Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03011 Beta vulgaris HOM05D008188 ORTHO05D010325 2.1e-99 365.5 167 100.0
EL10Ac2g03007 Beta vulgaris HOM05D008188 ORTHO05D010325 1.4e-98 362.8 167 98.8
EL10Ac2g03009 Beta vulgaris HOM05D008188 ORTHO05D010325 3.1e-98 361.7 167 98.2
EL10Ac6g15502 Beta vulgaris HOM05D008188 ORTHO05D010325 3.7e-96 354.8 167 97.0
EL10Ac6g15503 Beta vulgaris HOM05D008188 ORTHO05D010325 3.7e-96 354.8 167 97.0
EL10Ac6g15527 Beta vulgaris HOM05D008188 ORTHO05D010325 2.6e-89 332.0 167 90.4
EL10Ac6g15529 Beta vulgaris HOM05D008188 ORTHO05D010325 2.6e-89 332.0 167 90.4
EL10Ac6g15504 Beta vulgaris HOM05D008188 ORTHO05D010325 3.7e-88 328.2 164 92.1
EL10Ac5g12929 Beta vulgaris HOM05D008188 ORTHO05D010325 1.9e-79 299.3 168 83.9
AUR62024467 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.3e-69 265.8 163 73.0
AUR62026058 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.9e-69 265.0 162 72.2
AUR62020326 Chenopodium quinoa HOM05D008188 ORTHO05D010325 8.7e-69 263.8 169 71.6
AUR62015897 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.1e-68 263.5 171 69.6
EL10Ac6g15528 Beta vulgaris HOM05D008188 ORTHO05D010325 5.8e-65 251.1 124 92.7
AUR62015896 Chenopodium quinoa HOM05D008188 ORTHO05D010325 9.3e-55 217.2 153 65.4
EL10As2g23257 Beta vulgaris HOM05D008188 ORTHO05D010325 1.4e-47 193.4 157 58.0
EL10As2g23259 Beta vulgaris HOM05D008188 ORTHO05D010325 1.4e-47 193.4 157 58.0
EL10Ac4g07682 Beta vulgaris HOM05D008188 ORTHO05D010325 2.7e-46 189.1 164 53.7
EL10Ac4g07719 Beta vulgaris HOM05D008188 ORTHO05D010325 1.0e-45 187.2 154 55.8
AUR62015890 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.1e-44 183.7 163 53.4
EL10Ac4g07680 Beta vulgaris HOM05D008188 ORTHO05D010325 3.7e-43 178.7 162 50.0
EL10Ac4g07667 Beta vulgaris HOM05D008188 ORTHO05D010325 2.6e-41 172.6 151 55.0
EL10Ac6g15505 Beta vulgaris HOM05D008188 ORTHO05D010325 1.7e-40 169.9 166 50.0
EL10Ac6g15508 Beta vulgaris HOM05D008188 ORTHO05D010325 1.1e-39 167.2 167 48.5
EL10Ac6g15512 Beta vulgaris HOM05D008188 ORTHO05D010325 1.1e-39 167.2 167 48.5
EL10Ac6g15506 Beta vulgaris HOM05D008188 ORTHO05D010325 2.5e-39 166.0 166 48.8
EL10Ac6g15507 Beta vulgaris HOM05D008188 ORTHO05D010325 2.5e-39 166.0 166 48.8
EL10Ac4g07681 Beta vulgaris HOM05D008188 ORTHO05D010325 4.2e-39 165.2 157 49.7
EL10Ac4g07713 Beta vulgaris HOM05D008188 ORTHO05D010325 4.2e-39 165.2 158 50.6
EL10Ac6g15510 Beta vulgaris HOM05D008188 ORTHO05D010325 5.5e-39 164.9 166 48.2
EL10Ac6g15513 Beta vulgaris HOM05D008188 ORTHO05D010325 5.5e-39 164.9 166 48.2
EL10As8g23832 Beta vulgaris HOM05D008188 ORTHO05D010325 4.6e-38 161.8 166 47.0
EL10Ac6g15514 Beta vulgaris HOM05D008188 ORTHO05D010325 1.5e-36 156.8 166 47.6
EL10Ac8g19709 Beta vulgaris HOM05D008188 ORTHO05D010325 1.1e-34 150.6 145 48.3
AUR62015695 Chenopodium quinoa HOM05D008188 ORTHO05D010325 9.1e-34 147.5 149 47.0
EL10Ac4g07670 Beta vulgaris HOM05D001974 ORTHO05D001995 1.2e-33 147.1 154 48.7
AUR62039716 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.5e-33 146.7 156 46.8
AUR62044614 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.5e-33 146.7 156 46.8
EL10Ac8g20539 Beta vulgaris HOM05D008188 ORTHO05D010325 2.0e-33 146.4 163 46.0
AUR62036266 Chenopodium quinoa HOM05D008188 ORTHO05D010325 7.2e-31 137.9 152 45.4
AUR62034788 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.7e-30 135.2 158 43.7
AUR62015893 Chenopodium quinoa HOM05D008188 ORTHO05D010325 7.4e-28 127.9 157 44.6
AUR62020330 Chenopodium quinoa HOM05D008188 ORTHO05D010325 9.7e-28 127.5 155 40.6
Ah.06g181820 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.3e-27 127.1 151 43.7
AUR62015892 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.8e-26 123.2 154 40.9
AUR62038400 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.4e-26 122.9 162 38.9
AUR62015894 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.1e-26 122.1 158 39.9
AUR62010295 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.0e-25 119.8 152 42.1
AUR62010294 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.6e-25 119.4 151 41.7
AUR62041158 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.5e-23 111.7 135 43.7
AUR62020328 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.7e-22 108.6 130 43.1
AUR62020332 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.7e-22 108.6 130 43.1
AUR62044316 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.7e-22 108.6 130 43.1
Ah.12g061570 Amaranthus hybridus HOM05D008188 ORTHO05D010325 7.4e-20 101.3 146 42.5
AUR62029286 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.9e-17 91.7 94 47.9
AUR62015891 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.1e-15 87.4 61 65.6
Lsat_1_v5_gn_1_17740 Lactuca sativa HOM05D000862 ORTHO05D000943 2.1e-14 83.2 148 34.5
QL02p008677 Quercus lobata HOM05D000862 ORTHO05D000943 4.7e-14 82.0 157 35.7
PGSC0003DMG400003733 Solanum tuberosum HOM05D000862 ORTHO05D000943 4.7e-14 82.0 130 36.2
HanXRQChr02g0047121 Helianthus annuus HOM05D000862 ORTHO05D010325 8.0e-14 81.3 143 35.0
Ah.04g166220 Amaranthus hybridus HOM05D008188 ORTHO05D010325 2.3e-13 79.7 87 42.5
Ah.12g057670 Amaranthus hybridus HOM05D008188 ORTHO05D010325 2.3e-13 79.7 85 50.6
Nitab4.5_0002983g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.0e-13 79.3 153 31.4
Os12g0198700 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 1.2e-12 77.4 151 29.8
CAN.G1226.20 Capsicum annuum HOM05D000862 ORTHO05D000943 2.0e-12 76.6 130 33.8
EL10Ac4g07669 Beta vulgaris HOM05D001974 ORTHO05D001995 4.4e-12 75.5 149 33.6
PGSC0003DMG404017205 Solanum tuberosum HOM05D000862 ORTHO05D000943 5.7e-12 75.1 127 33.9
HanXRQChr11g0352391 Helianthus annuus HOM05D000862 ORTHO05D000943 7.5e-12 74.7 132 36.4
AUR62010292 Chenopodium quinoa HOM05D008188 ORTHO05D010325 9.7e-12 74.3 117 38.5
Os11g0524900 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 1.3e-11 73.9 151 30.5
Rhsim06G0033000 Rhododendron simsii HOM05D000862 ORTHO05D000943 1.3e-11 73.9 157 32.5
Atru.chr13.467 Acer truncatum HOM05D000862 ORTHO05D000943 2.2e-11 73.2 157 33.8
Solyc09g090445.1 Solanum lycopersicum HOM05D000862 ORTHO05D000943 2.2e-11 73.2 127 35.4
Atru.chr1.3874 Acer truncatum HOM05D000011 ORTHO05D002639 4.8e-11 72.0 162 34.6
Ah.04g166240 Amaranthus hybridus HOM05D008188 ORTHO05D010325 4.8e-11 72.0 72 40.3
Atru.chr1.3872 Acer truncatum HOM05D000862 ORTHO05D000943 6.3e-11 71.6 128 35.2
Os02g0301800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 8.2e-11 71.2 147 31.3
SGA_v2.0_scaffold326G48727 Striga asiatica HOM05D000862 ORTHO05D000943 8.2e-11 71.2 128 32.8
Atru.chr1.3869 Acer truncatum HOM05D000862 ORTHO05D000943 1.4e-10 70.5 130 34.6
Ah.04g166210 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.4e-10 70.5 65 46.2
Os04g0369100 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000452 1.4e-10 70.5 164 29.3
Os12g0247700 Oryza sativa ssp. japonica HOM05D012838 ORTHO05D000943 1.4e-10 70.5 151 27.2
Nitab4.5_0002727g0030 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.8e-10 70.1 138 33.3
Ah.04g166230 Amaranthus hybridus HOM05D008188 ORTHO05D010325 2.4e-10 69.7 70 44.3
EL10Ac4g07715 Beta vulgaris HOM05D005485 ORTHO05D010325 2.4e-10 69.7 66 51.5
Ah.04g166330 Amaranthus hybridus HOM05D008188 ORTHO05D010325 3.1e-10 69.3 57 52.6
Peaxi162Scf00417g01331 Petunia axillaris HOM05D000862 ORTHO05D000943 4.1e-10 68.9 130 33.1
Os11g0524601 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 7.0e-10 68.2 158 31.6
AUR62026059 Chenopodium quinoa HOM05D008188 ORTHO05D010325 9.1e-10 67.8 43 69.8
Lsat_1_v5_gn_0_36281 Lactuca sativa HOM05D000862 ORTHO05D000943 1.6e-09 67.0 147 32.0
Nitab4.5_0001740g0110 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.6e-09 67.0 133 31.6
HanXRQChr08g0212671 Helianthus annuus HOM05D000862 ORTHO05D000943 2.0e-09 66.6 151 27.8
Nitab4.5_0009433g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.0e-09 66.6 133 30.8
Lju1609A2T33 Lonicera japonica HOM05D000862 ORTHO05D000943 2.7e-09 66.2 130 36.2
Sabra17G0025900 Salix brachista HOM05D000862 ORTHO05D000943 2.7e-09 66.2 131 35.9
Os06g0169001 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 3.5e-09 65.9 126 35.7
Zm00001eb167140 Zea mays HOM05D000862 ORTHO05D000452 4.5e-09 65.5 154 28.6
Atru.chr11.2300 Acer truncatum HOM05D000862 ORTHO05D000943 5.9e-09 65.1 150 31.3
HanXRQChr02g0042271 Helianthus annuus HOM05D000862 ORTHO05D000943 5.9e-09 65.1 131 36.6
Nitab4.5_0005485g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 7.7e-09 64.7 134 30.6
Nitab4.5_0012015g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 7.7e-09 64.7 135 32.6
Zm00001eb392870 Zea mays HOM05D000862 ORTHO05D000943 1.3e-08 63.9 141 28.4
HanXRQChr14g0439381 Helianthus annuus HOM05D000041 ORTHO05D000452 1.7e-08 63.5 153 28.8
TAR371G0385 Trochodendron aralioides HOM05D000862 ORTHO05D000943 1.7e-08 63.5 129 33.3
BcaB07g31985 Brassica carinata HOM05D000862 ORTHO05D000943 3.8e-08 62.4 136 27.9
COL.COLO4_26231 Corchorus olitorius HOM05D000862 ORTHO05D000943 3.8e-08 62.4 128 29.7
Lju427C3T2 Lonicera japonica HOM05D000862 ORTHO05D000943 3.8e-08 62.4 164 30.5
Ah.11g046620 Amaranthus hybridus HOM05D008188 ORTHO05D010325 5.0e-08 62.0 63 47.6
HanXRQChr02g0042121 Helianthus annuus HOM05D000862 ORTHO05D000943 5.0e-08 62.0 149 28.2
TWI14G0123 Tripterygium wilfordii HOM05D000862 ORTHO05D000943 5.0e-08 62.0 152 31.6
Ah.06g182150 Amaranthus hybridus HOM05D008188 ORTHO05D010325 6.5e-08 61.6 77 41.6
Lsat_1_v5_gn_0_34700 Lactuca sativa HOM05D000862 ORTHO05D000943 6.5e-08 61.6 122 34.4
CANSAT54G1423 Cannabis sativa HOM05D000862 ORTHO05D000943 8.5e-08 61.2 158 31.0
Nitab4.5_0002977g0140 Nicotiana tabacum HOM05D000011 ORTHO05D001721 8.5e-08 61.2 128 28.9
Hma1.2p1_1775F.1_g301900 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 1.5e-07 60.5 125 32.0
Zm00001eb265850 Zea mays HOM05D012838 ORTHO05D000943 1.9e-07 60.1 164 26.8
HanXRQChr17g0564441 Helianthus annuus HOM05D000041 ORTHO05D000452 3.2e-07 59.3 152 27.0
Lsat_1_v5_gn_8_100620 Lactuca sativa HOM05D000862 ORTHO05D000452 4.2e-07 58.9 155 27.1
Ciclev10000604m.g Citrus clementina HOM05D000862 ORTHO05D000943 5.5e-07 58.5 119 33.6
Nitab4.5_0005485g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 5.5e-07 58.5 132 33.3
Os06g0169900 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 7.2e-07 58.2 150 30.0
Os12g0228700 Oryza sativa ssp. japonica HOM05D012838 ORTHO05D000943 7.2e-07 58.2 115 32.2
Ah.04g166300 Amaranthus hybridus HOM05D001974 ORTHO05D001995 1.2e-06 57.4 62 40.3
Hma1.2p1_2356F.1_g320550 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 1.6e-06 57.0 165 28.5
Os11g0607900 Oryza sativa ssp. japonica HOM05D000022 ORTHO05D000452 1.6e-06 57.0 90 38.9
Ca_05614_v3 Cicer arietinum L. HOM05D000862 ORTHO05D000003 2.1e-06 56.6 80 36.2
Manes.05G154000 Manihot esculenta HOM05D000862 ORTHO05D000943 2.1e-06 56.6 81 40.7
CiPaw.07G156100 Carya illinoinensis HOM05D000862 ORTHO05D000943 2.7e-06 56.2 128 32.8
Psat2g057640 Pisum sativum HOM05D000862 ORTHO05D000943 3.6e-06 55.8 80 37.5
RcHm_v2.0_Chr6g0301821 Rosa chinensis HOM05D000862 ORTHO05D000943 3.6e-06 55.8 128 30.5
Zm00001eb097060 Zea mays HOM05D000862 ORTHO05D000943 4.7e-06 55.5 96 33.3
Hma1.2p1_1397F.1_g280670 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 6.1e-06 55.1 125 29.6
Hma1.2p1_2241F.1_g317835 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 6.1e-06 55.1 125 29.6
LjContig00155g0010021 Lotus japonicus HOM05D000862 ORTHO05D000943 6.1e-06 55.1 80 35.0
HanXRQChr02g0042151 Helianthus annuus HOM05D000862 ORTHO05D000943 8.0e-06 54.7 148 29.1


User provided reference genes

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