Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 1.1e-53 213.0 100 100.0
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 1.1e-42 176.4 89 89.9
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 5.4e-42 174.1 90 87.8
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 2.7e-41 171.8 85 91.8
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 3.5e-41 171.4 84 90.5
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 6.6e-40 167.2 86 88.4
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 8.6e-40 166.8 85 89.4
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 1.9e-39 165.6 85 84.7
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 9.5e-39 163.3 88 79.5
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 9.5e-39 163.3 86 84.9
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 9.5e-39 163.3 86 84.9
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 1.2e-38 162.9 85 83.5
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 6.2e-38 160.6 87 79.3
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 6.2e-38 160.6 85 82.4
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 6.2e-38 160.6 91 75.8
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 6.2e-38 160.6 91 75.8
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 8.1e-38 160.2 88 80.7
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 8.1e-38 160.2 84 81.0
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 1.1e-37 159.8 87 79.3
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 1.1e-37 159.8 87 79.3
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 1.1e-37 159.8 85 81.2
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 1.1e-37 159.8 84 82.1
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 1.4e-37 159.5 84 83.3
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 1.4e-37 159.5 83 81.9
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.4e-37 159.5 85 82.4
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 1.8e-37 159.1 87 79.3
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 1.8e-37 159.1 85 82.4
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 3.1e-37 158.3 88 79.5
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.1e-37 158.3 86 79.1
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.1e-37 158.3 86 79.1
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.1e-37 158.3 86 79.1
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 3.1e-37 158.3 87 77.0
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 3.1e-37 158.3 85 80.0
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 4.0e-37 157.9 83 81.9
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 4.0e-37 157.9 85 81.2
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 4.0e-37 157.9 85 81.2
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 4.0e-37 157.9 84 82.1
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 5.2e-37 157.5 84 83.3
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 5.2e-37 157.5 85 80.0
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 5.2e-37 157.5 84 81.0
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 6.8e-37 157.1 85 80.0
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 6.8e-37 157.1 85 80.0
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 8.9e-37 156.8 85 82.4
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 8.9e-37 156.8 87 77.0
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 8.9e-37 156.8 87 77.0
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 8.9e-37 156.8 87 77.0
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 8.9e-37 156.8 85 80.0
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 8.9e-37 156.8 85 78.8
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 1.2e-36 156.4 87 77.0
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 1.2e-36 156.4 83 80.7
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 1.5e-36 156.0 85 78.8
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 1.5e-36 156.0 85 77.6
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 1.5e-36 156.0 85 78.8
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 2.6e-36 155.2 85 76.5
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 2.6e-36 155.2 86 77.9
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 3.4e-36 154.8 87 75.9
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 3.4e-36 154.8 85 76.5
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 4.4e-36 154.5 85 76.5
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 4.4e-36 154.5 85 78.8
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 4.4e-36 154.5 85 78.8
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 5.8e-36 154.1 83 80.7
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 7.6e-36 153.7 80 83.8
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 9.9e-36 153.3 84 78.6
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 1.7e-35 152.5 85 76.5
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 2.2e-35 152.1 89 74.2
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 2.9e-35 151.8 83 77.1
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 2.9e-35 151.8 88 73.9
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 3.8e-35 151.4 85 76.5
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 3.8e-35 151.4 85 76.5
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 6.4e-35 150.6 86 74.4
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 8.4e-35 150.2 85 75.3
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 1.1e-34 149.8 85 75.3
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 1.1e-34 149.8 85 75.3
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 1.1e-34 149.8 87 73.6
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 1.1e-34 149.8 87 74.7
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 1.9e-34 149.1 85 75.3
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 1.9e-34 149.1 89 77.5
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 2.4e-34 148.7 85 74.1
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 2.4e-34 148.7 85 78.8
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 2.4e-34 148.7 83 74.7
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 3.2e-34 148.3 85 72.9
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 3.2e-34 148.3 85 77.6
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 4.2e-34 147.9 85 74.1
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 4.2e-34 147.9 85 74.1
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 4.2e-34 147.9 85 74.1
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 4.2e-34 147.9 85 74.1
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 4.2e-34 147.9 85 74.1
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 4.2e-34 147.9 85 72.9
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 4.2e-34 147.9 79 79.7
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 5.4e-34 147.5 85 74.1
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 5.4e-34 147.5 85 74.1
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 5.4e-34 147.5 85 74.1
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 9.2e-34 146.7 85 72.9
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 1.2e-33 146.4 90 73.3
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 1.6e-33 146.0 83 78.3
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 1.6e-33 146.0 83 78.3
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 1.6e-33 146.0 84 76.2
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 2.1e-33 145.6 85 74.1
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 3.5e-33 144.8 87 72.4
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 3.9e-32 141.4 90 67.8
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 8.7e-32 140.2 81 70.4
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.5e-31 139.4 82 73.2
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 1.9e-31 139.0 88 71.6
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 5.6e-31 137.5 88 68.2
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 4.8e-30 134.4 84 72.6
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 4.8e-30 134.4 87 65.5
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 4.8e-30 134.4 83 73.5
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 6.2e-30 134.0 69 81.2
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 1.1e-29 133.3 85 69.4
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 1.8e-29 132.5 94 63.8
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 5.3e-29 131.0 80 66.2
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 5.3e-29 131.0 84 72.6
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 5.3e-29 131.0 83 66.3
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 6.9e-29 130.6 83 66.3
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 9.0e-29 130.2 87 65.5
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 1.7e-27 125.9 74 68.9
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 5.6e-23 110.9 70 71.4
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 5.6e-23 110.9 70 71.4
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 2.0e-20 102.4 81 48.1
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 1.4e-18 96.3 88 43.2
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 2.3e-16 89.0 81 48.1
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 6.7e-16 87.4 55 63.6
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 2.1e-14 82.4 82 41.5
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 6.2e-14 80.9 82 40.2
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 1.4e-13 79.7 42 73.8
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 4.2e-10 68.2 41 80.5
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 6.0e-09 64.3 86 41.9
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 7.4e-07 57.4 56 46.4


User provided reference genes

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