Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03254 Beta vulgaris HOM05D000034 ORTHO05D027001 1.6e-115 419.5 219 100.0
EL10Ac9g22401 Beta vulgaris HOM05D000034 ORTHO05D000037 3.6e-54 215.7 160 79.4
EL10Ac4g08431 Beta vulgaris HOM05D000034 ORTHO05D000277 2.5e-52 209.5 166 71.1
EL10Ac8g19887 Beta vulgaris HOM05D000034 ORTHO05D000037 1.5e-49 200.3 163 69.3
EL10Ac2g03169 Beta vulgaris HOM05D000034 ORTHO05D000037 2.1e-46 189.9 127 83.5
EL10Ac4g08596 Beta vulgaris HOM05D000034 ORTHO05D000277 6.1e-46 188.3 168 66.7
AUR62018288 Chenopodium quinoa HOM05D004615 ORTHO05D000062 1.7e-32 143.7 127 61.4
AUR62025908 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.1e-30 136.7 128 59.4
AUR62004373 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.3e-21 106.7 125 52.0
AUR62015464 Chenopodium quinoa HOM05D000034 ORTHO05D027001 8.3e-19 98.2 70 71.4
EL10Ac5g11807 Beta vulgaris HOM05D000034 ORTHO05D012199 5.4e-18 95.5 223 35.0
EL10Ac4g08595 Beta vulgaris HOM05D000034 ORTHO05D000037 3.8e-16 89.4 46 87.0
EL10Ac2g03584 Beta vulgaris HOM05D000034 ORTHO05D000037 2.5e-15 86.7 48 77.1
EL10Ac8g19730 Beta vulgaris HOM05D000034 ORTHO05D000037 2.5e-15 86.7 48 77.1
EL10Ac9g22470 Beta vulgaris HOM05D000034 ORTHO05D000037 2.5e-15 86.7 48 77.1
AUR62004259 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.2e-15 86.3 48 77.1
AUR62015465 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.2e-15 86.3 48 77.1
AUR62017162 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.2e-15 86.3 48 77.1
AUR62040958 Chenopodium quinoa HOM05D000034 ORTHO05D000037 7.2e-15 85.1 48 75.0
EL10Ac4g08430 Beta vulgaris HOM05D000034 ORTHO05D000037 1.2e-14 84.3 45 84.4
EL10Ac9g22472 Beta vulgaris HOM05D000034 ORTHO05D000037 2.1e-14 83.6 48 75.0
Ah.03g144050 Amaranthus hybridus HOM05D000034 ORTHO05D000037 3.6e-14 82.8 48 75.0
AUR62002125 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.6e-14 82.8 48 75.0
AUR62016298 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.6e-14 82.8 48 75.0
AUR62019986 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.6e-14 82.8 48 75.0
AUR62021534 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.6e-14 82.8 48 75.0
AUR62028530 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.6e-14 82.8 48 75.0
AUR62030228 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.6e-14 82.8 48 75.0
AUR62030444 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.6e-14 82.8 48 75.0
AUR62030449 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.6e-14 82.8 48 75.0
AUR62030490 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.6e-14 82.8 48 75.0
AUR62032998 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.6e-14 82.8 48 75.0
AUR62041492 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.6e-14 82.8 48 75.0
AUR62003629 Chenopodium quinoa HOM05D000034 ORTHO05D000037 4.7e-14 82.4 48 75.0
AUR62005499 Chenopodium quinoa HOM05D000034 ORTHO05D000037 4.7e-14 82.4 48 75.0
EL10Ac1g00821 Beta vulgaris HOM05D000034 ORTHO05D000037 6.1e-14 82.0 48 79.2
EL10Ac2g03259 Beta vulgaris HOM05D000034 ORTHO05D000037 8.0e-14 81.6 48 72.9
AUR62014937 Chenopodium quinoa HOM05D000034 ORTHO05D000037 8.0e-14 81.6 48 72.9
AUR62028579 Chenopodium quinoa HOM05D000034 ORTHO05D012199 1.0e-13 81.3 177 31.1
EL10Ac1g01713 Beta vulgaris HOM05D000034 ORTHO05D000037 1.4e-13 80.9 48 72.9
AUR62026394 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.4e-13 80.9 48 72.9
EL10Ac2g03034 Beta vulgaris HOM05D000034 ORTHO05D000037 1.8e-13 80.5 45 82.2
AUR62025061 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.8e-13 80.5 48 72.9
AUR62002626 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.3e-13 80.1 48 72.9
AUR62041010 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.3e-13 80.1 48 72.9
EL10Ac3g06147 Beta vulgaris HOM05D000034 ORTHO05D000037 3.0e-13 79.7 79 57.0
EL10Ac8g20047 Beta vulgaris HOM05D000034 ORTHO05D000037 3.0e-13 79.7 48 77.1
AUR62029263 Chenopodium quinoa HOM05D000034 ORTHO05D000001 3.0e-13 79.7 48 70.8
EL10Ac7g17645 Beta vulgaris HOM05D000034 ORTHO05D000037 5.2e-13 79.0 45 75.6
EL10Ac4g08975 Beta vulgaris HOM05D000034 ORTHO05D000037 6.8e-13 78.6 72 61.1
AUR62037327 Chenopodium quinoa HOM05D000034 ORTHO05D027001 6.8e-13 78.6 61 63.9
EL10Ac4g07655 Beta vulgaris HOM05D000034 ORTHO05D000037 8.8e-13 78.2 48 77.1
EL10Ac7g17711 Beta vulgaris HOM05D000034 ORTHO05D000037 8.8e-13 78.2 47 63.8
Ah.06g189250 Amaranthus hybridus HOM05D000034 ORTHO05D000037 2.6e-12 76.6 46 71.7
Cc04_g15340 Coffea canephora HOM05D000034 ORTHO05D000037 3.4e-12 76.3 45 73.3
Ah.01g005970 Amaranthus hybridus HOM05D000034 ORTHO05D000037 5.7e-12 75.5 46 69.6
Ah.01g007890 Amaranthus hybridus HOM05D000034 ORTHO05D000037 5.7e-12 75.5 46 69.6
Ah.14g083600 Amaranthus hybridus HOM05D000034 ORTHO05D000037 5.7e-12 75.5 46 69.6
ECA232G1280 Erigeron canadensis HOM05D000034 ORTHO05D000037 7.5e-12 75.1 48 68.8
AUR62031342 Chenopodium quinoa HOM05D000034 ORTHO05D000037 9.8e-12 74.7 48 68.8
EL10Ac9g22347 Beta vulgaris HOM05D000034 ORTHO05D000037 1.3e-11 74.3 79 53.2
Cc00_g14280 Coffea canephora HOM05D000034 ORTHO05D000037 1.3e-11 74.3 45 71.1
Cc01_g06830 Coffea canephora HOM05D000034 ORTHO05D000037 1.3e-11 74.3 45 71.1
Cc05_g01170 Coffea canephora HOM05D000034 ORTHO05D000037 1.3e-11 74.3 45 71.1
Cc06_g21160 Coffea canephora HOM05D000034 ORTHO05D000037 1.3e-11 74.3 45 71.1
Cc07_g13120 Coffea canephora HOM05D000034 ORTHO05D000037 1.3e-11 74.3 45 71.1
Cc07_g20310 Coffea canephora HOM05D000034 ORTHO05D000037 1.3e-11 74.3 45 71.1
Cc08_g07920 Coffea canephora HOM05D000034 ORTHO05D000037 1.3e-11 74.3 45 71.1
Cc09_g05330 Coffea canephora HOM05D000034 ORTHO05D000037 1.3e-11 74.3 45 71.1
Cc11_g01740 Coffea canephora HOM05D000034 ORTHO05D000037 1.3e-11 74.3 45 71.1
Cc11_g04210 Coffea canephora HOM05D000034 ORTHO05D000037 1.3e-11 74.3 45 71.1
ECA232G0754 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.3e-11 74.3 48 66.7
ECA232G4677 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.3e-11 74.3 48 66.7
ECA240G1034 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.3e-11 74.3 48 66.7
ECA247G1477 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.7e-11 73.9 48 66.7
EL10Ac5g11589 Beta vulgaris HOM05D000034 ORTHO05D000037 6.3e-11 72.0 48 66.7
Cc02_g20180 Coffea canephora HOM05D000034 ORTHO05D000277 6.3e-11 72.0 45 68.9
Ah.08g223010 Amaranthus hybridus HOM05D000034 ORTHO05D000037 1.4e-10 70.9 46 65.2
EL10Ac7g17215 Beta vulgaris HOM05D000034 ORTHO05D000037 2.4e-10 70.1 45 73.3
EL10Ac3g06861 Beta vulgaris HOM05D000034 ORTHO05D000037 9.2e-10 68.2 37 83.8
EL10Ac5g12423 Beta vulgaris HOM05D000034 ORTHO05D000037 1.2e-09 67.8 48 62.5
EL10Ac3g05874 Beta vulgaris HOM05D000034 ORTHO05D000037 1.6e-09 67.4 49 63.3
EL10Ac5g11016 Beta vulgaris HOM05D000034 ORTHO05D000037 1.6e-09 67.4 49 63.3
EL10Ac5g11800 Beta vulgaris HOM05D000034 ORTHO05D000037 1.6e-09 67.4 49 63.3
Os11g0577650 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000037 1.6e-09 67.4 48 60.4
AUR62013679 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.0e-09 67.0 37 81.1
AUR62034818 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.0e-09 67.0 37 81.1
AUR62029928 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.7e-09 66.6 37 81.1
EL10As4g23459 Beta vulgaris HOM05D000034 ORTHO05D000037 4.5e-09 65.9 37 78.4
EL10Ac4g09071 Beta vulgaris HOM05D000034 ORTHO05D000037 1.0e-08 64.7 37 78.4
AUR62033739 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-08 64.7 37 78.4
Ah.08g221610 Amaranthus hybridus HOM05D000034 ORTHO05D000037 1.3e-08 64.3 45 64.4
Zm00001eb270320 Zea mays HOM05D000034 ORTHO05D000037 1.3e-08 64.3 43 67.4
EL10Ac3g06350 Beta vulgaris HOM05D000034 ORTHO05D000037 1.7e-08 63.9 35 82.9
EL10Ac1g02211 Beta vulgaris HOM05D000034 ORTHO05D000037 3.8e-08 62.8 45 60.0
EL10Ac3g06453 Beta vulgaris HOM05D000034 ORTHO05D000037 3.8e-08 62.8 45 60.0
DCAR_003199 Daucus carota HOM05D000034 ORTHO05D000277 3.8e-08 62.8 174 28.7
PGR142G2711 Punica granatum HOM05D000034 ORTHO05D000037 6.6e-08 62.0 72 45.8
DCAR_008359 Daucus carota HOM05D000034 ORTHO05D000277 8.6e-08 61.6 174 28.7
CANSAT35G1188 Cannabis sativa HOM05D000034 ORTHO05D000037 1.5e-07 60.8 67 43.3
FvH4_1g08720 Fragaria vesca HOM05D000034 ORTHO05D000037 1.5e-07 60.8 45 62.2
AUR62043041 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.9e-07 60.5 61 57.4
Medtr4g117940 Medicago truncatula HOM05D000034 ORTHO05D000037 1.9e-07 60.5 45 62.2
EL10Ac4g09065 Beta vulgaris HOM05D000034 ORTHO05D000037 2.5e-07 60.1 45 55.6
Hma1.2p1_0203F.1_g086660 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-07 60.1 45 60.0
Hma1.2p1_0232F.1_g097920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-07 60.1 45 60.0
Hma1.2p1_0480F.1_g161830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-07 60.1 45 60.0
Hma1.2p1_0570F.1_g180550 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-07 60.1 45 60.0
Hma1.2p1_0587F.1_g184020 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-07 60.1 45 60.0
Hma1.2p1_0633F.1_g192570 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-07 60.1 45 60.0
Hma1.2p1_0710F.1_g207480 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-07 60.1 45 60.0
Hma1.2p1_1276F.1_g272080 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-07 60.1 45 60.0
Hma1.2p1_1988F.1_g310165 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-07 60.1 45 60.0
Hma1.2p1_2373F.1_g320860 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-07 60.1 45 60.0
Hma1.2p1_3468F.1_g336170 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-07 60.1 45 60.0
EL10Ac8g19400 Beta vulgaris HOM05D000034 ORTHO05D000037 3.3e-07 59.7 45 57.8
FvH4_5g36381 Fragaria vesca HOM05D000034 ORTHO05D000037 3.3e-07 59.7 45 60.0
Hma1.2p1_2244F.1_g317920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.3e-07 59.7 45 57.8
RcHm_v2.0_Chr6g0300321 Rosa chinensis HOM05D000034 ORTHO05D000037 3.3e-07 59.7 44 56.8
FvH4_4g11701 Fragaria vesca HOM05D000034 ORTHO05D000037 4.3e-07 59.3 45 60.0
PSO832G3021 Papaver somniferum HOM05D000034 ORTHO05D000037 4.3e-07 59.3 59 44.1
Psat5g272440 Pisum sativum HOM05D000034 ORTHO05D000037 4.3e-07 59.3 45 57.8
AUR62033845 Chenopodium quinoa HOM05D000034 ORTHO05D000037 5.6e-07 58.9 32 81.2
Hma1.2p1_0982F.1_g243760 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.6e-07 58.9 45 57.8
PSO210G2505 Papaver somniferum HOM05D000034 ORTHO05D000037 5.6e-07 58.9 59 44.1
Atru.chr12.1966 Acer truncatum HOM05D000034 ORTHO05D000037 7.3e-07 58.5 45 55.6
EL10Ac2g03869 Beta vulgaris HOM05D000034 ORTHO05D000277 7.3e-07 58.5 43 76.7
EL10Ac3g06576 Beta vulgaris HOM05D000034 ORTHO05D000037 7.3e-07 58.5 37 73.0
Hma1.2p1_1018F.1_g248390 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.3e-07 58.5 45 57.8
Hma1.2p1_1839F.1_g304890 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.3e-07 58.5 45 60.0
Hma1.2p1_2228F.1_g317520 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.3e-07 58.5 45 57.8
Atru.chr6.37 Acer truncatum HOM05D000034 ORTHO05D000037 9.5e-07 58.2 48 56.2
Hma1.2p1_0325F.1_g126110 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.5e-07 58.2 44 59.1
Hma1.2p1_0601F.1_g187150 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.5e-07 58.2 45 57.8
Cc06_g08990 Coffea canephora HOM05D000034 ORTHO05D000037 1.2e-06 57.8 45 55.6
EL10Ac9g22375 Beta vulgaris HOM05D000034 ORTHO05D000037 1.6e-06 57.4 45 51.1
AUR62015187 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.6e-06 57.4 43 58.1
AUR62044274 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.6e-06 57.4 43 58.1
MELO3C030847.2 Cucumis melo HOM05D000034 ORTHO05D000037 2.8e-06 56.6 45 55.6
PSO675G3081 Papaver somniferum HOM05D000034 ORTHO05D000037 2.8e-06 56.6 59 42.4
PSO017G6258 Papaver somniferum HOM05D000034 ORTHO05D000037 3.6e-06 56.2 48 50.0
PSO063G7234 Papaver somniferum HOM05D000034 ORTHO05D000037 3.6e-06 56.2 48 50.0
PSO170G1448 Papaver somniferum HOM05D000034 ORTHO05D000037 3.6e-06 56.2 48 50.0
MELO3C033358.2 Cucumis melo HOM05D000034 ORTHO05D000037 6.1e-06 55.5 60 45.0
Hma1.2p1_0170F.1_g075450 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.1e-06 55.5 44 54.5
Hma1.2p1_0416F.1_g148500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.1e-06 55.5 45 55.6
arahy.Tifrunner.gnm1.ann1.NQ7VB5 Arachis hypogaea HOM05D000034 ORTHO05D000037 8.0e-06 55.1 45 53.3
EL10Ac9g21126 Beta vulgaris HOM05D000034 ORTHO05D000037 8.0e-06 55.1 132 33.3
MELO3C027743.2 Cucumis melo HOM05D001651 ORTHO05D009716 8.0e-06 55.1 45 55.6
MELO3C032769.2 Cucumis melo HOM05D000034 ORTHO05D000037 8.0e-06 55.1 45 55.6
Solyc02g150109.1 Solanum lycopersicum HOM05D000034 ORTHO05D000037 8.0e-06 55.1 46 54.3
Sopen02g014140 Solanum pennellii HOM05D000034 ORTHO05D000037 8.0e-06 55.1 46 54.3
Sopen07g025790 Solanum pennellii HOM05D000034 ORTHO05D000037 8.0e-06 55.1 46 54.3
Sopen09g033840 Solanum pennellii HOM05D000034 ORTHO05D000037 8.0e-06 55.1 46 54.3


User provided reference genes

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