Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 8.4e-297 1023.1 576 100.0
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 7.3e-208 727.6 584 70.7
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 1.2e-207 726.9 584 70.4
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 9.0e-182 641.0 571 62.0
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 4.8e-167 592.0 572 60.7
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 2.6e-144 516.5 573 52.4
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 2.6e-120 436.8 585 47.4
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 1.2e-117 427.9 604 43.4
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 2.3e-116 423.7 580 46.2
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 6.6e-116 422.2 582 45.9
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 5.2e-113 412.5 564 45.6
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 8.9e-113 411.8 569 43.8
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 2.9e-111 406.8 568 43.7
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 1.9e-110 404.1 567 43.6
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 9.2e-110 401.7 549 44.8
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 9.2e-110 401.7 560 43.8
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 9.2e-110 401.7 555 43.6
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 1.2e-109 401.4 581 43.4
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 2.0e-109 400.6 582 44.7
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 6.6e-108 395.6 584 45.2
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 2.5e-107 393.7 581 42.2
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 5.6e-107 392.5 567 43.9
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 2.3e-105 387.1 570 41.8
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 1.2e-104 384.8 591 45.9
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 1.2e-104 384.8 550 42.9
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 2.0e-104 384.0 584 42.1
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 2.6e-104 383.6 577 44.2
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 7.5e-104 382.1 592 41.9
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 9.8e-104 381.7 596 40.4
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 2.9e-103 380.2 585 46.8
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 6.4e-103 379.0 556 42.8
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 2.4e-102 377.1 557 45.8
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 4.1e-102 376.3 583 39.6
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 3.5e-101 373.2 552 41.7
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 4.6e-101 372.9 583 42.2
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 7.8e-101 372.1 512 43.4
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 1.3e-100 371.3 563 42.3
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.1e-99 368.2 563 41.6
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 1.1e-99 368.2 552 41.1
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 1.5e-99 367.9 574 39.9
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 4.3e-99 366.3 574 40.1
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 4.3e-99 366.3 584 41.8
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.1e-98 364.0 569 41.3
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 1.8e-97 360.9 575 41.0
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 3.1e-97 360.1 556 41.7
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 5.2e-97 359.4 546 39.4
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 5.2e-97 359.4 583 41.7
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 8.9e-97 358.6 566 38.7
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 8.9e-97 358.6 589 43.6
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 1.2e-96 358.2 566 39.4
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.5e-96 357.8 556 40.5
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 1.5e-96 357.8 583 40.8
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.5e-96 357.8 552 41.5
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 5.8e-96 355.9 572 40.2
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 5.8e-96 355.9 570 38.8
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 5.8e-96 355.9 566 38.5
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 2.2e-95 354.0 563 41.0
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 1.1e-94 351.7 565 40.9
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 4.1e-94 349.7 553 39.2
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 5.4e-94 349.4 601 43.4
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 5.4e-94 349.4 445 49.4
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 7.1e-94 349.0 552 38.6
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 7.1e-94 349.0 548 41.6
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 1.2e-93 348.2 645 37.8
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 1.6e-93 347.8 577 40.0
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 4.6e-93 346.3 553 38.2
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 4.6e-93 346.3 553 38.2
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 4.6e-93 346.3 577 37.4
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 8.6e-92 342.0 508 41.5
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 1.1e-91 341.7 575 38.1
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 2.5e-91 340.5 567 38.8
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 5.6e-91 339.3 561 39.8
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.6e-90 337.8 546 38.6
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 2.8e-90 337.0 567 40.6
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 4.7e-90 336.3 565 38.4
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 6.2e-90 335.9 565 38.4
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 8.1e-90 335.5 544 37.1
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 2.4e-89 334.0 563 39.4
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 5.2e-89 332.8 567 39.5
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 8.9e-89 332.0 542 37.1
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 8.9e-89 332.0 565 38.1
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 8.9e-89 332.0 584 42.0
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 4.4e-88 329.7 578 40.1
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 3.8e-87 326.6 481 46.6
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 1.1e-86 325.1 586 42.5
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 1.4e-86 324.7 473 42.5
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 1.9e-86 324.3 580 39.8
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 3.2e-86 323.6 584 36.8
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 3.2e-86 323.6 566 38.9
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 2.7e-85 320.5 580 39.1
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 6.0e-85 319.3 545 37.6
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 7.8e-85 318.9 544 36.0
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 1.3e-84 318.2 588 38.9
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 2.3e-84 317.4 586 36.9
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 3.0e-84 317.0 580 39.1
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 8.7e-84 315.5 564 38.1
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 5.6e-83 312.8 563 34.5
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 3.6e-82 310.1 577 36.0
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 3.6e-82 310.1 581 36.3
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 1.2e-80 305.1 543 35.7
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 1.5e-80 304.7 573 36.3
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 1.9e-78 297.7 545 34.5
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 1.6e-77 294.7 545 35.0
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 2.1e-77 294.3 597 35.2
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 6.0e-77 292.7 542 34.7
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 8.7e-76 288.9 359 48.7
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 9.6e-75 285.4 583 33.4
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 1.6e-74 284.6 582 33.3
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 2.8e-74 283.9 583 33.4
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 6.2e-74 282.7 386 42.5
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 1.8e-73 281.2 583 33.1
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 1.9e-70 271.2 434 41.2
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 2.4e-70 270.8 557 36.1
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 3.2e-70 270.4 583 32.6
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 3.2e-70 270.4 583 32.6
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 1.3e-68 265.0 473 40.4
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 1.8e-68 264.6 385 43.1
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 6.7e-68 262.7 549 32.6
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 1.5e-67 261.5 479 37.0
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 7.4e-67 259.2 477 36.1
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 7.4e-67 259.2 546 39.0
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 1.6e-66 258.1 241 56.4
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 2.0e-64 251.1 542 31.7
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 2.2e-63 247.7 571 31.9
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 6.2e-58 229.6 244 49.6
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 1.4e-57 228.4 470 34.5
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 1.5e-51 208.4 573 30.2
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 2.8e-50 204.1 449 34.5
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 8.2e-50 202.6 238 45.4
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 3.2e-46 190.7 415 31.1
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.4e-41 174.5 322 37.0
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 8.5e-39 166.0 374 32.4
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.6e-37 161.8 241 37.3
CiPaw.05G040600 Carya illinoinensis HOM05D003578 ORTHO05D004021 5.3e-33 146.7 258 41.9
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 4.5e-32 143.7 362 30.9
Mapoly0042s0088 Marchantia polymorpha HOM05D003578 ORTHO05D004021 7.5e-27 126.3 497 27.0
GSVIVG01023069001 Vitis vinifera HOM05D003578 ORTHO05D004021 9.7e-27 125.9 232 36.6
GSVIVG01023034001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.8e-26 124.4 148 48.0
GSVIVG01023046001 Vitis vinifera HOM05D003578 ORTHO05D004021 6.3e-26 123.2 148 48.0
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 1.6e-24 118.6 158 37.3
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 3.8e-23 114.0 561 23.7
Lj1A1063T36 Lonicera japonica HOM05D003578 ORTHO05D004021 1.5e-22 112.1 166 41.6
Pp3c7_8870 Physcomitrium patens HOM05D003578 ORTHO05D004021 8.0e-21 106.3 537 25.7
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 1.0e-20 105.9 154 40.3
Nn1g00799 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.0e-20 105.9 190 40.0
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 4.0e-20 104.0 117 45.3
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 5.2e-20 103.6 538 24.9
Aqoxy2G02352 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.2e-19 102.4 147 38.1
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 1.5e-19 102.1 567 22.4
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 2.0e-19 101.7 151 37.7
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 2.6e-19 101.3 553 24.4
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 2.4e-17 94.7 105 46.7
Nn1g00803 Nelumbo nucifera HOM05D003578 ORTHO05D004021 7.0e-17 93.2 115 44.3
arahy.Tifrunner.gnm1.ann1.0Y2WZB Arachis hypogaea HOM05D003578 ORTHO05D004021 2.0e-16 91.7 136 36.8
Nn1g08562 Nelumbo nucifera HOM05D003578 ORTHO05D004021 7.7e-16 89.7 110 40.9
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.0e-15 89.4 164 36.0
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 3.8e-15 87.4 104 42.3
GSVIVG01023076001 Vitis vinifera HOM05D003578 ORTHO05D004021 5.0e-15 87.0 95 44.2
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 1.1e-14 85.9 127 38.6
CAN.G1352.18 Capsicum annuum HOM05D003578 ORTHO05D004021 1.4e-12 79.0 158 32.9
CBR_g55876 Chara braunii HOM05D003578 ORTHO05D004021 1.4e-12 79.0 515 22.3
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea HOM05D003578 ORTHO05D004021 6.8e-12 76.6 188 33.0
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 1.5e-11 75.5 66 57.6
Aqoxy2G04053 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.7e-10 72.0 64 60.9
Aqoxy7G03366 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.7e-10 72.0 64 60.9
GSVIVG01023027001 Vitis vinifera HOM05D003578 ORTHO05D004021 3.1e-09 67.8 66 47.0
Zm00001eb322170 Zea mays HOM05D003578 ORTHO05D004021 1.6e-08 65.5 77 39.0
Atru.chr6.1018 Acer truncatum HOM05D003578 ORTHO05D004021 2.0e-08 65.1 67 47.8
GSVIVG01038756001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.0e-07 62.8 72 40.3
ATR0193G025 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.7e-07 62.0 113 30.1
Lsat_1_v5_gn_4_97940 Lactuca sativa HOM05D003523 ORTHO05D004021 1.7e-07 62.0 45 60.0
Nn7g38100 Nelumbo nucifera HOM05D003578 ORTHO05D004021 3.3e-06 57.8 131 37.4


User provided reference genes

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