Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03084 Beta vulgaris HOM05D006982 ORTHO05D008909 2.7e-97 358.6 176 100.0
AUR62042567 Chenopodium quinoa HOM05D006982 ORTHO05D008909 4.0e-80 301.6 175 85.1
Dinv11484 Davidia involucrata HOM05D006982 ORTHO05D008909 4.7e-65 251.5 177 68.9
Sc11g0004740 Simmondsia chinensis HOM05D006982 ORTHO05D008909 1.4e-64 250.0 161 75.2
TPR.G26172 Trifolium pratense HOM05D006982 ORTHO05D008909 3.0e-64 248.8 169 69.2
Glyma.13G058700 Glycine max HOM05D006982 ORTHO05D008909 5.2e-64 248.1 171 70.8
Lj2g0023544 Lotus japonicus HOM05D006982 ORTHO05D008909 6.8e-64 247.7 171 67.3
VMungo0464G0061 Vigna mungo HOM05D006982 ORTHO05D008909 1.2e-63 246.9 170 69.4
Phvul.004G033900 Phaseolus vulgaris HOM05D006982 ORTHO05D008909 1.5e-63 246.5 170 68.8
Atru.chr8.390 Acer truncatum HOM05D006982 ORTHO05D008909 7.5e-63 244.2 152 73.7
Hma1.2p1_1813F.1_g303760 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 1.3e-62 243.4 178 65.2
Hma1.2p1_3044F.1_g332060 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 1.7e-62 243.0 178 65.2
Psat1g070160 Pisum sativum HOM05D006982 ORTHO05D008909 1.7e-62 243.0 170 67.6
Duzib187G0332 Durio zibethinus HOM05D006982 ORTHO05D008909 4.9e-62 241.5 174 64.9
Nn4g23351 Nelumbo nucifera HOM05D006982 ORTHO05D008909 4.9e-62 241.5 157 73.2
GSVIVG01011493001 Vitis vinifera HOM05D006982 ORTHO05D008909 6.3e-62 241.1 173 67.1
Nitab4.5_0005196g0040 Nicotiana tabacum HOM05D006982 ORTHO05D008909 8.3e-62 240.7 168 66.1
HanXRQChr07g0199461 Helianthus annuus HOM05D006982 ORTHO05D008909 3.1e-61 238.8 150 73.3
Haze_14468 Corylus avellana HOM05D006982 ORTHO05D008909 4.1e-61 238.4 174 66.1
Rhsim10G0045300 Rhododendron simsii HOM05D006982 ORTHO05D008909 4.1e-61 238.4 148 75.0
Sp2g17880 Schrenkiella parvula HOM05D006982 ORTHO05D008909 4.1e-61 238.4 166 68.1
Potri.017G090400 Populus trichocarpa HOM05D006982 ORTHO05D008909 7.0e-61 237.7 165 70.3
QL02p039506 Quercus lobata HOM05D006982 ORTHO05D008909 7.0e-61 237.7 166 69.3
CiPaw.03G091200 Carya illinoinensis HOM05D006982 ORTHO05D008909 9.2e-61 237.3 164 69.5
Thhalv10005014m.g Eutrema salsugineum HOM05D006982 ORTHO05D008909 9.2e-61 237.3 166 67.5
Nitab4.5_0001637g0060 Nicotiana tabacum HOM05D006982 ORTHO05D008909 1.2e-60 236.9 167 65.3
Glyma.19G027800 Glycine max HOM05D006982 ORTHO05D008909 1.6e-60 236.5 165 68.5
Ciclev10012958m.g Citrus clementina HOM05D006982 ORTHO05D008909 2.0e-60 236.1 159 69.8
A06p40000 Brassica napus HOM05D006982 ORTHO05D008909 2.7e-60 235.7 153 73.2
BolC7t44339H Brassica oleracea HOM05D006982 ORTHO05D008909 2.7e-60 235.7 164 67.1
Carub.0005s0799 Capsella rubella HOM05D006982 ORTHO05D008909 2.7e-60 235.7 169 67.5
CANSAT64G0008 Cannabis sativa HOM05D006982 ORTHO05D008909 4.5e-60 235.0 170 64.7
Eucgr.I01983 Eucalyptus grandis HOM05D006982 ORTHO05D008909 4.5e-60 235.0 161 70.2
AL5G19280 Arabidopsis lyrata HOM05D006982 ORTHO05D008909 7.8e-60 234.2 169 67.5
Aa31LG2G3980 Aethionema arabicum HOM05D006982 ORTHO05D008909 1.0e-59 233.8 165 66.1
AT3G29280 Arabidopsis thaliana HOM05D006982 ORTHO05D008909 1.3e-59 233.4 164 68.3
A02p36510 Brassica napus HOM05D006982 ORTHO05D008909 1.3e-59 233.4 160 68.8
BraA02t08647Z Brassica rapa HOM05D006982 ORTHO05D008909 1.3e-59 233.4 160 68.8
Manes.01G098700 Manihot esculenta HOM05D006982 ORTHO05D008909 1.7e-59 233.0 164 68.3
Thecc.04G091200 Theobroma cacao HOM05D006982 ORTHO05D008909 1.7e-59 233.0 174 64.4
Lalb_Chr02g0159031 Lupinus albus HOM05D006982 ORTHO05D008909 2.9e-59 232.3 171 66.7
CARHR292480 Cardamine hirsuta HOM05D006982 ORTHO05D008909 5.0e-59 231.5 171 66.1
MSTRG.3019 Avicennia marina HOM05D006982 ORTHO05D008909 8.6e-59 230.7 170 65.3
BcaB07g30087 Brassica carinata HOM05D006982 ORTHO05D008909 8.6e-59 230.7 166 66.3
Sopen03g016600 Solanum pennellii HOM05D006982 ORTHO05D008909 8.6e-59 230.7 168 61.3
TAR629G3328 Trochodendron aralioides HOM05D006982 ORTHO05D008909 1.1e-58 230.3 163 66.3
vmacro05662 Vaccinium macrocarpon HOM05D006982 ORTHO05D008909 1.1e-58 230.3 155 69.7
C02p55480 Brassica napus HOM05D006982 ORTHO05D008909 1.5e-58 229.9 161 68.9
BolC2t11604H Brassica oleracea HOM05D006982 ORTHO05D008909 1.5e-58 229.9 161 68.9
CAN.G734.5 Capsicum annuum HOM05D006982 ORTHO05D008909 1.9e-58 229.6 167 63.5
Hund13166 Selenicereus undatus HOM05D006982 ORTHO05D008909 2.5e-58 229.2 174 67.2
Solyc03g013250.4 Solanum lycopersicum HOM05D006982 ORTHO05D008909 2.5e-58 229.2 161 63.4
ECA238G0675 Erigeron canadensis HOM05D006982 ORTHO05D008909 3.3e-58 228.8 161 67.1
FvH4_6g47420 Fragaria vesca HOM05D006982 ORTHO05D008909 3.3e-58 228.8 164 65.9
FAN14G3321 Fragaria x ananassa HOM05D006982 ORTHO05D008909 3.3e-58 228.8 164 65.9
THA.LOC104805498 Tarenaya hassleriana HOM05D006982 ORTHO05D008909 3.3e-58 228.8 167 64.7
Ah.10g031970 Amaranthus hybridus HOM05D006982 ORTHO05D008909 4.3e-58 228.4 181 66.3
Gohir.D09G010400 Gossypium hirsutum HOM05D006982 ORTHO05D008909 5.6e-58 228.0 173 63.6
Gorai.006G012000 Gossypium raimondii HOM05D006982 ORTHO05D008909 5.6e-58 228.0 159 67.3
Lsat_1_v5_gn_2_87800 Lactuca sativa HOM05D006982 ORTHO05D008909 5.6e-58 228.0 152 69.7
BcaC03g17569 Brassica carinata HOM05D006982 ORTHO05D008909 1.2e-57 226.9 166 65.7
CsaV3_3G026330 Cucumis sativus L. HOM05D006982 ORTHO05D008909 1.6e-57 226.5 152 67.8
FAN09G4389 Fragaria x ananassa HOM05D006982 ORTHO05D008909 1.6e-57 226.5 164 64.6
SGA_v2.0_scaffold4G02409 Striga asiatica HOM05D006982 ORTHO05D008909 1.6e-57 226.5 176 60.8
MELO3C014935.2 Cucumis melo HOM05D006982 ORTHO05D008909 2.1e-57 226.1 152 67.8
Aqoxy3G00454 Aquilegia oxysepala HOM05D006982 ORTHO05D008909 2.8e-57 225.7 160 68.8
PGR004G0184 Punica granatum HOM05D006982 ORTHO05D008909 2.8e-57 225.7 155 68.4
RcHm_v2.0_Chr2g0166501 Rosa chinensis HOM05D006982 ORTHO05D008909 2.8e-57 225.7 164 65.2
TWI60G0050 Tripterygium wilfordii HOM05D006982 ORTHO05D008909 6.1e-57 224.6 171 67.3
Cc07_g04010 Coffea canephora HOM05D006982 ORTHO05D008909 8.0e-57 224.2 173 65.3
RcHm_v2.0_Chr2g0166491 Rosa chinensis HOM05D006982 ORTHO05D008909 1.8e-56 223.0 168 63.1
Sed0004734 Sechium edule HOM05D006982 ORTHO05D008909 1.8e-56 223.0 152 67.1
FAN02G3418 Fragaria x ananassa HOM05D006982 ORTHO05D008909 2.3e-56 222.6 164 64.6
Actinidia07827 Actinidia chinensis HOM05D006982 ORTHO05D008909 3.0e-56 222.2 149 69.8
ClCG05G014130 Citrullus lanatus HOM05D006982 ORTHO05D008909 3.0e-56 222.2 152 65.8
ATR0064G116 Amborella trichopoda HOM05D006982 ORTHO05D008909 5.2e-56 221.5 160 66.2
MD09G1061600 Malus domestica HOM05D006982 ORTHO05D008909 8.9e-56 220.7 154 65.6
Os03g0257000 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 8.9e-56 220.7 171 60.2
Migut.H00650 Erythranthe guttata HOM05D006982 ORTHO05D008909 1.5e-55 219.9 172 63.4
BraA06t26915Z Brassica rapa HOM05D006982 ORTHO05D008909 3.4e-55 218.8 134 76.9
Cpa.g.sc14.148 Carica papaya HOM05D006982 ORTHO05D008909 3.4e-55 218.8 151 68.9
Os03g0209700 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 1.3e-54 216.9 157 63.7
PSO017G1487 Papaver somniferum HOM05D006982 ORTHO05D008909 1.7e-54 216.5 159 66.7
SalBow1G5236 Salvia bowleyana HOM05D006982 ORTHO05D008909 4.9e-54 214.9 174 59.8
Zm00001eb011170 Zea mays HOM05D006982 ORTHO05D008909 1.1e-53 213.8 157 61.1
PSO478G0313 Papaver somniferum HOM05D006982 ORTHO05D008909 1.4e-53 213.4 160 66.2
Prupe.3G258600 Prunus persica HOM05D006982 ORTHO05D008909 4.1e-53 211.8 178 60.7
Sabra17G0079600 Salix brachista HOM05D006982 ORTHO05D008909 4.1e-53 211.8 151 68.9
SEGI_41437 Sequoiadendron giganteum HOM05D006982 ORTHO05D008909 1.4e-48 196.8 162 57.4
Gohir.A09G011401 Gossypium hirsutum HOM05D006982 ORTHO05D008909 4.0e-48 195.3 193 54.4
CDE04G2259 Ceratophyllum demersum HOM05D006982 ORTHO05D008909 2.4e-45 186.0 124 69.4
Pp3c21_18720 Physcomitrium patens HOM05D006982 ORTHO05D008909 3.2e-45 185.7 158 56.3
Peaxi162Scf00451g00425 Petunia axillaris HOM05D006982 ORTHO05D008909 2.0e-44 183.0 168 58.9
SMO164G0193 Selaginella moellendorffii HOM05D006982 ORTHO05D008909 2.0e-44 183.0 152 55.9
Medtr6g013815 Medicago truncatula HOM05D006982 ORTHO05D008909 1.0e-43 180.6 126 69.0
Lj4A116T80 Lonicera japonica HOM05D006982 ORTHO05D008909 3.0e-43 179.1 129 68.2
COL.COLO4_21380 Corchorus olitorius HOM05D006982 ORTHO05D008909 3.9e-43 178.7 128 64.8
BolC2t11598H Brassica oleracea HOM05D006982 ORTHO05D008909 1.2e-41 173.7 129 65.9
arahy.Tifrunner.gnm1.ann1.NGZQ86 Arachis hypogaea HOM05D006982 ORTHO05D008909 1.7e-38 163.3 159 50.3
arahy.Tifrunner.gnm1.ann1.84WVAW Arachis hypogaea HOM05D006982 ORTHO05D008909 1.2e-36 157.1 160 51.9
unitig_899.g15159 Utricularia gibba HOM05D006982 ORTHO05D008909 1.7e-35 153.3 147 54.4
C07p38170 Brassica napus HOM05D006982 ORTHO05D008909 3.4e-31 139.0 98 66.3
FAN05G3993 Fragaria x ananassa HOM05D006982 ORTHO05D008909 3.4e-31 139.0 101 67.3
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-29 131.7 92 64.1
CSS0035536 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 2.8e-25 119.4 77 72.7
C02p55410 Brassica napus HOM05D006982 ORTHO05D008909 4.4e-23 112.1 111 53.2
TPR.G3955 Trifolium pratense HOM05D006982 ORTHO05D008909 4.9e-22 108.6 71 70.4
AUR62018155 Chenopodium quinoa HOM05D006982 ORTHO05D008909 4.8e-17 92.0 63 71.4
AUR62006323 Chenopodium quinoa HOM05D003441 ORTHO05D044017 1.9e-13 80.1 62 67.7
CSS0038093 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 7.4e-10 68.2 46 71.7
Medtr6g013805 Medicago truncatula HOM05D006982 ORTHO05D008909 6.2e-09 65.1 51 60.8
PGSC0003DMG400033554 Solanum tuberosum HOM05D006982 ORTHO05D008909 8.1e-09 64.7 42 66.7
Lj4A116T81 Lonicera japonica HOM05D006982 ORTHO05D008909 4.0e-08 62.4 53 54.7
SHI03749 Sapria himalayana HOM05D006982 ORTHO05D000001 1.3e-06 57.4 42 54.8


User provided reference genes

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