Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 8.2e-255 883.2 453 100.0
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 1.3e-207 726.5 455 82.6
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 1.6e-205 719.5 455 82.2
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 1.1e-161 573.9 438 70.8
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 1.5e-131 473.8 416 63.7
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 3.1e-129 466.1 436 59.6
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 7.7e-128 461.5 437 59.7
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 2.3e-124 449.9 436 59.4
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 3.9e-124 449.1 411 61.1
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 9.7e-123 444.5 443 57.1
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 2.2e-122 443.4 389 62.0
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 4.8e-122 442.2 404 59.7
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 1.4e-121 440.7 319 71.8
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 1.8e-121 440.3 415 60.2
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 4.1e-121 439.1 396 60.6
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 5.3e-121 438.7 413 60.8
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 2.6e-120 436.4 400 61.0
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 5.0e-119 432.2 439 54.9
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 1.5e-118 430.6 403 59.3
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 1.9e-118 430.3 399 61.7
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 5.5e-118 428.7 411 59.9
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 1.2e-117 427.6 414 58.5
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 6.1e-117 425.2 419 57.3
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 6.1e-117 425.2 389 59.9
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 8.0e-117 424.9 409 57.9
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 8.0e-117 424.9 436 56.7
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 8.0e-117 424.9 406 57.9
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 8.0e-117 424.9 411 58.9
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.8e-116 423.7 436 56.7
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 4.0e-116 422.5 404 57.9
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 2.8e-114 416.4 420 56.4
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 4.8e-114 415.6 436 55.7
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 5.3e-113 412.1 401 59.1
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 7.0e-113 411.8 409 56.2
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 2.0e-112 410.2 409 57.7
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 2.7e-112 409.8 399 57.6
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 5.9e-112 408.7 392 56.9
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 7.7e-112 408.3 449 53.5
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 1.0e-111 407.9 396 56.3
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 2.9e-111 406.4 400 55.8
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 9.4e-110 401.4 436 53.9
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 1.6e-109 400.6 396 54.5
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 2.3e-108 396.7 416 55.8
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 4.0e-108 396.0 392 56.1
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 2.6e-107 393.3 412 54.1
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 1.1e-105 387.9 413 53.3
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 3.1e-105 386.3 398 55.5
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 4.1e-105 386.0 415 52.5
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 7.7e-104 381.7 347 60.8
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 6.6e-103 378.6 409 52.8
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 4.2e-102 375.9 347 59.9
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 1.6e-101 374.0 409 51.8
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 1.6e-101 374.0 415 51.3
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 1.8e-100 370.5 404 53.2
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 3.0e-100 369.8 396 52.0
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 1.2e-99 367.9 339 59.6
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 2.2e-98 363.6 425 53.2
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 8.3e-98 361.7 415 50.8
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 1.8e-97 360.5 300 62.0
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 5.9e-96 355.5 462 47.8
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 7.8e-96 355.1 436 47.9
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 2.5e-94 350.1 443 48.3
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 5.6e-94 349.0 428 48.6
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 7.3e-94 348.6 409 48.4
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 8.0e-93 345.1 409 48.4
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 3.1e-92 343.2 409 48.4
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 5.2e-92 342.4 402 50.0
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 5.2e-92 342.4 399 48.6
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 8.9e-92 341.7 419 47.7
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 5.8e-91 339.0 410 48.5
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 1.3e-90 337.8 412 46.8
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 1.9e-89 334.0 428 46.5
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 3.2e-89 333.2 430 46.3
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 4.1e-89 332.8 414 47.3
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 5.4e-89 332.4 429 45.9
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 7.0e-89 332.0 412 46.1
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 4.6e-88 329.3 417 46.8
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 6.0e-88 328.9 408 46.6
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 7.8e-88 328.6 416 45.4
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 3.9e-87 326.2 432 44.2
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 1.1e-86 324.7 312 59.3
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 2.8e-85 320.1 314 58.6
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 6.8e-84 315.5 454 44.1
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 6.4e-82 308.9 320 54.7
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 1.6e-80 304.3 328 53.4
Os05g0457700 Oryza sativa ssp. japonica HOM05D006045 ORTHO05D007678 1.9e-78 297.4 432 43.8
CiPaw.09G197100 Carya illinoinensis HOM05D006045 ORTHO05D007678 1.6e-77 294.3 220 70.0
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 2.1e-77 293.9 335 53.1
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 6.2e-77 292.4 517 39.7
C03p00810 Brassica napus HOM05D006045 ORTHO05D007678 3.7e-74 283.1 408 43.9
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 1.9e-73 280.8 407 43.2
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 3.5e-72 276.6 335 47.8
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 3.9e-71 273.1 387 42.6
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 6.6e-71 272.3 352 46.6
FAN05G2873 Fragaria x ananassa HOM05D006045 ORTHO05D007678 2.6e-67 260.4 207 65.2
HPP92_014298 Vanilla planifolia HOM05D006045 ORTHO05D007678 4.6e-64 249.6 256 52.7
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 3.6e-61 240.0 434 38.7
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 5.3e-60 236.1 288 46.9
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 2.0e-59 234.2 396 41.7
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 4.3e-46 189.9 293 40.6
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 7.6e-43 179.1 378 32.8
SMO361G0160 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 2.5e-41 174.1 394 32.5
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 9.3e-41 172.2 426 31.7
SMO361G0306 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 7.9e-40 169.1 395 32.4
Atru.chr8.2013 Acer truncatum HOM05D006045 ORTHO05D007678 4.3e-38 163.3 403 34.2
PSO063G1044 Papaver somniferum HOM05D006045 ORTHO05D007678 6.2e-37 159.5 214 45.8
Gohir.A04G065314 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.2e-35 155.2 116 66.4
COL.COLO4_14760 Corchorus olitorius HOM05D006045 ORTHO05D007678 5.7e-30 136.3 302 35.8
CBR_g8766 Chara braunii HOM05D006045 ORTHO05D007678 2.2e-29 134.4 419 28.4
PSO339G4427 Papaver somniferum HOM05D006045 ORTHO05D007678 1.4e-25 121.7 168 47.6
Hma1.2p1_0028F.1_g017940 Hydrangea macrophylla HOM05D006045 ORTHO05D007678 1.6e-24 118.2 152 46.1
Cpa.g.sc169.5 Carica papaya HOM05D006045 ORTHO05D007678 2.4e-20 104.4 178 42.1
Zm00001eb351230 Zea mays HOM05D006045 ORTHO05D007678 7.2e-17 92.8 272 32.0
HPP92_014299 Vanilla planifolia HOM05D006045 ORTHO05D007678 3.9e-15 87.0 101 45.5
MD07G1261700 Malus domestica HOM05D006045 ORTHO05D007678 4.8e-13 80.1 77 58.4
Dinv35575 Davidia involucrata HOM05D006045 ORTHO05D007678 6.1e-08 63.2 177 29.9
Medtr7g062690 Medicago truncatula HOM05D006045 ORTHO05D007678 1.1e-06 58.9 71 46.5
unitig_21.g21014 Utricularia gibba HOM05D006045 ORTHO05D007678 4.4e-06 57.0 69 46.4
Lsat_1_v5_gn_1_108300 Lactuca sativa HOM05D000747 ORTHO05D015226 9.7e-06 55.8 73 45.2


User provided reference genes

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