Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 8.9e-162 573.5 289 100.0
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 3.0e-69 266.2 274 54.0
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 4.4e-60 235.7 259 51.0
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 2.7e-54 216.5 274 45.6
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 3.6e-54 216.1 272 46.0
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 1.0e-53 214.5 273 44.3
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 3.0e-53 213.0 275 44.4
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 6.8e-53 211.8 274 44.2
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 1.2e-52 211.1 275 43.3
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 2.0e-52 210.3 275 43.3
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 2.6e-52 209.9 275 42.9
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 3.4e-52 209.5 274 44.5
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 1.3e-51 207.6 273 43.6
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 3.7e-51 206.1 275 42.9
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 3.7e-51 206.1 276 42.8
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 6.3e-51 205.3 273 44.3
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 8.3e-51 204.9 274 43.1
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 8.3e-51 204.9 274 43.1
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 8.3e-51 204.9 274 43.1
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 8.3e-51 204.9 274 44.5
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 1.1e-50 204.5 273 42.5
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 1.1e-50 204.5 274 43.4
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 1.1e-50 204.5 273 43.6
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 1.4e-50 204.1 274 41.6
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 2.4e-50 203.4 276 42.4
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 3.1e-50 203.0 273 42.5
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 5.4e-50 202.2 276 42.0
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 5.4e-50 202.2 276 41.7
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 5.4e-50 202.2 273 42.1
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 9.1e-50 201.4 274 42.3
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 1.2e-49 201.1 275 42.5
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 1.2e-49 201.1 274 42.7
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 1.6e-49 200.7 274 43.1
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.7e-49 199.9 273 44.0
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 3.5e-49 199.5 273 41.4
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 3.5e-49 199.5 273 41.8
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 3.5e-49 199.5 273 41.8
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 4.5e-49 199.1 274 43.4
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 4.5e-49 199.1 273 41.8
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 5.9e-49 198.7 274 43.1
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 7.7e-49 198.4 274 43.8
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 2.3e-48 196.8 273 41.8
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 2.3e-48 196.8 273 41.4
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.8e-48 196.1 273 43.6
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 5.0e-48 195.7 273 42.1
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 8.6e-48 194.9 289 40.8
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 8.6e-48 194.9 274 42.3
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 8.6e-48 194.9 276 43.8
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 1.9e-47 193.7 273 41.8
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 4.2e-47 192.6 273 41.0
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 5.5e-47 192.2 272 40.8
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 5.5e-47 192.2 273 41.8
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 9.5e-47 191.4 273 39.2
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 9.5e-47 191.4 272 40.1
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 1.2e-46 191.0 273 41.8
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 1.6e-46 190.7 273 41.4
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 2.8e-46 189.9 273 40.7
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 2.8e-46 189.9 273 41.8
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 4.7e-46 189.1 273 40.7
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 4.7e-46 189.1 273 41.0
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 4.7e-46 189.1 273 42.1
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 6.1e-46 188.7 272 40.8
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 1.4e-45 187.6 272 40.8
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 3.0e-45 186.4 272 39.7
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 8.9e-45 184.9 273 38.8
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 1.5e-44 184.1 277 40.4
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 2.0e-44 183.7 274 41.2
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 5.7e-44 182.2 274 40.5
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 7.5e-44 181.8 275 41.8
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 7.5e-44 181.8 273 39.6
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 9.8e-44 181.4 273 39.9
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 1.3e-43 181.0 273 40.3
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 1.4e-42 177.6 237 43.9
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 5.4e-42 175.6 273 38.8
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 1.6e-41 174.1 273 38.8
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 2.3e-40 170.2 273 37.0
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 1.1e-39 167.9 272 37.9
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 4.3e-39 166.0 273 37.4
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 1.6e-38 164.1 244 42.6
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 1.6e-38 164.1 272 36.0
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 9.8e-36 154.8 247 39.3
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 9.8e-36 154.8 242 39.7
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 2.2e-35 153.7 273 35.5
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 8.3e-35 151.8 232 41.4
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 8.3e-35 151.8 232 39.2
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 1.3e-32 144.4 232 38.8
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 2.3e-32 143.7 233 37.3
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 3.0e-32 143.3 232 38.4
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 2.1e-30 137.1 231 39.0
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.6e-28 130.2 230 39.6
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 3.4e-28 129.8 97 64.9
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 5.8e-28 129.0 85 69.4
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 1.9e-23 114.0 240 36.7
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 3.4e-20 103.2 94 48.9
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 1.3e-19 101.3 273 28.9
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 1.1e-18 98.2 101 45.5
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.6e-17 94.4 94 55.3
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 4.3e-15 86.3 108 46.3
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 8.1e-14 82.0 282 25.9
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 2.0e-12 77.4 60 58.3
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 5.4e-10 69.3 49 61.2
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 6.6e-08 62.4 64 43.8
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 1.1e-07 61.6 102 32.4
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 2.8e-06 57.0 41 58.5


User provided reference genes

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