Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03312 Beta vulgaris HOM05D002544 ORTHO05D007856 0.0e+00 1310.4 663 100.0
AUR62040737 Chenopodium quinoa HOM05D002544 ORTHO05D007856 2.6e-294 1015.0 670 77.5
AUR62037665 Chenopodium quinoa HOM05D002544 ORTHO05D007856 1.1e-281 973.0 661 76.1
Ah.10g032440 Amaranthus hybridus HOM05D002544 ORTHO05D007856 4.4e-273 944.5 700 70.0
Sc04g0005080 Simmondsia chinensis HOM05D002544 ORTHO05D007856 6.1e-259 897.5 669 65.8
Hma1.2p1_0158F.1_g070010 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 6.6e-245 850.9 647 64.6
Actinidia17196 Actinidia chinensis HOM05D002544 ORTHO05D007856 3.3e-244 848.6 664 63.1
Dinv19050 Davidia involucrata HOM05D002544 ORTHO05D007856 2.1e-243 845.9 665 62.9
GSVIVG01030701001 Vitis vinifera HOM05D002544 ORTHO05D007856 8.1e-243 844.0 665 63.2
Actinidia06481 Actinidia chinensis HOM05D002544 ORTHO05D007856 3.1e-242 842.0 664 61.9
MD17G1267200 Malus domestica HOM05D002544 ORTHO05D007856 1.2e-241 840.1 665 63.5
Manes.02G078600 Manihot esculenta HOM05D002544 ORTHO05D007856 6.4e-240 834.3 655 61.2
Nn3g18419 Nelumbo nucifera HOM05D002544 ORTHO05D007856 1.1e-239 833.6 668 62.0
QL03p020295 Quercus lobata HOM05D002544 ORTHO05D007856 7.1e-239 830.9 666 62.2
CSS0008925 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 3.5e-238 828.6 672 62.1
Rhsim10G0180300 Rhododendron simsii HOM05D002544 ORTHO05D007856 4.6e-238 828.2 670 62.1
TAR622G0658 Trochodendron aralioides HOM05D002544 ORTHO05D007856 4.6e-238 828.2 664 62.3
CSS0046327 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 6.0e-238 827.8 670 61.9
Ciclev10000514m.g Citrus clementina HOM05D002544 ORTHO05D007856 1.0e-237 827.0 664 61.7
Prupe.3G165300 Prunus persica HOM05D002544 ORTHO05D007856 1.3e-237 826.6 645 63.6
RcHm_v2.0_Chr3g0492061 Rosa chinensis HOM05D002544 ORTHO05D007856 6.6e-237 824.3 669 61.9
TWI53G0412 Tripterygium wilfordii HOM05D002544 ORTHO05D007856 1.2e-235 820.1 663 61.4
CiPaw.03G074200 Carya illinoinensis HOM05D002544 ORTHO05D007856 1.6e-235 819.7 643 62.5
FvH4_1g30060 Fragaria vesca HOM05D002544 ORTHO05D007856 2.1e-235 819.3 664 61.6
Atru.chr1.2033 Acer truncatum HOM05D002544 ORTHO05D007856 4.7e-235 818.1 670 61.3
Gorai.009G304200 Gossypium raimondii HOM05D002544 ORTHO05D007856 1.4e-234 816.6 664 61.1
Gohir.D05G289100 Gossypium hirsutum HOM05D002544 ORTHO05D007856 1.8e-234 816.2 664 61.0
Lj4A258G27 Lonicera japonica HOM05D002544 ORTHO05D007856 3.1e-234 815.5 652 63.0
Gohir.A05G287900 Gossypium hirsutum HOM05D002544 ORTHO05D007856 1.7e-232 809.7 664 60.4
Glyma.18G041900 Glycine max HOM05D002544 ORTHO05D007856 3.8e-232 808.5 667 59.7
TPR.G23205 Trifolium pratense HOM05D002544 ORTHO05D007856 3.8e-232 808.5 666 60.2
Ca_17085_v3 Cicer arietinum L. HOM05D002544 ORTHO05D007856 1.9e-231 806.2 643 61.4
Potri.004G082900 Populus trichocarpa HOM05D002544 ORTHO05D007856 1.9e-231 806.2 665 59.7
Carub.0005s1906 Capsella rubella HOM05D002544 ORTHO05D007856 2.7e-230 802.4 663 59.9
AL5G33420 Arabidopsis lyrata HOM05D002544 ORTHO05D007856 3.5e-230 802.0 665 59.7
CANSAT25G3407 Cannabis sativa HOM05D002544 ORTHO05D007856 3.5e-230 802.0 663 60.5
PGR004G1819 Punica granatum HOM05D002544 ORTHO05D007856 3.5e-230 802.0 667 59.2
AT3G52640 Arabidopsis thaliana HOM05D002544 ORTHO05D007856 6.0e-230 801.2 663 59.3
Duzib128G1814 Durio zibethinus HOM05D002544 ORTHO05D007856 1.7e-229 799.7 693 58.3
Medtr3g065110 Medicago truncatula HOM05D002544 ORTHO05D007856 1.7e-229 799.7 662 59.4
vmacro20587 Vaccinium macrocarpon HOM05D002544 ORTHO05D007856 1.7e-229 799.7 678 59.7
Sp5g09650 Schrenkiella parvula HOM05D002544 ORTHO05D007856 3.0e-229 798.9 663 59.3
Eucgr.F02879 Eucalyptus grandis HOM05D002544 ORTHO05D007856 6.6e-229 797.7 682 58.7
A04p06810 Brassica napus HOM05D002544 ORTHO05D007856 8.6e-229 797.3 668 59.4
Lalb_Chr18g0053551 Lupinus albus HOM05D002544 ORTHO05D007856 5.6e-228 794.7 669 59.5
Lj6g0017134 Lotus japonicus HOM05D002544 ORTHO05D007856 1.2e-227 793.5 670 58.5
Haze_14286 Corylus avellana HOM05D002544 ORTHO05D007856 2.1e-227 792.7 661 60.1
arahy.Tifrunner.gnm1.ann1.5E142I Arachis hypogaea HOM05D002544 ORTHO05D007856 3.6e-227 792.0 664 59.2
Sopen11g006270 Solanum pennellii HOM05D002544 ORTHO05D007856 1.4e-226 790.0 672 59.4
Glyma.11G214700 Glycine max HOM05D002544 ORTHO05D007856 2.4e-226 789.3 663 58.8
VMungo1383G1931 Vigna mungo HOM05D002544 ORTHO05D007856 2.4e-226 789.3 660 58.9
Solyc11g011480.2 Solanum lycopersicum HOM05D002544 ORTHO05D007856 3.1e-226 788.9 672 59.4
arahy.Tifrunner.gnm1.ann1.644H52 Arachis hypogaea HOM05D002544 ORTHO05D007856 6.9e-226 787.7 668 58.2
DCAR_014158 Daucus carota HOM05D002544 ORTHO05D007856 8.9e-226 787.3 664 59.8
Phvul.001G228700 Phaseolus vulgaris HOM05D002544 ORTHO05D007856 3.8e-224 781.9 670 58.2
THA.LOC104805637 Tarenaya hassleriana HOM05D002544 ORTHO05D007856 3.8e-224 781.9 698 55.7
BcaB02g08559 Brassica carinata HOM05D002544 ORTHO05D007856 6.4e-224 781.2 665 58.3
BcaC02g09234 Brassica carinata HOM05D002544 ORTHO05D007856 6.4e-224 781.2 669 58.1
C04p40360 Brassica napus HOM05D002544 ORTHO05D007856 8.4e-224 780.8 668 58.4
COL.COLO4_38545 Corchorus olitorius HOM05D002544 ORTHO05D007856 8.4e-224 780.8 693 57.0
Aqoxy3G04067 Aquilegia oxysepala HOM05D002544 ORTHO05D007856 3.2e-223 778.9 664 59.2
Thhalv10010197m.g Eutrema salsugineum HOM05D002544 ORTHO05D007856 3.2e-223 778.9 634 59.5
BraA04t16380Z Brassica rapa HOM05D002544 ORTHO05D007856 7.1e-223 777.7 719 55.2
CAN.G222.63 Capsicum annuum HOM05D002544 ORTHO05D007856 7.8e-222 774.2 672 58.8
PSO063G6024 Papaver somniferum HOM05D002544 ORTHO05D007856 7.8e-222 774.2 664 58.9
Aa31LG10G7700 Aethionema arabicum HOM05D002544 ORTHO05D007856 1.3e-221 773.5 682 56.6
Nitab4.5_0011135g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 3.0e-221 772.3 649 59.3
Sed0025118 Sechium edule HOM05D002544 ORTHO05D007856 3.9e-221 771.9 661 58.1
PSO782G4267 Papaver somniferum HOM05D002544 ORTHO05D007856 5.6e-220 768.1 664 58.6
Migut.K00933 Erythranthe guttata HOM05D002544 ORTHO05D007856 6.9e-218 761.1 666 57.8
FAN28G1090 Fragaria x ananassa HOM05D002544 ORTHO05D007856 9.0e-218 760.8 661 58.9
Sabra04G0055200 Salix brachista HOM05D002544 ORTHO05D007856 1.5e-217 760.0 737 53.6
CsaV3_3G017820 Cucumis sativus L. HOM05D002544 ORTHO05D007856 3.4e-217 758.8 663 57.6
BolC4t25616H Brassica oleracea HOM05D002544 ORTHO05D007856 1.1e-215 753.8 738 52.8
Oeu030291.2 Olea europaea HOM05D002544 ORTHO05D007856 4.2e-215 751.9 723 54.4
ATR0118G015 Amborella trichopoda HOM05D002544 ORTHO05D007856 2.8e-211 739.2 665 57.1
HanXRQChr16g0532811 Helianthus annuus HOM05D002544 ORTHO05D007856 3.6e-211 738.8 671 57.4
Cfa007785 Carpinus fangiana HOM05D002544 ORTHO05D007856 1.8e-210 736.5 636 58.0
Lsat_1_v5_gn_3_63981 Lactuca sativa HOM05D002544 ORTHO05D007856 6.4e-208 728.0 641 57.4
Peaxi162Scf00464g00433 Petunia axillaris HOM05D002544 ORTHO05D007856 5.6e-204 714.9 648 56.2
FAN19G2740 Fragaria x ananassa HOM05D002544 ORTHO05D007856 2.8e-203 712.6 579 61.3
Thecc.10G105700 Theobroma cacao HOM05D002544 ORTHO05D007856 6.2e-203 711.4 583 61.4
Os02g0736500 Oryza sativa ssp. japonica HOM05D002544 ORTHO05D007856 4.0e-202 708.8 670 54.0
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 1.5e-201 706.8 658 54.6
Zm00001eb190390 Zea mays HOM05D002544 ORTHO05D007856 3.4e-201 705.7 665 54.6
Psat5g119600 Pisum sativum HOM05D002544 ORTHO05D007856 2.5e-199 699.5 577 60.8
ClCG05G010690 Citrullus lanatus HOM05D002544 ORTHO05D007856 7.4e-196 688.0 695 52.9
MBI13_g24909_MAGBIO Magnolia biondii HOM05D002544 ORTHO05D007856 2.8e-195 686.0 703 52.5
CDE05G1209 Ceratophyllum demersum HOM05D002544 ORTHO05D007856 1.4e-194 683.7 662 52.9
Cc07_g13210 Coffea canephora HOM05D002544 ORTHO05D007856 3.1e-194 682.6 572 60.1
SGA_v2.0_scaffold45G17141 Striga asiatica HOM05D002544 ORTHO05D007277 7.6e-193 677.9 638 55.8
Cpa.g.sc116.76 Carica papaya HOM05D002544 ORTHO05D007856 9.3e-191 671.0 557 60.5
FAN26G1528 Fragaria x ananassa HOM05D002544 ORTHO05D007856 2.5e-188 662.9 663 53.2
Nitab4.5_0006562g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 1.8e-186 656.8 630 54.1
PGSC0003DMG400013310 Solanum tuberosum HOM05D002544 ORTHO05D007856 4.2e-175 619.0 514 62.1
CARHR162460 Cardamine hirsuta HOM05D002544 ORTHO05D007856 3.0e-173 612.8 505 60.4
unitig_748.g8462 Utricularia gibba HOM05D002544 ORTHO05D007856 1.3e-171 607.4 673 49.3
HPP92_026943 Vanilla planifolia HOM05D002544 ORTHO05D007856 2.9e-168 596.3 593 52.1
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 2.3e-165 586.6 623 50.4
Mapoly0182s0008 Marchantia polymorpha HOM05D002544 ORTHO05D007856 1.2e-164 584.3 676 46.6
SMO115G0276 Selaginella moellendorffii HOM05D002544 ORTHO05D007856 4.2e-159 565.8 649 47.3
AagrBONN_evm.TU.Sc2ySwM_228.3612 Anthoceros agrestis HOM05D002544 ORTHO05D007856 4.0e-141 506.1 678 42.5
Hma1.2p1_0158F.1_g070020 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 1.6e-126 457.6 351 64.4
Pp3c25_11440 Physcomitrium patens HOM05D002544 ORTHO05D007856 1.3e-112 411.4 585 43.1
Hund13079 Selenicereus undatus HOM05D002544 ORTHO05D007856 3.3e-111 406.8 349 60.2
QL02p059469 Quercus lobata HOM05D002544 ORTHO05D007856 7.3e-103 379.0 320 58.4
Lj4C412G0 Lonicera japonica HOM05D002544 ORTHO05D007856 6.2e-86 322.8 642 34.7
SEGI_34556 Sequoiadendron giganteum HOM05D002544 ORTHO05D007856 2.3e-80 304.3 302 49.3
HPP92_021312 Vanilla planifolia HOM05D002544 ORTHO05D007856 4.3e-71 273.5 240 61.2
Cre06.g294400 Chlamydomonas reinhardtii HOM05D002544 ORTHO05D007856 9.7e-71 272.3 646 31.1
Zm00001eb382220 Zea mays HOM05D002544 ORTHO05D007856 2.4e-61 241.1 334 44.6
CARHR162470 Cardamine hirsuta HOM05D002544 ORTHO05D007856 1.2e-47 195.7 174 53.4
MCO14G034 Micromonas commoda HOM05D002544 ORTHO05D007856 7.0e-45 186.4 732 26.6
CBR_g26303 Chara braunii HOM05D002544 ORTHO05D000002 1.4e-40 172.2 324 31.2
Zm00001eb280470 Zea mays HOM05D003723 ORTHO05D004306 1.9e-34 151.8 313 31.0
CBR_g37928 Chara braunii HOM05D000601 ORTHO05D000301 2.2e-30 138.3 177 42.9
Zm00001eb289130 Zea mays HOM05D002544 ORTHO05D007856 3.7e-30 137.5 115 62.6
Zm00001eb340210 Zea mays HOM05D002544 ORTHO05D007856 4.7e-25 120.6 119 48.7
Cc07_g13200 Coffea canephora HOM05D002544 ORTHO05D007856 2.3e-24 118.2 99 57.6
CBR_g26304 Chara braunii HOM05D002544 ORTHO05D007856 6.8e-24 116.7 115 56.5
HPP92_026942 Vanilla planifolia HOM05D002544 ORTHO05D007856 7.3e-18 96.7 95 53.7
HPP92_021314 Vanilla planifolia HOM05D002544 ORTHO05D007856 1.7e-14 85.5 68 60.3
Hma1.2p1_0594F.1_g185860 Hydrangea macrophylla HOM05D006828 ORTHO05D008312 3.2e-13 81.3 78 52.6
Haze_22892 Corylus avellana HOM05D002544 ORTHO05D007856 5.4e-13 80.5 102 42.2
HPP92_021313 Vanilla planifolia HOM05D002544 ORTHO05D007856 1.2e-12 79.3 64 45.3
C04p40260 Brassica napus HOM05D002544 ORTHO05D007856 6.0e-12 77.0 62 51.6
BolC4t25605H Brassica oleracea HOM05D002544 ORTHO05D007856 6.0e-12 77.0 62 51.6
FAN12G0356 Fragaria x ananassa HOM05D002544 ORTHO05D007856 6.6e-11 73.6 47 72.3
FvH4_4g11392 Fragaria vesca HOM05D000005 ORTHO05D000012 1.5e-10 72.4 47 70.2
FAN02G2717 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.5e-10 72.4 47 70.2
QL02p059474 Quercus lobata HOM05D002544 ORTHO05D007856 1.2e-09 69.3 38 73.7
FAN02G1722 Fragaria x ananassa HOM05D002544 ORTHO05D007856 2.8e-09 68.2 47 68.1
CSS0029470 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D033931 5.2e-08 63.9 45 66.7
Gohir.A10G100500 Gossypium hirsutum HOM05D002544 ORTHO05D033931 8.9e-08 63.2 42 71.4
CSS0043407 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D033931 1.2e-07 62.8 45 64.4


User provided reference genes

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