Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 2.3e-265 918.3 455 100.0
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 2.4e-230 802.0 456 87.7
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 1.7e-212 742.7 457 81.0
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 6.6e-212 740.7 451 83.4
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.9e-211 739.2 448 82.6
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.9e-211 739.2 447 83.0
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 4.3e-211 738.0 463 81.9
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 7.3e-211 737.3 452 81.9
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 9.5e-211 736.9 451 82.0
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 1.6e-210 736.1 448 82.6
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 3.6e-210 734.9 434 84.6
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 4.7e-210 734.6 452 81.9
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 6.2e-210 734.2 452 81.9
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 3.1e-209 731.9 448 81.0
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 5.2e-209 731.1 446 82.3
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 6.8e-209 730.7 452 81.2
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 1.2e-208 729.9 456 81.1
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 2.0e-208 729.2 462 81.0
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 5.8e-208 727.6 450 82.0
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 7.5e-208 727.2 466 78.5
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 9.9e-208 726.9 451 81.4
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 1.7e-207 726.1 449 80.8
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 1.7e-207 726.1 462 80.1
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.2e-207 725.7 451 82.3
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.9e-207 725.3 451 82.0
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 2.9e-207 725.3 448 80.8
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 4.9e-207 724.5 444 81.8
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 6.4e-207 724.2 471 77.9
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 8.3e-207 723.8 448 80.4
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 1.1e-206 723.4 457 79.4
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 5.4e-206 721.1 448 80.8
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 7.1e-206 720.7 459 78.9
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 1.6e-205 719.5 424 84.7
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 2.1e-205 719.2 455 80.4
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 2.7e-205 718.8 466 77.9
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 6.0e-205 717.6 448 80.1
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 7.8e-205 717.2 413 85.5
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 1.0e-204 716.8 456 79.4
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 1.7e-204 716.1 452 78.8
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 1.7e-204 716.1 448 79.7
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 1.7e-204 716.1 455 80.0
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 1.7e-204 716.1 449 80.0
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 3.9e-204 714.9 448 79.2
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 1.1e-203 713.4 454 79.3
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 1.5e-203 713.0 448 78.6
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 1.5e-203 713.0 454 79.1
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 1.9e-203 712.6 447 80.1
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 4.3e-203 711.4 454 78.9
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 4.3e-203 711.4 468 78.8
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 5.6e-203 711.1 412 84.2
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 7.3e-203 710.7 464 78.4
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 1.6e-202 709.5 464 78.2
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 1.6e-202 709.5 453 78.6
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 2.1e-202 709.1 449 80.0
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 3.6e-202 708.4 412 84.5
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 6.2e-202 707.6 456 78.9
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 1.8e-201 706.1 433 80.4
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 6.8e-201 704.1 406 84.7
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 1.2e-200 703.4 445 78.7
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 2.6e-200 702.2 459 78.6
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 7.6e-200 700.7 449 78.2
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 2.2e-199 699.1 449 78.0
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 2.9e-199 698.7 442 78.5
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 4.9e-199 698.0 396 85.4
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 4.9e-199 698.0 455 76.9
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 6.4e-199 697.6 444 78.2
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 2.4e-198 695.7 396 84.8
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 4.1e-198 694.9 512 70.7
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 5.4e-198 694.5 429 81.4
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 9.2e-198 693.7 384 87.5
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 9.2e-198 693.7 452 77.7
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 5.1e-196 688.0 403 84.6
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 3.3e-195 685.3 386 86.3
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 3.3e-195 685.3 458 76.4
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 4.3e-195 684.9 386 86.3
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 4.7e-194 681.4 470 75.5
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 6.2e-194 681.0 411 82.2
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 8.1e-194 680.6 449 76.6
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 1.1e-193 680.2 411 82.2
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 2.4e-193 679.1 440 76.8
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 1.7e-191 672.9 362 90.6
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 9.3e-190 667.2 461 73.8
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 1.3e-188 663.3 406 79.6
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 5.1e-188 661.4 356 90.4
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 4.0e-185 651.7 462 73.4
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 4.0e-185 651.7 370 85.1
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 5.8e-184 647.9 452 74.6
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 1.1e-182 643.7 447 76.1
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 3.7e-178 628.6 386 80.6
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.4e-174 616.7 358 86.6
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 1.9e-174 616.3 332 90.4
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 3.2e-174 615.5 332 90.4
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 1.6e-173 613.2 380 77.1
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 6.0e-165 584.7 412 68.7
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 5.1e-164 581.6 457 67.2
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 8.7e-164 580.9 400 69.8
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 2.5e-163 579.3 440 65.9
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 6.1e-157 558.1 417 71.7
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 7.9e-157 557.8 354 79.4
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 9.4e-150 534.3 386 66.3
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 1.7e-146 523.5 298 85.6
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 2.7e-141 506.1 279 88.2
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 1.5e-139 500.4 296 82.1
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 6.5e-135 485.0 406 61.1
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 2.0e-131 473.4 313 77.6
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.8e-129 466.8 423 61.7
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 5.3e-129 465.3 314 74.2
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.7e-128 463.0 411 61.8
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.1e-126 457.6 252 87.7
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.1e-126 457.6 252 87.7
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.1e-126 457.6 332 71.7
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 5.9e-112 408.7 413 48.9
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 2.1e-93 347.1 242 75.2
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 5.6e-78 295.8 321 47.4
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 4.6e-64 249.6 337 42.7
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 5.5e-57 226.1 402 36.3
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 8.2e-53 212.2 347 36.3
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.5e-51 208.0 395 35.2
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 9.3e-49 198.7 117 82.9
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 8.7e-47 192.2 349 34.7
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 9.0e-44 182.2 100 89.0
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 1.2e-43 181.8 102 84.3
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 2.0e-43 181.0 96 95.8
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 2.2e-42 177.6 362 31.5
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 1.1e-41 175.3 143 62.2
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 3.9e-39 166.8 148 60.1
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 1.4e-20 105.1 51 86.3
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 2.6e-14 84.3 45 95.6
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 1.2e-08 65.5 160 28.1
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 1.2e-08 65.5 41 78.0
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.6e-08 65.1 42 78.6
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 8.0e-08 62.8 85 48.2


User provided reference genes

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