Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 2.5e-98 362.1 182 100.0
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 9.8e-66 253.8 184 76.1
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.3e-65 253.4 184 75.0
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 5.6e-61 238.0 189 67.7
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 1.1e-56 223.8 156 75.0
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 1.2e-52 210.3 149 72.5
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 3.6e-52 208.8 119 84.0
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 1.4e-51 206.8 121 81.0
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 1.8e-51 206.5 119 84.9
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 3.1e-51 205.7 119 84.9
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 4.0e-51 205.3 142 71.8
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 6.8e-51 204.5 166 63.9
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 8.9e-51 204.1 190 62.1
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 1.2e-50 203.8 142 71.1
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 1.2e-50 203.8 144 69.4
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 1.5e-50 203.4 128 75.8
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 1.5e-50 203.4 143 71.3
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 2.6e-50 202.6 180 61.1
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 2.6e-50 202.6 121 79.3
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 9.8e-50 200.7 155 65.2
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 1.3e-49 200.3 119 79.0
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 2.2e-49 199.5 185 57.8
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 2.9e-49 199.1 121 81.0
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 3.7e-49 198.7 190 58.9
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 4.9e-49 198.4 175 60.6
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 6.4e-49 198.0 144 66.7
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 6.4e-49 198.0 127 77.2
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 6.4e-49 198.0 121 81.0
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 6.4e-49 198.0 120 80.8
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 6.4e-49 198.0 119 79.0
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 1.1e-48 197.2 119 77.3
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 1.1e-48 197.2 139 69.1
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.4e-48 196.8 146 67.1
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 1.4e-48 196.8 144 66.0
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 1.9e-48 196.4 171 60.8
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 2.4e-48 196.1 121 76.0
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 3.2e-48 195.7 130 72.3
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 5.4e-48 194.9 120 79.2
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 5.4e-48 194.9 180 59.4
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 7.0e-48 194.5 110 82.7
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 1.2e-47 193.7 119 79.0
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 2.0e-47 193.0 120 78.3
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 3.5e-47 192.2 120 78.3
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 3.5e-47 192.2 155 61.9
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 4.6e-47 191.8 119 76.5
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 4.6e-47 191.8 140 69.3
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 1.0e-46 190.7 141 69.5
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 1.3e-46 190.3 115 79.1
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 2.3e-46 189.5 117 77.8
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 2.3e-46 189.5 117 77.8
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 2.3e-46 189.5 128 73.4
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 3.9e-46 188.7 115 76.5
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 3.9e-46 188.7 121 75.2
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 6.6e-46 188.0 110 80.9
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 8.6e-46 187.6 115 76.5
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 8.6e-46 187.6 151 64.9
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 1.5e-45 186.8 117 76.1
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 1.9e-45 186.4 117 76.9
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 1.9e-45 186.4 117 76.9
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 1.9e-45 186.4 117 75.2
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.9e-45 186.4 119 76.5
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 1.9e-45 186.4 126 73.8
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 2.5e-45 186.0 117 75.2
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 3.3e-45 185.7 115 76.5
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 5.6e-45 184.9 124 73.4
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 7.3e-45 184.5 115 74.8
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 7.3e-45 184.5 124 79.0
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 7.3e-45 184.5 121 73.6
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 7.3e-45 184.5 118 78.8
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 9.5e-45 184.1 124 73.4
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 9.5e-45 184.1 141 66.7
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 9.5e-45 184.1 133 69.2
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 9.5e-45 184.1 136 66.9
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.2e-44 183.7 121 73.6
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 1.2e-44 183.7 141 66.7
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 1.2e-44 183.7 190 55.8
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.6e-44 183.3 121 73.6
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.6e-44 183.3 121 73.6
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.6e-44 183.3 121 73.6
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.6e-44 183.3 121 73.6
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 1.6e-44 183.3 121 73.6
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 2.1e-44 183.0 120 73.3
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 2.8e-44 182.6 118 78.0
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 3.6e-44 182.2 110 80.0
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 4.7e-44 181.8 141 66.7
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 4.7e-44 181.8 141 66.7
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 8.1e-44 181.0 119 75.6
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 8.1e-44 181.0 118 76.3
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 1.1e-43 180.6 116 71.6
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 1.4e-43 180.3 119 75.6
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 1.8e-43 179.9 160 60.6
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 4.0e-43 178.7 119 73.9
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 6.8e-43 177.9 144 67.4
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.0e-42 176.4 107 77.6
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 2.6e-42 176.0 125 75.2
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.3e-41 173.7 114 79.8
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 1.3e-41 173.7 119 72.3
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 1.3e-41 173.7 116 74.1
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 2.2e-41 172.9 116 69.8
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 2.9e-41 172.6 122 71.3
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 8.3e-41 171.0 124 71.8
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 9.2e-40 167.5 114 72.8
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 9.2e-40 167.5 128 69.5
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 1.2e-39 167.2 117 69.2
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 3.9e-38 162.2 95 81.1
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 4.7e-36 155.2 119 67.2
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 6.2e-36 154.8 115 67.0
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 1.8e-35 153.3 136 61.0
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 1.2e-34 150.6 129 57.4
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 1.2e-34 150.6 95 74.7
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 1.5e-34 150.2 88 80.7
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 2.6e-34 149.4 109 62.4
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 8.4e-33 144.4 113 63.7
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 2.4e-32 142.9 108 64.8
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 1.6e-31 140.2 133 54.9
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.6e-31 140.2 91 75.8
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 1.3e-30 137.1 118 56.8
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 2.5e-29 132.9 117 53.8
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 4.8e-20 102.1 118 45.8
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 4.5e-18 95.5 86 57.0
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 5.4e-16 88.6 98 48.0
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.3e-14 84.0 50 76.0
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.3e-09 67.4 61 54.1
Manes.01G158400 Manihot esculenta HOM05D006312 ORTHO05D007843 2.3e-06 56.6 63 55.6
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 3.0e-06 56.2 81 39.5


User provided reference genes

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