Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 1.4e-90 336.3 168 100.0
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 1.3e-43 180.3 96 95.8
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 1.3e-40 170.2 102 85.3
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 2.9e-40 169.1 96 89.6
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 2.9e-40 169.1 96 88.5
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 3.8e-40 168.7 104 84.6
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 5.0e-40 168.3 96 88.5
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 6.5e-40 167.9 96 88.5
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 6.5e-40 167.9 96 88.5
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 1.1e-39 167.2 96 88.5
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 1.5e-39 166.8 96 87.5
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.5e-39 166.8 96 87.5
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.5e-39 166.8 96 87.5
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 1.5e-39 166.8 96 88.5
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 1.9e-39 166.4 96 87.5
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 1.9e-39 166.4 96 88.5
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 1.9e-39 166.4 96 87.5
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 1.9e-39 166.4 96 87.5
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 1.9e-39 166.4 96 87.5
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.9e-39 166.4 96 88.5
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 2.5e-39 166.0 96 88.5
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 2.5e-39 166.0 96 88.5
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 2.5e-39 166.0 96 87.5
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 2.5e-39 166.0 96 87.5
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 2.5e-39 166.0 96 87.5
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 3.2e-39 165.6 96 86.5
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 3.2e-39 165.6 96 86.5
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 3.2e-39 165.6 96 86.5
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 4.2e-39 165.2 96 86.5
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 4.2e-39 165.2 96 86.5
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 5.5e-39 164.9 96 86.5
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 5.5e-39 164.9 92 89.1
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 5.5e-39 164.9 96 87.5
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 7.2e-39 164.5 96 86.5
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 7.2e-39 164.5 96 86.5
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 7.2e-39 164.5 96 85.4
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 7.2e-39 164.5 96 85.4
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 9.4e-39 164.1 96 87.5
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 9.4e-39 164.1 99 84.8
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 9.4e-39 164.1 92 89.1
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 9.4e-39 164.1 92 89.1
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.2e-38 163.7 92 90.2
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 1.2e-38 163.7 96 86.5
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 1.6e-38 163.3 96 86.5
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.6e-38 163.3 93 88.2
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 1.6e-38 163.3 93 88.2
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 1.6e-38 163.3 96 86.5
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 1.6e-38 163.3 96 86.5
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 1.6e-38 163.3 96 86.5
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.1e-38 162.9 92 90.2
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.1e-38 162.9 92 90.2
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 2.1e-38 162.9 90 91.1
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 2.1e-38 162.9 96 84.4
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 2.7e-38 162.5 96 85.4
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 2.7e-38 162.5 92 89.1
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 2.7e-38 162.5 96 84.4
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 2.7e-38 162.5 96 86.5
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 2.7e-38 162.5 96 85.4
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 4.7e-38 161.8 96 84.4
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 4.7e-38 161.8 98 83.7
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 4.7e-38 161.8 92 87.0
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 6.1e-38 161.4 96 85.4
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 6.1e-38 161.4 93 87.1
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 6.1e-38 161.4 96 85.4
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 6.1e-38 161.4 93 86.0
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 6.1e-38 161.4 96 84.4
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 8.0e-38 161.0 96 85.4
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 1.4e-37 160.2 90 88.9
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 1.8e-37 159.8 96 85.4
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 1.8e-37 159.8 96 85.4
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 1.8e-37 159.8 96 84.4
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 3.0e-37 159.1 96 83.3
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 3.0e-37 159.1 90 87.8
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 3.0e-37 159.1 96 84.4
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 4.0e-37 158.7 93 83.9
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 5.2e-37 158.3 92 85.9
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 1.1e-36 157.1 93 84.9
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 1.5e-36 156.8 93 86.0
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 1.3e-35 153.7 92 83.7
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 1.7e-35 153.3 95 81.1
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 1.7e-35 153.3 96 80.2
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 2.2e-35 152.9 96 82.3
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 3.7e-35 152.1 96 81.2
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 6.3e-35 151.4 96 81.2
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 6.3e-35 151.4 100 75.0
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 8.2e-35 151.0 96 81.2
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 1.4e-34 150.2 96 80.2
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 1.4e-34 150.2 96 80.2
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 1.8e-34 149.8 96 79.2
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 2.4e-34 149.4 96 80.2
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 2.4e-34 149.4 96 80.2
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 2.4e-34 149.4 96 80.2
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 4.1e-34 148.7 96 81.2
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 2.0e-33 146.4 96 79.2
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 5.9e-33 144.8 104 74.0
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 2.5e-31 139.4 81 84.0
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 4.2e-31 138.7 93 74.2
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 5.5e-31 138.3 96 68.8
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 3.6e-30 135.6 93 71.0
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 4.4e-28 128.6 91 75.8
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 9.8e-28 127.5 91 65.9
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 1.3e-27 127.1 84 76.2
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 3.7e-27 125.6 77 79.2
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 1.2e-25 120.6 94 67.0
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 3.8e-24 115.5 92 69.6
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.9e-23 113.2 106 64.2
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.5e-20 103.6 96 61.5
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 2.0e-17 93.2 96 57.3
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.5e-15 87.0 59 72.9
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 3.6e-14 82.4 44 95.5
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 2.6e-12 76.3 45 82.2
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 2.6e-12 76.3 45 82.2
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 4.4e-12 75.5 99 39.4
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 2.2e-11 73.2 54 72.2
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 2.7e-09 66.2 41 80.5
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 2.3e-08 63.2 37 83.8
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.2e-06 57.4 108 38.9


User provided reference genes

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