Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02957 Beta vulgaris HOM05D001482 ORTHO05D001499 6.5e-128 460.7 223 100.0
EL10Ac6g13700 Beta vulgaris HOM05D001482 ORTHO05D001499 9.3e-18 94.7 63 71.4
Ah.03g132820 Amaranthus hybridus HOM05D001482 ORTHO05D001499 3.1e-13 79.7 64 57.8
AUR62014067 Chenopodium quinoa HOM05D001482 ORTHO05D001499 2.0e-12 77.0 71 52.1
Hund25364 Selenicereus undatus HOM05D001482 ORTHO05D001499 2.0e-12 77.0 72 51.4
AUR62005407 Chenopodium quinoa HOM05D001482 ORTHO05D001499 2.6e-12 76.6 71 52.1
arahy.Tifrunner.gnm1.ann1.B5NWYW Arachis hypogaea HOM05D001482 ORTHO05D001499 2.5e-10 70.1 62 53.2
ECA246G3327 Erigeron canadensis HOM05D001482 ORTHO05D001499 3.2e-10 69.7 62 48.4
arahy.Tifrunner.gnm1.ann1.6HYH4U Arachis hypogaea HOM05D001482 ORTHO05D001499 4.2e-10 69.3 62 53.2
MBI16_g27077_MAGBIO Magnolia biondii HOM05D001482 ORTHO05D001499 4.2e-10 69.3 62 50.0
RcHm_v2.0_Chr1g0322501 Rosa chinensis HOM05D001482 ORTHO05D001499 4.2e-10 69.3 94 38.3
QL03p059565 Quercus lobata HOM05D001482 ORTHO05D001499 5.5e-10 68.9 71 46.5
ECA233G3680 Erigeron canadensis HOM05D001482 ORTHO05D001499 7.1e-10 68.6 63 50.8
Rhsim12G0114900 Rhododendron simsii HOM05D001482 ORTHO05D001499 7.1e-10 68.6 77 44.2
Oeu063457.1 Olea europaea HOM05D001482 ORTHO05D001499 9.3e-10 68.2 62 48.4
Dinv15274 Davidia involucrata HOM05D001482 ORTHO05D001499 1.2e-09 67.8 49 55.1
HanXRQChr08g0208681 Helianthus annuus HOM05D001482 ORTHO05D001499 1.2e-09 67.8 62 51.6
Nitab4.5_0001289g0140 Nicotiana tabacum HOM05D001482 ORTHO05D001499 3.5e-09 66.2 81 40.7
VMungo1215G3159 Vigna mungo HOM05D001482 ORTHO05D001499 3.5e-09 66.2 62 48.4
Cpa.g.sc470.2 Carica papaya HOM05D001482 ORTHO05D001499 4.6e-09 65.9 71 43.7
Glyma.02G035700 Glycine max HOM05D001482 ORTHO05D001499 4.6e-09 65.9 49 53.1
Lj2g0005702 Lotus japonicus HOM05D001482 ORTHO05D001499 4.6e-09 65.9 62 46.8
HanXRQChr09g0266271 Helianthus annuus HOM05D001482 ORTHO05D001499 6.0e-09 65.5 69 44.9
Nitab4.5_0000149g0260 Nicotiana tabacum HOM05D001482 ORTHO05D001499 7.9e-09 65.1 81 39.5
Phvul.002G070300 Phaseolus vulgaris HOM05D001482 ORTHO05D001499 7.9e-09 65.1 49 53.1
vmacro16229 Vaccinium macrocarpon HOM05D001482 ORTHO05D001499 7.9e-09 65.1 62 48.4
Peaxi162Scf00326g00710 Petunia axillaris HOM05D001482 ORTHO05D001499 1.0e-08 64.7 49 57.1
Lsat_1_v5_gn_0_29301 Lactuca sativa HOM05D001482 ORTHO05D001499 1.3e-08 64.3 62 45.2
MD17G1031900 Malus domestica HOM05D001482 ORTHO05D001499 1.3e-08 64.3 58 48.3
PSO210G2925 Papaver somniferum HOM05D001482 ORTHO05D001499 1.3e-08 64.3 62 48.4
CAN.G192.1 Capsicum annuum HOM05D001482 ORTHO05D001499 1.8e-08 63.9 49 57.1
CAN.G53.35 Capsicum annuum HOM05D001482 ORTHO05D001499 1.8e-08 63.9 49 57.1
Ca_04180_v3 Cicer arietinum L. HOM05D001482 ORTHO05D001499 1.8e-08 63.9 62 46.8
DCAR_014681 Daucus carota HOM05D001482 ORTHO05D001499 1.8e-08 63.9 49 53.1
PGSC0003DMG400015504 Solanum tuberosum HOM05D001482 ORTHO05D001499 1.8e-08 63.9 49 57.1
CSS0009993 Camellia sinensis var. sinensis HOM05D001482 ORTHO05D001499 2.3e-08 63.5 49 53.1
CSS0020966 Camellia sinensis var. sinensis HOM05D001482 ORTHO05D001499 2.3e-08 63.5 49 53.1
Nitab4.5_0000140g0060 Nicotiana tabacum HOM05D001482 ORTHO05D001499 2.3e-08 63.5 49 55.1
Nitab4.5_0002790g0030 Nicotiana tabacum HOM05D001482 ORTHO05D001499 2.3e-08 63.5 49 55.1
DCAR_011239 Daucus carota HOM05D001482 ORTHO05D001499 3.0e-08 63.2 62 45.2
ECA232G3779 Erigeron canadensis HOM05D001482 ORTHO05D001499 3.0e-08 63.2 49 51.0
Hma1.2p1_0224F.1_g094660 Hydrangea macrophylla HOM05D001482 ORTHO05D001499 3.0e-08 63.2 49 55.1
Lalb_Chr16g0382201 Lupinus albus HOM05D001482 ORTHO05D001499 3.0e-08 63.2 62 45.2
arahy.Tifrunner.gnm1.ann1.8040JK Arachis hypogaea HOM05D001482 ORTHO05D001499 3.9e-08 62.8 49 53.1
arahy.Tifrunner.gnm1.ann1.JED5FR Arachis hypogaea HOM05D001482 ORTHO05D001499 3.9e-08 62.8 49 53.1
Os03g0110800 Oryza sativa ssp. japonica HOM05D001482 ORTHO05D001499 3.9e-08 62.8 61 47.5
PSO210G5384 Papaver somniferum HOM05D001482 ORTHO05D001499 3.9e-08 62.8 49 55.1
Peaxi162Scf00089g00638 Petunia axillaris HOM05D001482 ORTHO05D001499 3.9e-08 62.8 49 53.1
PGSC0003DMG400001934 Solanum tuberosum HOM05D001482 ORTHO05D001499 5.1e-08 62.4 49 53.1
Nn3g16837 Nelumbo nucifera HOM05D001482 ORTHO05D001499 6.7e-08 62.0 62 45.2
Zm00001eb000820 Zea mays HOM05D001482 ORTHO05D001499 6.7e-08 62.0 70 42.9
Dinv33473 Davidia involucrata HOM05D001482 ORTHO05D001499 8.7e-08 61.6 58 46.6
RcHm_v2.0_Chr1g0322481 Rosa chinensis HOM05D001482 ORTHO05D001499 8.7e-08 61.6 107 32.7
Eucgr.J02221 Eucalyptus grandis HOM05D001482 ORTHO05D001499 1.1e-07 61.2 58 44.8
FAN14G5206 Fragaria x ananassa HOM05D001482 ORTHO05D001499 1.1e-07 61.2 50 50.0
Os11g0109200 Oryza sativa ssp. japonica HOM05D001482 ORTHO05D001499 1.1e-07 61.2 70 42.9
Prupe.3G287400 Prunus persica HOM05D001482 ORTHO05D001499 1.1e-07 61.2 49 53.1
COL.COLO4_24202 Corchorus olitorius HOM05D001482 ORTHO05D001499 1.5e-07 60.8 49 53.1
FAN02G2263 Fragaria x ananassa HOM05D001482 ORTHO05D001499 1.5e-07 60.8 49 53.1
FAN05G1187 Fragaria x ananassa HOM05D001482 ORTHO05D001499 1.5e-07 60.8 58 43.1
FAN05G5520 Fragaria x ananassa HOM05D001482 ORTHO05D001499 1.5e-07 60.8 49 53.1
FAN14G2994 Fragaria x ananassa HOM05D001482 ORTHO05D001499 1.5e-07 60.8 49 53.1
RcHm_v2.0_Chr2g0172381 Rosa chinensis HOM05D001482 ORTHO05D001499 1.5e-07 60.8 49 53.1
Solyc02g062740.3 Solanum lycopersicum HOM05D001482 ORTHO05D001499 1.5e-07 60.8 49 55.1
Sopen02g013760 Solanum pennellii HOM05D001482 ORTHO05D001499 1.5e-07 60.8 49 55.1
Zm00001eb404130 Zea mays HOM05D001482 ORTHO05D001499 1.5e-07 60.8 70 41.4
Atru.chr6.2336 Acer truncatum HOM05D001482 ORTHO05D001499 1.9e-07 60.5 62 45.2
MSTRG.15520 Avicennia marina HOM05D001482 ORTHO05D001499 1.9e-07 60.5 49 53.1
FAN09G3063 Fragaria x ananassa HOM05D001482 ORTHO05D001499 1.9e-07 60.5 58 43.1
Manes.17G113600 Manihot esculenta HOM05D001482 ORTHO05D001499 1.9e-07 60.5 49 51.0
TAR374G1638 Trochodendron aralioides HOM05D001482 ORTHO05D001499 1.9e-07 60.5 49 55.1
Ah.10g032250 Amaranthus hybridus HOM05D001482 ORTHO05D001499 2.5e-07 60.1 65 44.6
Aqoxy4G01785 Aquilegia oxysepala HOM05D001482 ORTHO05D001499 2.5e-07 60.1 50 46.0
CSS0028746 Camellia sinensis var. sinensis HOM05D001482 ORTHO05D001499 2.5e-07 60.1 49 53.1
CSS0045059 Camellia sinensis var. sinensis HOM05D001482 ORTHO05D001499 2.5e-07 60.1 49 53.1
CANSAT64G2550 Cannabis sativa HOM05D001482 ORTHO05D001499 2.5e-07 60.1 49 51.0
Carub.0006s1355 Capsella rubella HOM05D001482 ORTHO05D001499 2.5e-07 60.1 64 46.9
CDE07G0104 Ceratophyllum demersum HOM05D001482 ORTHO05D001499 2.5e-07 60.1 49 46.9
FvH4_6g50980 Fragaria vesca HOM05D001482 ORTHO05D001499 2.5e-07 60.1 49 53.1
Glyma.19G006100 Glycine max HOM05D001482 ORTHO05D001499 2.5e-07 60.1 49 51.0
Lalb_Chr06g0175881 Lupinus albus HOM05D001482 ORTHO05D001499 2.5e-07 60.1 49 51.0
RcHm_v2.0_Chr2g0136781 Rosa chinensis HOM05D001482 ORTHO05D001499 2.5e-07 60.1 49 49.0
CARHR198690 Cardamine hirsuta HOM05D001482 ORTHO05D001499 3.3e-07 59.7 48 56.2
CiPaw.03G040400 Carya illinoinensis HOM05D001482 ORTHO05D001499 3.3e-07 59.7 49 51.0
FvH4_6g30450 Fragaria vesca HOM05D001482 ORTHO05D001499 3.3e-07 59.7 49 49.0
FAN02G0888 Fragaria x ananassa HOM05D001482 ORTHO05D001499 3.3e-07 59.7 49 49.0
FAN09G3858 Fragaria x ananassa HOM05D001482 ORTHO05D001499 3.3e-07 59.7 49 51.0
MD09G1029900 Malus domestica HOM05D001482 ORTHO05D001499 3.3e-07 59.7 58 43.1
Nn6g33667 Nelumbo nucifera HOM05D001482 ORTHO05D001499 3.3e-07 59.7 58 41.4
Prupe.8G038800 Prunus persica HOM05D001482 ORTHO05D001499 3.3e-07 59.7 49 51.0
TAR622G1371 Trochodendron aralioides HOM05D001482 ORTHO05D001499 3.3e-07 59.7 62 45.2
EL10Ac2g03138 Beta vulgaris HOM05D001482 ORTHO05D001499 4.3e-07 59.3 58 48.3
COL.COLO4_24200 Corchorus olitorius HOM05D001482 ORTHO05D001499 4.3e-07 59.3 49 51.0
Duzib264G0359 Durio zibethinus HOM05D001482 ORTHO05D001499 4.3e-07 59.3 49 49.0
Glyma.05G005600 Glycine max HOM05D001482 ORTHO05D001499 4.3e-07 59.3 49 51.0
HanXRQChr17g0548301 Helianthus annuus HOM05D001482 ORTHO05D001499 4.3e-07 59.3 49 49.0
Lsat_1_v5_gn_4_183040 Lactuca sativa HOM05D001482 ORTHO05D001499 4.3e-07 59.3 49 53.1
Lj3A1054T82 Lonicera japonica HOM05D001482 ORTHO05D001499 4.3e-07 59.3 49 53.1
Medtr6g005580 Medicago truncatula HOM05D001482 ORTHO05D001499 4.3e-07 59.3 49 53.1
QL02p075785 Quercus lobata HOM05D001482 ORTHO05D001499 4.3e-07 59.3 49 51.0
Solyc04g005250.4 Solanum lycopersicum HOM05D001482 ORTHO05D001499 4.3e-07 59.3 49 51.0
Sopen04g001230 Solanum pennellii HOM05D001482 ORTHO05D001499 4.3e-07 59.3 49 51.0
Sopen10g028870 Solanum pennellii HOM05D001482 ORTHO05D001499 4.3e-07 59.3 49 53.1
PGSC0003DMG400007182 Solanum tuberosum HOM05D001482 ORTHO05D001499 4.3e-07 59.3 49 53.1
Dinv35085 Davidia involucrata HOM05D001482 ORTHO05D001499 5.7e-07 58.9 49 55.1
FvH4_6g30300 Fragaria vesca HOM05D001482 ORTHO05D001499 5.7e-07 58.9 49 49.0
Peaxi162Scf00005g00086 Petunia axillaris HOM05D001482 ORTHO05D001499 5.7e-07 58.9 49 53.1
Solyc10g078190.2 Solanum lycopersicum HOM05D001482 ORTHO05D001499 5.7e-07 58.9 49 53.1
SGA_v2.0_scaffold30G12437 Striga asiatica HOM05D001482 ORTHO05D001499 5.7e-07 58.9 49 53.1
Aqoxy3G02507 Aquilegia oxysepala HOM05D001482 ORTHO05D001499 7.4e-07 58.5 71 36.6
AUR62018181 Chenopodium quinoa HOM05D001482 ORTHO05D001499 7.4e-07 58.5 65 44.6
Haze_14697 Corylus avellana HOM05D001482 ORTHO05D001499 7.4e-07 58.5 49 51.0
FAN14G2299 Fragaria x ananassa HOM05D001482 ORTHO05D001499 7.4e-07 58.5 49 46.9
Lj7A595T67 Lonicera japonica HOM05D001482 ORTHO05D001499 7.4e-07 58.5 49 46.9
Rhsim08G0053000 Rhododendron simsii HOM05D001482 ORTHO05D001499 7.4e-07 58.5 59 44.1
RcHm_v2.0_Chr1g0322751 Rosa chinensis HOM05D001482 ORTHO05D001499 7.4e-07 58.5 58 48.3
RcHm_v2.0_Chr1g0323101 Rosa chinensis HOM05D001482 ORTHO05D001499 7.4e-07 58.5 58 48.3
HPP92_020268 Vanilla planifolia HOM05D001482 ORTHO05D001499 7.4e-07 58.5 62 41.9
AUR62038667 Chenopodium quinoa HOM05D001482 ORTHO05D001499 9.6e-07 58.2 65 43.1
Manes.15G149300 Manihot esculenta HOM05D001482 ORTHO05D001499 9.6e-07 58.2 49 49.0
RcHm_v2.0_Chr1g0328981 Rosa chinensis HOM05D001482 ORTHO05D001499 9.6e-07 58.2 49 53.1
SGA_v2.0_scaffold224G42979 Striga asiatica HOM05D001482 ORTHO05D001499 9.6e-07 58.2 49 53.1
vmacro18262 Vaccinium macrocarpon HOM05D001482 ORTHO05D001499 9.6e-07 58.2 60 41.7
VMungo0464G0844 Vigna mungo HOM05D001482 ORTHO05D001499 9.6e-07 58.2 49 53.1
AT5G15380 Arabidopsis thaliana HOM05D001482 ORTHO05D001499 1.3e-06 57.8 61 47.5
CAN.G959.16 Capsicum annuum HOM05D001482 ORTHO05D001499 1.3e-06 57.8 49 51.0
Gohir.A05G358100 Gossypium hirsutum HOM05D001482 ORTHO05D001499 1.3e-06 57.8 58 44.8
Gohir.A09G027200 Gossypium hirsutum HOM05D001482 ORTHO05D001499 1.3e-06 57.8 49 49.0
Gohir.D09G026850 Gossypium hirsutum HOM05D001482 ORTHO05D001499 1.3e-06 57.8 49 49.0
Gorai.006G031000 Gossypium raimondii HOM05D001482 ORTHO05D001499 1.3e-06 57.8 49 49.0
Lj7A594T53 Lonicera japonica HOM05D001482 ORTHO05D001499 1.3e-06 57.8 49 49.0
MBI10_g28005_MAGBIO Magnolia biondii HOM05D001482 ORTHO05D001499 1.3e-06 57.8 58 41.4
Phvul.004G011700 Phaseolus vulgaris HOM05D001482 ORTHO05D001499 1.3e-06 57.8 49 51.0
Thecc.04G012400 Theobroma cacao HOM05D001482 ORTHO05D001499 1.3e-06 57.8 49 49.0
TPR.G8713 Trifolium pratense HOM05D001482 ORTHO05D001499 1.3e-06 57.8 49 46.9
C09p62500 Brassica napus HOM05D001482 ORTHO05D001499 1.6e-06 57.4 61 49.2
BolC9t59090H Brassica oleracea HOM05D001482 ORTHO05D001499 1.6e-06 57.4 61 49.2
Duzib147G0648 Durio zibethinus HOM05D001482 ORTHO05D001499 1.6e-06 57.4 58 41.4
FAN14G0194 Fragaria x ananassa HOM05D001482 ORTHO05D001499 1.6e-06 57.4 68 39.7
Aa31LG11G14830 Aethionema arabicum HOM05D001482 ORTHO05D001499 2.1e-06 57.0 50 54.0
ATR1091G019 Amborella trichopoda HOM05D001482 ORTHO05D001499 2.1e-06 57.0 63 41.3
Aqoxy1G02523 Aquilegia oxysepala HOM05D001482 ORTHO05D001499 2.1e-06 57.0 49 44.9
Aqoxy4G01661 Aquilegia oxysepala HOM05D001482 ORTHO05D001499 2.1e-06 57.0 58 37.9
AL6G26240 Arabidopsis lyrata HOM05D001482 ORTHO05D001499 2.1e-06 57.0 61 45.9
FAN05G4389 Fragaria x ananassa HOM05D001482 ORTHO05D001499 2.1e-06 57.0 49 49.0
FAN09G3971 Fragaria x ananassa HOM05D001482 ORTHO05D001499 2.1e-06 57.0 49 49.0
Lju41C37G7 Lonicera japonica HOM05D001482 ORTHO05D001499 2.1e-06 57.0 49 46.9
Medtr5g019420 Medicago truncatula HOM05D001482 ORTHO05D001499 2.1e-06 57.0 49 49.0
CiPaw.04G026200 Carya illinoinensis HOM05D001482 ORTHO05D001499 2.8e-06 56.6 49 49.0
Cc09_g04720 Coffea canephora HOM05D001482 ORTHO05D001499 2.8e-06 56.6 58 44.8
PGR083G0117 Punica granatum HOM05D001482 ORTHO05D001499 2.8e-06 56.6 49 49.0
SEGI_26430 Sequoiadendron giganteum HOM05D001482 ORTHO05D001499 2.8e-06 56.6 68 33.8
unitig_0.g2799 Utricularia gibba HOM05D001482 ORTHO05D001499 2.8e-06 56.6 49 51.0
Aqoxy3G02901 Aquilegia oxysepala HOM05D001482 ORTHO05D001499 3.7e-06 56.2 49 46.9
BcaB03g14713 Brassica carinata HOM05D001482 ORTHO05D001499 3.7e-06 56.2 48 47.9
BcaC08g46386 Brassica carinata HOM05D001482 ORTHO05D001499 3.7e-06 56.2 48 50.0
A07p35820 Brassica napus HOM05D001482 ORTHO05D001499 3.7e-06 56.2 48 50.0
C06p40380 Brassica napus HOM05D001482 ORTHO05D001499 3.7e-06 56.2 48 50.0
BolC6t39394H Brassica oleracea HOM05D001482 ORTHO05D001499 3.7e-06 56.2 48 50.0
BraA07t31168Z Brassica rapa HOM05D001482 ORTHO05D001499 3.7e-06 56.2 48 50.0
Ciclev10014911m.g Citrus clementina HOM05D001482 ORTHO05D001499 3.7e-06 56.2 49 53.1
Gohir.D04G056000 Gossypium hirsutum HOM05D001482 ORTHO05D001499 3.7e-06 56.2 49 49.0
Gorai.012G062900 Gossypium raimondii HOM05D001482 ORTHO05D001499 3.7e-06 56.2 49 49.0
Psat1g054560 Pisum sativum HOM05D001482 ORTHO05D001499 3.7e-06 56.2 49 46.9
Potri.001G347000 Populus trichocarpa HOM05D001482 ORTHO05D001499 3.7e-06 56.2 49 44.9
RcHm_v2.0_Chr2g0136801 Rosa chinensis HOM05D001482 ORTHO05D001499 3.7e-06 56.2 49 46.9
SalBow7G2022 Salvia bowleyana HOM05D001482 ORTHO05D001499 3.7e-06 56.2 49 51.0
Hund12636 Selenicereus undatus HOM05D001482 ORTHO05D001499 3.7e-06 56.2 58 44.8
Actinidia35755 Actinidia chinensis HOM05D001482 ORTHO05D001499 4.8e-06 55.8 49 53.1
CSS0019924 Camellia sinensis var. sinensis HOM05D001482 ORTHO05D001499 4.8e-06 55.8 49 53.1
CSS0030691 Camellia sinensis var. sinensis HOM05D001482 ORTHO05D001499 4.8e-06 55.8 49 53.1
Cc11_g15320 Coffea canephora HOM05D001482 ORTHO05D001499 4.8e-06 55.8 49 46.9
Hund26557 Selenicereus undatus HOM05D001482 ORTHO05D001499 4.8e-06 55.8 49 53.1
THA.LOC104821084 Tarenaya hassleriana HOM05D001482 ORTHO05D001499 6.3e-06 55.5 48 47.9
Actinidia06011 Actinidia chinensis HOM05D001482 ORTHO05D001499 8.2e-06 55.1 49 49.0
A10p24030 Brassica napus HOM05D001482 ORTHO05D001499 8.2e-06 55.1 50 54.0
BraA10t44466Z Brassica rapa HOM05D001482 ORTHO05D001499 8.2e-06 55.1 50 54.0
Migut.K01383 Erythranthe guttata HOM05D001482 ORTHO05D001499 8.2e-06 55.1 49 51.0
Lj3g0026972 Lotus japonicus HOM05D001482 ORTHO05D001499 8.2e-06 55.1 49 51.0
Lalb_Chr05g0228291 Lupinus albus HOM05D001482 ORTHO05D001499 8.2e-06 55.1 58 39.7
Oeu062934.1 Olea europaea HOM05D001482 ORTHO05D001499 8.2e-06 55.1 49 49.0
Rhsim10G0019500 Rhododendron simsii HOM05D001482 ORTHO05D001499 8.2e-06 55.1 49 49.0
Sabra16G0226700 Salix brachista HOM05D001482 ORTHO05D001499 8.2e-06 55.1 49 44.9


User provided reference genes

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