Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03280 Beta vulgaris HOM05D002966 ORTHO05D003274 7.1e-47 190.3 98 100.0
Ah.16g106440 Amaranthus hybridus HOM05D002966 ORTHO05D003274 3.1e-42 174.9 98 85.7
AUR62026777 Chenopodium quinoa HOM05D002966 ORTHO05D003274 1.5e-41 172.6 98 87.8
Gohir.A01G096300 Gossypium hirsutum HOM05D002966 ORTHO05D003274 1.5e-41 172.6 98 87.8
Gohir.D01G080600 Gossypium hirsutum HOM05D002966 ORTHO05D003274 1.5e-41 172.6 98 87.8
Gorai.002G105300 Gossypium raimondii HOM05D002966 ORTHO05D003274 1.5e-41 172.6 98 87.8
Duzib213G0090 Durio zibethinus HOM05D002966 ORTHO05D003274 7.7e-41 170.2 98 86.7
Lj1P909T68 Lonicera japonica HOM05D002966 ORTHO05D003274 1.0e-40 169.9 98 85.7
Actinidia14217 Actinidia chinensis HOM05D002966 ORTHO05D003274 1.3e-40 169.5 98 84.7
Thecc.07G160900 Theobroma cacao HOM05D002966 ORTHO05D003274 2.2e-40 168.7 98 86.7
COL.COLO4_38362 Corchorus olitorius HOM05D002966 ORTHO05D003274 3.8e-40 167.9 98 84.7
Haze_20101 Corylus avellana HOM05D002966 ORTHO05D003274 3.8e-40 167.9 98 84.7
Hma1.2p1_0151F.1_g067530 Hydrangea macrophylla HOM05D002966 ORTHO05D003274 6.5e-40 167.2 98 83.7
Haze_20100 Corylus avellana HOM05D002966 ORTHO05D003274 1.1e-39 166.4 98 83.7
CSS0037695 Camellia sinensis var. sinensis HOM05D002966 ORTHO05D003274 1.9e-39 165.6 98 82.7
CSS0042932 Camellia sinensis var. sinensis HOM05D002966 ORTHO05D003274 1.9e-39 165.6 98 82.7
CiPaw.11G063400 Carya illinoinensis HOM05D002966 ORTHO05D003274 1.9e-39 165.6 98 82.7
Manes.15G015100 Manihot esculenta HOM05D002966 ORTHO05D003274 1.9e-39 165.6 98 84.7
vmacro11714 Vaccinium macrocarpon HOM05D002966 ORTHO05D003274 2.5e-39 165.2 98 83.7
HanXRQChr11g0335081 Helianthus annuus HOM05D002966 ORTHO05D003274 3.2e-39 164.9 98 83.7
Eucgr.F04302 Eucalyptus grandis HOM05D002966 ORTHO05D003274 4.2e-39 164.5 98 81.6
Eucgr.F04429 Eucalyptus grandis HOM05D002966 ORTHO05D003274 4.2e-39 164.5 98 81.6
Rhsim06G0240500 Rhododendron simsii HOM05D002966 ORTHO05D003274 4.2e-39 164.5 98 82.7
Ciclev10005912m.g Citrus clementina HOM05D002966 ORTHO05D003274 5.5e-39 164.1 98 82.7
PGR031G3508 Punica granatum HOM05D002966 ORTHO05D003274 7.2e-39 163.7 98 80.6
RcHm_v2.0_Chr5g0025961 Rosa chinensis HOM05D002966 ORTHO05D003274 1.2e-38 162.9 98 79.6
FAN16G2402 Fragaria x ananassa HOM05D002966 ORTHO05D003274 1.6e-38 162.5 98 79.6
Oeu002798.1 Olea europaea HOM05D002966 ORTHO05D003274 1.6e-38 162.5 98 81.6
Sabra05G0079100 Salix brachista HOM05D002966 ORTHO05D003274 2.1e-38 162.2 98 82.7
FvH4_3g15460 Fragaria vesca HOM05D002966 ORTHO05D003274 3.6e-38 161.4 98 78.6
FAN21G2350 Fragaria x ananassa HOM05D002966 ORTHO05D003274 3.6e-38 161.4 98 78.6
Potri.005G096100 Populus trichocarpa HOM05D002966 ORTHO05D003274 4.6e-38 161.0 98 82.7
CANSAT80G1447 Cannabis sativa HOM05D002966 ORTHO05D003274 6.1e-38 160.6 98 79.6
Dinv19602 Davidia involucrata HOM05D002966 ORTHO05D003274 6.1e-38 160.6 97 81.4
Nn7g37912 Nelumbo nucifera HOM05D002966 ORTHO05D003274 6.1e-38 160.6 98 80.6
QL04p077258 Quercus lobata HOM05D002966 ORTHO05D003274 1.0e-37 159.8 97 79.4
Solyc07g066540.1 Solanum lycopersicum HOM05D002966 ORTHO05D003274 1.0e-37 159.8 98 79.6
ClCG09G022620 Citrullus lanatus HOM05D002966 ORTHO05D003274 1.4e-37 159.5 97 77.3
BcaC05g29231 Brassica carinata HOM05D002966 ORTHO05D003274 1.8e-37 159.1 98 79.6
C05p55060 Brassica napus HOM05D002966 ORTHO05D003274 1.8e-37 159.1 98 79.6
BolC5t34174H Brassica oleracea HOM05D002966 ORTHO05D003274 1.8e-37 159.1 98 79.6
Sopen07g034700 Solanum pennellii HOM05D002966 ORTHO05D003274 1.8e-37 159.1 98 79.6
PGSC0003DMG400022234 Solanum tuberosum HOM05D002966 ORTHO05D003274 2.3e-37 158.7 98 79.6
TWI39G0520 Tripterygium wilfordii HOM05D002966 ORTHO05D003274 3.0e-37 158.3 98 77.6
Migut.H01679 Erythranthe guttata HOM05D002966 ORTHO05D003274 3.9e-37 157.9 98 78.6
AL3G24540 Arabidopsis lyrata HOM05D002966 ORTHO05D003274 5.1e-37 157.5 98 79.6
A05p36630 Brassica napus HOM05D002966 ORTHO05D003274 5.1e-37 157.5 98 78.6
BraA05t22467Z Brassica rapa HOM05D002966 ORTHO05D003274 5.1e-37 157.5 98 78.6
Carub.0003s1223 Capsella rubella HOM05D002966 ORTHO05D003274 5.1e-37 157.5 98 79.6
MD05G1223200 Malus domestica HOM05D002966 ORTHO05D003274 5.1e-37 157.5 98 77.6
Nitab4.5_0002321g0020 Nicotiana tabacum HOM05D002966 ORTHO05D003274 5.1e-37 157.5 98 77.6
BcaB06g25505 Brassica carinata HOM05D002966 ORTHO05D003274 6.7e-37 157.1 98 78.6
CsaV3_7G022780 Cucumis sativus L. HOM05D002966 ORTHO05D003274 6.7e-37 157.1 97 76.3
FAN11G0046 Fragaria x ananassa HOM05D002966 ORTHO05D003274 6.7e-37 157.1 98 77.6
Prupe.4G137100 Prunus persica HOM05D002966 ORTHO05D003274 6.7e-37 157.1 98 78.6
Sp3g11010 Schrenkiella parvula HOM05D002966 ORTHO05D003274 6.7e-37 157.1 98 79.6
MELO3C012619.2 Cucumis melo HOM05D002966 ORTHO05D003274 8.8e-37 156.8 97 76.3
TWI38G0569 Tripterygium wilfordii HOM05D002966 ORTHO05D003274 8.8e-37 156.8 98 77.6
Aqoxy1G01476 Aquilegia oxysepala HOM05D002966 ORTHO05D003274 1.1e-36 156.4 95 78.9
AT3G12870 Arabidopsis thaliana HOM05D002966 ORTHO05D003274 1.1e-36 156.4 98 78.6
Actinidia07368 Actinidia chinensis HOM05D002966 ORTHO05D003274 1.5e-36 156.0 95 78.9
CARHR087390 Cardamine hirsuta HOM05D002966 ORTHO05D003274 1.5e-36 156.0 98 77.6
DCAR_019925 Daucus carota HOM05D002966 ORTHO05D003274 1.5e-36 156.0 98 75.5
MD10G1204600 Malus domestica HOM05D002966 ORTHO05D003274 1.5e-36 156.0 98 76.5
A01p40690 Brassica napus HOM05D002966 ORTHO05D003274 2.5e-36 155.2 98 77.6
BolC1t05175H Brassica oleracea HOM05D002966 ORTHO05D003274 2.5e-36 155.2 98 78.6
BraA01t04103Z Brassica rapa HOM05D002966 ORTHO05D003274 2.5e-36 155.2 98 77.6
Manes.17G045900 Manihot esculenta HOM05D002966 ORTHO05D003274 2.5e-36 155.2 98 78.6
Lsat_1_v5_gn_2_120921 Lactuca sativa HOM05D002966 ORTHO05D003274 3.3e-36 154.8 98 77.6
Cpa.g.c29671.3 Carica papaya HOM05D002966 ORTHO05D003274 4.3e-36 154.5 98 76.5
Thhalv10021525m.g Eutrema salsugineum HOM05D002966 ORTHO05D003274 4.3e-36 154.5 99 78.8
MSTRG.14551 Avicennia marina HOM05D002966 ORTHO05D003274 5.7e-36 154.1 98 76.5
BcaC09g48267 Brassica carinata HOM05D002966 ORTHO05D003274 7.4e-36 153.7 99 78.8
C01p52320 Brassica napus HOM05D002966 ORTHO05D003274 7.4e-36 153.7 99 78.8
FAN25G2501 Fragaria x ananassa HOM05D002966 ORTHO05D003274 7.4e-36 153.7 95 77.9
Cc00_g21090 Coffea canephora HOM05D002966 ORTHO05D003274 9.7e-36 153.3 98 76.5
SalBow8G2246 Salvia bowleyana HOM05D002966 ORTHO05D003274 9.7e-36 153.3 98 77.6
Atru.BG.175.p Acer truncatum HOM05D002966 ORTHO05D003274 1.3e-35 152.9 92 80.4
PSO170G3509 Papaver somniferum HOM05D002966 ORTHO05D003274 1.3e-35 152.9 97 75.3
THA.LOC104810266 Tarenaya hassleriana HOM05D002966 ORTHO05D003274 1.3e-35 152.9 98 76.5
Aqoxy6G02814 Aquilegia oxysepala HOM05D002966 ORTHO05D003274 1.7e-35 152.5 96 75.0
MBI02_g00520_MAGBIO Magnolia biondii HOM05D002966 ORTHO05D003274 1.7e-35 152.5 94 78.7
BcaB04g21042 Brassica carinata HOM05D002966 ORTHO05D003274 2.2e-35 152.1 99 76.8
PSO528G0254 Papaver somniferum HOM05D002966 ORTHO05D003274 2.2e-35 152.1 97 75.3
Sed0021245 Sechium edule HOM05D002966 ORTHO05D003274 2.2e-35 152.1 97 73.2
Sed0002257 Sechium edule HOM05D002966 ORTHO05D003274 2.8e-35 151.8 97 73.2
ATR0763G105 Amborella trichopoda HOM05D002966 ORTHO05D003274 1.1e-34 149.8 98 72.4
Glyma.04G098800 Glycine max HOM05D002966 ORTHO05D003274 3.1e-34 148.3 98 72.4
Glyma.06G100500 Glycine max HOM05D002966 ORTHO05D003274 6.9e-34 147.1 98 71.4
TPR.G28745 Trifolium pratense HOM05D002966 ORTHO05D003274 1.2e-33 146.4 98 71.4
Medtr8g445730 Medicago truncatula HOM05D002966 ORTHO05D003274 2.0e-33 145.6 98 71.4
Ca_00875_v3 Cicer arietinum L. HOM05D002966 ORTHO05D003274 3.4e-33 144.8 98 72.4
Ca_29620_v3 Cicer arietinum L. HOM05D002966 ORTHO05D003274 3.4e-33 144.8 98 72.4
Aa31LG8G110 Aethionema arabicum HOM05D002966 ORTHO05D003274 7.7e-33 143.7 96 74.0
Phvul.009G033300 Phaseolus vulgaris HOM05D002966 ORTHO05D003274 7.7e-33 143.7 98 71.4
Lj3g0018587 Lotus japonicus HOM05D002966 ORTHO05D003274 1.0e-32 143.3 96 74.0
SHI21411 Sapria himalayana HOM05D002966 ORTHO05D003274 1.0e-32 143.3 98 71.4
VMungo1309G0555 Vigna mungo HOM05D002966 ORTHO05D003274 2.9e-32 141.7 98 71.4
Psat4g176920 Pisum sativum HOM05D002966 ORTHO05D003274 6.5e-32 140.6 98 70.4
SGA_v2.0_scaffold7G03599 Striga asiatica HOM05D002966 ORTHO05D003274 6.5e-32 140.6 96 71.9
Lalb_Chr19g0133331 Lupinus albus HOM05D002966 ORTHO05D003274 5.5e-31 137.5 98 69.4
HPP92_000947 Vanilla planifolia HOM05D002966 ORTHO05D003274 5.5e-31 137.5 100 72.0
Lalb_Chr03g0031721 Lupinus albus HOM05D002966 ORTHO05D003274 4.7e-30 134.4 102 67.6
unitig_744.g24504 Utricularia gibba HOM05D004000 ORTHO05D004629 3.0e-29 131.7 93 66.7
Cfa019003 Carpinus fangiana HOM05D002966 ORTHO05D003274 1.3e-27 126.3 77 81.8
Cfa010899 Carpinus fangiana HOM05D002966 ORTHO05D003274 1.1e-26 123.2 77 79.2
Cfa020466 Carpinus fangiana HOM05D002966 ORTHO05D003274 4.1e-26 121.3 85 72.9
SGA_v2.0_scaffold239G44041 Striga asiatica HOM05D002966 ORTHO05D003274 7.7e-25 117.1 99 58.6
Os03g0778400 Oryza sativa ssp. japonica HOM05D002966 ORTHO05D003274 2.9e-24 115.2 104 57.7
MD01G1075700 Malus domestica HOM05D002966 ORTHO05D003274 3.8e-24 114.8 75 76.0
Zm00001eb213650 Zea mays HOM05D002966 ORTHO05D003274 3.8e-24 114.8 101 58.4
MD12G1131000 Malus domestica HOM05D002966 ORTHO05D003274 1.1e-23 113.2 80 70.0
Nitab4.5_0002633g0040 Nicotiana tabacum HOM05D002966 ORTHO05D003274 5.5e-23 110.9 79 68.4
Zm00001eb057330 Zea mays HOM05D002966 ORTHO05D003274 1.6e-22 109.4 102 55.9
Lsat_1_v5_gn_4_112101 Lactuca sativa HOM05D002966 ORTHO05D003274 2.3e-21 105.5 79 74.7
Zm00001eb059720 Zea mays HOM05D002966 ORTHO05D003274 8.8e-21 103.6 102 52.9
Peaxi162Scf00452g00614 Petunia axillaris HOM05D002966 ORTHO05D003274 1.1e-20 103.2 58 86.2
Zm00001eb059740 Zea mays HOM05D002966 ORTHO05D003274 9.7e-20 100.1 102 51.0
Oeu034059.1 Olea europaea HOM05D002966 ORTHO05D003274 6.3e-19 97.4 67 74.6
SEGI_34145 Sequoiadendron giganteum HOM05D002966 ORTHO05D003274 2.7e-14 82.0 99 45.5
Cfa010900 Carpinus fangiana HOM05D002966 ORTHO05D003274 4.5e-09 64.7 41 68.3


User provided reference genes

Program Settings