.3e-65 253.8 324 46.3
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 2.8e-64 250.8 327 44.6
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 4.7e-64 250.0 308 46.4
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 2.2e-61 241.1 492 43.1
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 1.1e-60 238.8 495 43.8
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 1.4e-60 238.4 506 41.3
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.0e-58 232.3 492 42.3
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 9.5e-49 199.1 266 45.9
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 2.0e-46 191.4 236 63.1
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 3.7e-45 187.2 265 41.9
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 2.7e-43 181.0 492 38.6
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 1.2e-40 172.2 258 56.6
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 4.0e-39 167.2 258 55.4
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 4.9e-37 160.2 293 34.1
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 1.2e-32 145.6 138 60.1
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.6e-32 145.2 429 37.3
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 2.9e-29 134.4 89 69.7
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 1.4e-28 132.1 122 55.7
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.4e-28 132.1 95 66.3
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.7e-26 125.2 136 52.2
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 8.7e-26 122.9 245 52.7
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 7.3e-25 119.8 391 37.6
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 1.6e-24 118.6 115 53.0
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 3.8e-21 107.5 125 48.0
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 2.7e-19 101.3 459 24.2
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 7.9e-19 99.8 100 50.0
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 9.6e-17 92.8 109 50.5
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 1.3e-16 92.4 185 37.3
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 2.8e-16 91.3 182 34.1
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 1.5e-14 85.5 179 36.9
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 9.9e-14 82.8 68 55.9
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 1.7e-13 82.0 174 36.8
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 3.2e-12 77.8 73 53.4
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 4.2e-12 77.4 136 38.2
arahy.Tifrunner.gnm1.ann1.EIPD4W Arachis hypogaea HOM05D006674 ORTHO05D007954 5.5e-12 77.0 100 44.0
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 1.6e-11 75.5 129 40.3
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 7.4e-09 66.6 48 62.5
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 9.6e-09 66.2 45 68.9
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 1.6e-08 65.5 46 60.9
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 4.8e-08 63.9 208 27.9
CSS0023659 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.5e-06 58.9 42 66.7
Cre01.g025500 Chlamydomonas reinhardtii HOM05D006674 ORTHO05D141511 5.8e-06 57.0 62 45.2
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 1.0e-05 56.2 76 43.4


User provided reference genes

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