Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03265 Beta vulgaris HOM05D004277 ORTHO05D005148 0.0e+00 3060.8 1572 100.0
AUR62006227 Chenopodium quinoa HOM05D004277 ORTHO05D005148 0.0e+00 1929.5 1372 73.3
AUR62036983 Chenopodium quinoa HOM05D004277 ORTHO05D005148 0.0e+00 1829.3 1335 72.2
Ah.02g131470 Amaranthus hybridus HOM05D004277 ORTHO05D005148 0.0e+00 1796.2 1363 69.7
Sc06g0002790 Simmondsia chinensis HOM05D004277 ORTHO05D005148 0.0e+00 1508.0 1371 59.7
GSVIVG01036797001 Vitis vinifera HOM05D004277 ORTHO05D005148 0.0e+00 1478.8 1390 57.4
CANSAT80G1893 Cannabis sativa HOM05D004277 ORTHO05D005148 0.0e+00 1412.9 1380 55.3
CiPaw.11G062700 Carya illinoinensis HOM05D004277 ORTHO05D005148 0.0e+00 1408.7 1398 55.2
RcHm_v2.0_Chr5g0025751 Rosa chinensis HOM05D004277 ORTHO05D005148 0.0e+00 1404.4 1360 55.9
FvH4_3g15310 Fragaria vesca HOM05D004277 ORTHO05D005148 0.0e+00 1404.0 1371 55.1
FAN16G3091 Fragaria x ananassa HOM05D004277 ORTHO05D005148 0.0e+00 1402.9 1371 54.9
FAN11G0660 Fragaria x ananassa HOM05D004277 ORTHO05D005148 0.0e+00 1402.1 1371 55.0
Nn3g21002 Nelumbo nucifera HOM05D004277 ORTHO05D005148 0.0e+00 1402.1 1389 54.2
FAN21G0666 Fragaria x ananassa HOM05D004277 ORTHO05D005148 0.0e+00 1399.0 1373 55.3
Atru.chr1.126 Acer truncatum HOM05D004277 ORTHO05D005148 0.0e+00 1380.5 1371 55.7
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 0.0e+00 1378.2 1329 57.0
Aqoxy7G03893 Aquilegia oxysepala HOM05D004277 ORTHO05D005148 0.0e+00 1374.0 1374 54.6
vmacro11705 Vaccinium macrocarpon HOM05D004277 ORTHO05D005148 0.0e+00 1373.2 1431 54.2
Gohir.D08G252532 Gossypium hirsutum HOM05D004277 ORTHO05D005148 0.0e+00 1372.1 1354 56.1
Oeu019710.1 Olea europaea HOM05D004277 ORTHO05D005148 0.0e+00 1366.3 1385 54.3
COL.COLO4_05147 Corchorus olitorius HOM05D004277 ORTHO05D004634 0.0e+00 1362.1 1392 55.1
Gohir.A08G232300 Gossypium hirsutum HOM05D004277 ORTHO05D005148 0.0e+00 1355.1 1356 55.5
TWI38G1370 Tripterygium wilfordii HOM05D004277 ORTHO05D005148 0.0e+00 1349.3 1373 53.8
Actinidia12771 Actinidia chinensis HOM05D004277 ORTHO05D005148 0.0e+00 1339.3 1344 55.4
Potri.007G067700 Populus trichocarpa HOM05D004277 ORTHO05D005148 0.0e+00 1335.1 1361 55.3
Lj2A15G78 Lonicera japonica HOM05D004277 ORTHO05D005148 0.0e+00 1330.9 1305 56.4
Rhsim06G0241600 Rhododendron simsii HOM05D004277 ORTHO05D005148 0.0e+00 1328.5 1413 53.9
CSS0042003 Camellia sinensis var. sinensis HOM05D004277 ORTHO05D005148 0.0e+00 1317.4 1379 54.4
PSO210G0403 Papaver somniferum HOM05D004277 ORTHO05D005148 0.0e+00 1313.5 1379 52.6
CsaV3_7G022870 Cucumis sativus L. HOM05D004277 ORTHO05D005148 0.0e+00 1308.9 1370 52.9
Manes.03G176500 Manihot esculenta HOM05D004277 ORTHO05D005148 0.0e+00 1307.4 1337 54.8
Sabra07G0053700 Salix brachista HOM05D004277 ORTHO05D005148 0.0e+00 1300.4 1385 53.8
Sed0006880 Sechium edule HOM05D004277 ORTHO05D005148 0.0e+00 1290.4 1375 53.2
PSO210G1337 Papaver somniferum HOM05D004277 ORTHO05D005148 0.0e+00 1290.0 1380 52.0
SGA_v2.0_scaffold239G44031 Striga asiatica HOM05D004277 ORTHO05D005148 0.0e+00 1280.8 1414 51.3
Lj2g0013005 Lotus japonicus HOM05D004277 ORTHO05D005148 0.0e+00 1271.5 1378 52.0
Cc05_g16300 Coffea canephora HOM05D004277 ORTHO05D005148 0.0e+00 1269.2 1373 51.8
Glyma.09G284900 Glycine max HOM05D004277 ORTHO05D005148 0.0e+00 1269.2 1371 53.0
Ca_12388_v3 Cicer arietinum L. HOM05D004277 ORTHO05D005148 0.0e+00 1266.9 1410 51.7
SalBow7G4120 Salvia bowleyana HOM05D004277 ORTHO05D005148 0.0e+00 1266.5 1401 51.4
ClCG09G022670 Citrullus lanatus HOM05D004277 ORTHO05D005148 0.0e+00 1265.8 1451 49.9
Ciclev10007189m.g Citrus clementina HOM05D004277 ORTHO05D005148 0.0e+00 1263.4 1357 52.4
Ca_12380_v3 Cicer arietinum L. HOM05D004277 ORTHO05D005148 0.0e+00 1261.9 1389 52.2
Thhalv10018016m.g Eutrema salsugineum HOM05D004277 ORTHO05D005148 0.0e+00 1259.2 1366 50.9
Peaxi162Scf00006g01510 Petunia axillaris HOM05D004277 ORTHO05D005148 0.0e+00 1259.2 1369 51.4
PGR031G1415 Punica granatum HOM05D004277 ORTHO05D005148 0.0e+00 1258.0 1368 52.6
Gorai.004G269300 Gossypium raimondii HOM05D004277 ORTHO05D005148 0.0e+00 1256.5 1327 54.1
Psat6g100160 Pisum sativum HOM05D004277 ORTHO05D005148 0.0e+00 1256.1 1393 51.8
Solyc12g017280.2 Solanum lycopersicum HOM05D004277 ORTHO05D005148 0.0e+00 1255.4 1410 50.5
Migut.H01674 Erythranthe guttata HOM05D004277 ORTHO05D005148 0.0e+00 1253.4 1373 51.8
Eucgr.F04450 Eucalyptus grandis HOM05D004277 ORTHO05D005148 0.0e+00 1251.5 1373 51.1
Lalb_Chr18g0046601 Lupinus albus HOM05D004277 ORTHO05D005148 0.0e+00 1248.8 1356 53.0
AT1G79190 Arabidopsis thaliana HOM05D004277 ORTHO05D005148 0.0e+00 1248.0 1368 50.7
HanXRQChr03g0078241 Helianthus annuus HOM05D004277 ORTHO05D005148 0.0e+00 1248.0 1353 51.8
Prupe.4G136200 Prunus persica HOM05D004277 ORTHO05D005148 0.0e+00 1243.4 1206 55.6
Aa31LG4G1820 Aethionema arabicum HOM05D004277 ORTHO05D005148 0.0e+00 1241.1 1375 50.4
BcaB05g25178 Brassica carinata HOM05D004277 ORTHO05D005148 0.0e+00 1238.0 1374 50.0
Phvul.003G002100 Phaseolus vulgaris HOM05D004277 ORTHO05D005148 0.0e+00 1235.7 1363 51.8
AL2G39660 Arabidopsis lyrata HOM05D004277 ORTHO05D005148 0.0e+00 1233.8 1365 50.4
MELO3C012612.2 Cucumis melo HOM05D004277 ORTHO05D005148 0.0e+00 1233.8 1373 51.0
Peaxi162Scf00078g01336 Petunia axillaris HOM05D004277 ORTHO05D005148 0.0e+00 1230.7 1474 48.6
Medtr1g038850 Medicago truncatula HOM05D004277 ORTHO05D005148 0.0e+00 1226.5 1383 52.1
ECA240G2290 Erigeron canadensis HOM05D004277 ORTHO05D005148 0.0e+00 1224.9 1357 50.6
THA.LOC104812364 Tarenaya hassleriana HOM05D004277 ORTHO05D005148 0.0e+00 1219.9 1394 50.1
A02p22660 Brassica napus HOM05D004277 ORTHO05D005148 0.0e+00 1196.4 1366 49.9
BcaC03g15873 Brassica carinata HOM05D004277 ORTHO05D005148 0.0e+00 1194.9 1368 49.3
Lsat_1_v5_gn_7_70840 Lactuca sativa HOM05D004277 ORTHO05D005148 0.0e+00 1194.1 1377 50.1
BraA02t07267Z Brassica rapa HOM05D004277 ORTHO05D005148 0.0e+00 1190.6 1368 49.1
BolC2t09641H Brassica oleracea HOM05D004277 ORTHO05D005148 0.0e+00 1189.9 1370 49.3
MBI02_g15959_MAGBIO Magnolia biondii HOM05D004277 ORTHO05D005148 0.0e+00 1179.1 1355 50.1
C02p36270 Brassica napus HOM05D004277 ORTHO05D005148 0.0e+00 1178.7 1368 48.9
DCAR_019921 Daucus carota HOM05D004277 ORTHO05D005148 0.0e+00 1166.8 1341 49.7
VMungo0251G3136 Vigna mungo HOM05D004277 ORTHO05D005148 0.0e+00 1152.9 1361 49.5
ATR0763G037 Amborella trichopoda HOM05D004277 ORTHO05D005148 0.0e+00 1140.6 1376 45.2
Dinv19596 Davidia involucrata HOM05D004277 ORTHO05D005148 0.0e+00 1133.2 1137 55.1
arahy.Tifrunner.gnm1.ann1.J7P8I0 Arachis hypogaea HOM05D004277 ORTHO05D005148 0.0e+00 1116.7 1549 44.2
arahy.Tifrunner.gnm1.ann1.3DGA3E Arachis hypogaea HOM05D004277 ORTHO05D005148 0.0e+00 1109.0 1559 44.1
Zm00001eb224850 Zea mays HOM05D004277 ORTHO05D005148 1.3e-302 1043.9 1374 44.3
Nitab4.5_0000388g0130 Nicotiana tabacum HOM05D004277 ORTHO05D005148 1.3e-294 1017.3 1132 50.6
CDE05G2591 Ceratophyllum demersum HOM05D004277 ORTHO05D005148 6.7e-272 941.8 1157 47.1
Sp5g34240 Schrenkiella parvula HOM05D004277 ORTHO05D005148 2.8e-270 936.4 1049 50.0
MD05G1224200 Malus domestica HOM05D004277 ORTHO05D005148 6.1e-265 918.7 984 52.6
Haze_07825 Corylus avellana HOM05D004277 ORTHO05D005148 2.1e-257 893.6 1017 51.3
unitig_8.g4753 Utricularia gibba HOM05D004277 ORTHO05D005148 1.5e-250 870.9 1321 41.0
Nitab4.5_0009962g0010 Nicotiana tabacum HOM05D004277 ORTHO05D005148 2.3e-248 863.6 1052 48.7
CARHR072840 Cardamine hirsuta HOM05D004277 ORTHO05D005148 3.7e-230 803.1 838 52.3
TAR626G0647 Trochodendron aralioides HOM05D004277 ORTHO05D005148 4.9e-222 776.2 836 52.4
Hma1.2p1_1054F.1_g252470 Hydrangea macrophylla HOM05D004277 ORTHO05D005148 6.6e-219 765.8 711 56.8
Carub.0002s2606 Capsella rubella HOM05D004277 ORTHO05D005148 4.3e-218 763.1 749 54.2
HPP92_021082 Vanilla planifolia HOM05D004277 ORTHO05D005148 5.3e-200 703.0 1336 36.2
Sopen12g008100 Solanum pennellii HOM05D004277 ORTHO05D005148 7.4e-194 682.6 828 48.8
Pp3c22_19900 Physcomitrium patens HOM05D004277 ORTHO05D005148 2.5e-170 604.4 1421 32.9
Mapoly0151s0022 Marchantia polymorpha HOM05D004277 ORTHO05D005148 1.4e-163 582.0 1426 31.4
Sopen12g008110 Solanum pennellii HOM05D004277 ORTHO05D005148 1.4e-157 562.0 519 56.1
TAR626G1109 Trochodendron aralioides HOM05D004277 ORTHO05D005148 2.3e-147 528.1 440 61.8
Thecc.07G167700 Theobroma cacao HOM05D004277 ORTHO05D005148 3.7e-145 520.8 443 61.9
SEGI_00999 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 4.1e-144 517.3 670 43.6
TPR.G35532 Trifolium pratense HOM05D004277 ORTHO05D005148 6.3e-137 493.4 609 49.1
CARHR072830 Cardamine hirsuta HOM05D004277 ORTHO05D005148 9.5e-125 453.0 527 48.4
Carub.0002s2605 Capsella rubella HOM05D004277 ORTHO05D005148 2.1e-124 451.8 532 48.5
Haze_07823 Corylus avellana HOM05D004277 ORTHO05D005148 5.8e-122 443.7 337 65.6
Cpa.g.sc34.11 Carica papaya HOM05D004277 ORTHO05D005148 2.0e-119 435.3 397 57.2
AagrBONN_evm.TU.Sc2ySwM_228.3209 Anthoceros agrestis HOM05D004277 ORTHO05D005148 3.3e-117 427.9 1024 32.2
SEGI_07420 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 1.2e-98 366.3 478 42.1
Nitab4.5_0009962g0020 Nicotiana tabacum HOM05D004277 ORTHO05D005148 1.1e-91 343.2 275 62.2
Cc00_g15170 Coffea canephora HOM05D004277 ORTHO05D005148 4.6e-79 301.2 548 38.3
SEGI_33780 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 2.5e-72 278.9 435 42.8
Cc03_g14950 Coffea canephora HOM05D004277 ORTHO05D005148 7.1e-72 277.3 754 30.0
Thecc.07G167800 Theobroma cacao HOM05D004277 ORTHO05D005148 2.0e-66 259.2 355 45.1
MELO3C008303.2 Cucumis melo HOM05D004277 ORTHO05D005148 5.0e-65 254.6 375 43.2
SEGI_06167 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 6.9e-59 234.2 450 36.9
MD10G1205800 Malus domestica HOM05D004277 ORTHO05D005148 7.4e-53 214.2 230 53.0
MELO3C025974.2 Cucumis melo HOM05D004277 ORTHO05D005148 2.6e-50 205.7 157 65.6
Actinidia09631 Actinidia chinensis HOM05D004277 ORTHO05D005148 5.9e-50 204.5 138 74.6
SEGI_16544 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 7.7e-50 204.1 319 42.3
MSTRG.12674 Avicennia marina HOM05D004277 ORTHO05D005148 3.6e-47 195.3 151 67.5
Cpa.g.sc34.4 Carica papaya HOM05D004277 ORTHO05D005148 2.0e-45 189.5 176 58.0
MD05G1224300 Malus domestica HOM05D004277 ORTHO05D005148 3.3e-45 188.7 145 64.8
TPR.G34228 Trifolium pratense HOM05D004277 ORTHO05D005148 1.8e-43 183.0 382 38.0
Os10g0575800 Oryza sativa ssp. japonica HOM05D004277 ORTHO05D005148 9.1e-43 180.6 216 50.5
Zm00001eb146320 Zea mays HOM05D004277 ORTHO05D005148 1.5e-40 173.3 212 45.8
Cpa.g.sc34.5 Carica papaya HOM05D004277 ORTHO05D005148 8.0e-39 167.5 198 49.0
TAR624G0115 Trochodendron aralioides HOM05D004277 ORTHO05D005148 6.7e-38 164.5 178 50.0
TPR.G40005 Trifolium pratense HOM05D004277 ORTHO05D005148 1.1e-37 163.7 139 60.4
CBR_g39747 Chara braunii HOM05D004277 ORTHO05D005148 6.3e-36 157.9 682 24.9
MCO13G561 Micromonas commoda HOM05D004277 ORTHO05D005148 1.8e-30 139.8 1204 22.5
BcaB02g08672 Brassica carinata HOM05D004277 ORTHO05D005148 5.2e-30 138.3 162 49.4
PSO478G2881 Papaver somniferum HOM05D004277 ORTHO05D005148 9.8e-29 134.0 217 43.3
PRCOL_00003205 Prasinoderma coloniale HOM05D004277 ORTHO05D005148 2.2e-28 132.9 1222 23.2
Zm00001eb372650 Zea mays HOM05D004277 ORTHO05D005148 2.8e-28 132.5 212 39.6
SHI21617 Sapria himalayana HOM05D004277 ORTHO05D005148 7.0e-27 127.9 133 49.6
Zm00001eb060300 Zea mays HOM05D004277 ORTHO05D005148 3.8e-25 122.1 138 46.4
CBR_g39748 Chara braunii HOM05D004277 ORTHO05D005148 3.4e-21 109.0 352 28.1
CDE05G3501 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 2.8e-20 105.9 97 56.7
MD10G1205500 Malus domestica HOM05D004277 ORTHO05D005148 8.3e-20 104.4 100 53.0
SHI21614 Sapria himalayana HOM05D004277 ORTHO05D005148 1.1e-19 104.0 171 38.0
Cpa.g.sc34.6 Carica papaya HOM05D004277 ORTHO05D005148 1.8e-19 103.2 84 61.9
TPR.G23191 Trifolium pratense HOM05D003498 ORTHO05D005148 2.4e-19 102.8 208 38.5
MELO3C029569.2 Cucumis melo HOM05D004277 ORTHO05D005148 2.0e-18 99.8 77 61.0
Actinidia07382 Actinidia chinensis HOM05D004277 ORTHO05D005148 7.7e-18 97.8 221 35.7
Cre01.g039600 Chlamydomonas reinhardtii HOM05D004277 ORTHO05D005148 6.6e-17 94.7 582 23.0
TPR.G28108 Trifolium pratense HOM05D004277 ORTHO05D005148 2.5e-16 92.8 101 51.5
MD10G1205700 Malus domestica HOM05D004277 ORTHO05D005148 3.3e-16 92.4 105 48.6
Zm00001eb269250 Zea mays HOM05D004277 ORTHO05D005148 9.5e-16 90.9 94 46.8
MELO3C027882.2 Cucumis melo HOM05D004277 ORTHO05D005148 2.8e-15 89.4 158 40.5
EL10Ac9g22598 Beta vulgaris HOM05D003688 ORTHO05D004338 6.1e-15 88.2 83 57.8
SHI21613 Sapria himalayana HOM05D004277 ORTHO05D002750 8.0e-15 87.8 115 42.6
Thecc.08G194100 Theobroma cacao HOM05D004277 ORTHO05D005148 1.0e-14 87.4 75 58.7
MD10G1205600 Malus domestica HOM05D004277 ORTHO05D005148 1.4e-14 87.0 61 68.9
Zm00001eb307990 Zea mays HOM05D004277 ORTHO05D005148 8.3e-12 77.8 76 48.7
SEGI_27653 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 5.4e-11 75.1 117 40.2
TPR.G17466 Trifolium pratense HOM05D004277 ORTHO05D005148 5.4e-11 75.1 80 53.8
Hma1.2p1_0148F.1_g065920 Hydrangea macrophylla HOM05D001726 ORTHO05D001761 3.5e-10 72.4 92 44.6
Zm00001eb307980 Zea mays HOM05D004277 ORTHO05D005148 1.3e-09 70.5 101 44.6
Zm00001eb086610 Zea mays HOM05D004277 ORTHO05D005148 5.0e-09 68.6 101 44.6
FAN06G0062 Fragaria x ananassa HOM05D016453 ORTHO05D017011 1.5e-08 67.0 142 35.9
FAN12G1216 Fragaria x ananassa HOM05D016453 ORTHO05D017011 3.3e-08 65.9 142 35.9
SHI21618 Sapria himalayana HOM05D004277 ORTHO05D005148 6.2e-07 61.6 86 48.8
EL10Ac9g22400 Beta vulgaris HOM05D004277 ORTHO05D005148 1.4e-06 60.5 35 82.9
EL10Ac5g11333 Beta vulgaris HOM05D003278 ORTHO05D003738 4.0e-06 58.9 32 84.4
FvH4_7g12450 Fragaria vesca HOM05D016453 ORTHO05D017011 5.2e-06 58.5 102 40.2
Actinidia07375 Actinidia chinensis HOM05D004277 ORTHO05D005148 8.9e-06 57.8 133 31.6


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