Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 1.1e-115 419.9 203 100.0
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 2.4e-97 359.0 216 84.7
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 2.8e-93 345.5 203 82.8
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 4.4e-91 338.2 203 81.8
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 2.2e-90 335.9 197 81.2
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 1.8e-89 332.8 203 79.8
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 2.9e-87 325.5 205 78.5
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 2.9e-87 325.5 203 78.3
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 8.6e-87 323.9 203 78.3
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 1.1e-86 323.6 206 76.7
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 1.9e-86 322.8 203 77.8
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 1.9e-86 322.8 206 76.7
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.5e-86 322.4 203 77.8
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 3.3e-86 322.0 203 76.8
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 4.3e-86 321.6 204 78.4
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 5.6e-86 321.2 205 76.6
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 5.6e-86 321.2 203 77.8
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 1.2e-85 320.1 205 76.6
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 2.8e-85 318.9 203 75.4
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 3.6e-85 318.5 203 76.4
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 6.1e-85 317.8 203 75.4
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 8.0e-85 317.4 203 76.8
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 8.0e-85 317.4 209 76.6
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 1.4e-84 316.6 204 77.9
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 1.8e-84 316.2 205 76.6
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 4.4e-83 311.6 206 76.2
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 4.4e-83 311.6 207 76.8
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 5.8e-83 311.2 213 75.1
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 1.7e-82 309.7 204 75.5
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 1.7e-82 309.7 187 78.6
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 3.7e-82 308.5 203 73.9
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 8.3e-82 307.4 186 80.1
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 8.3e-82 307.4 206 75.7
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 1.1e-81 307.0 205 74.6
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 1.1e-81 307.0 205 76.1
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 2.4e-81 305.8 213 71.8
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 4.1e-81 305.1 205 74.1
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 4.1e-81 305.1 175 80.0
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 5.4e-81 304.7 205 75.6
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 5.4e-81 304.7 198 73.7
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 7.0e-81 304.3 205 75.6
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 1.6e-80 303.1 205 75.6
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 1.6e-80 303.1 205 75.6
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 1.6e-80 303.1 205 75.6
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 2.0e-80 302.8 204 71.1
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 2.7e-80 302.4 204 74.0
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 2.7e-80 302.4 203 71.4
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 2.7e-80 302.4 182 79.1
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 6.0e-80 301.2 206 72.8
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 6.0e-80 301.2 215 71.2
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 1.0e-79 300.4 205 73.2
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 1.3e-79 300.1 204 73.5
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 3.0e-79 298.9 203 70.9
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 3.0e-79 298.9 176 81.2
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 5.0e-79 298.1 205 74.1
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 5.0e-79 298.1 204 74.0
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 1.1e-78 297.0 203 70.9
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 1.5e-78 296.6 198 72.7
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 2.5e-78 295.8 203 70.4
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 4.3e-78 295.0 203 69.5
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 4.3e-78 295.0 206 70.4
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 7.3e-78 294.3 164 87.2
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 9.5e-78 293.9 205 72.2
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 9.5e-78 293.9 199 69.8
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 2.1e-77 292.7 204 69.1
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 2.8e-77 292.4 192 74.0
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 4.7e-77 291.6 204 71.1
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 8.1e-77 290.8 204 71.1
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 8.1e-77 290.8 203 70.9
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 1.4e-76 290.0 225 64.4
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 1.4e-76 290.0 203 68.5
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 1.4e-76 290.0 203 68.5
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 2.3e-76 289.3 175 78.3
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 2.3e-76 289.3 204 72.5
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 2.3e-76 289.3 176 80.7
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 4.0e-76 288.5 203 68.5
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 1.2e-75 287.0 192 73.4
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 2.6e-75 285.8 199 68.8
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 1.7e-74 283.1 210 67.6
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 7.1e-73 277.7 174 75.9
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.0e-71 273.9 153 82.4
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 3.6e-69 265.4 181 75.1
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 8.1e-69 264.2 214 64.0
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.8e-68 263.1 178 74.2
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 5.2e-68 261.5 174 75.3
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 1.5e-67 260.0 182 75.3
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 3.4e-67 258.8 167 71.3
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 1.7e-66 256.5 137 86.9
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 1.2e-64 250.4 141 79.4
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 1.0e-63 247.3 159 74.2
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 1.3e-63 246.9 163 68.1
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 1.1e-62 243.8 155 72.9
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 3.1e-60 235.7 167 67.1
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 5.8e-59 231.5 174 62.1
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 7.6e-59 231.1 158 65.2
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 9.9e-59 230.7 152 71.1
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 1.6e-53 213.4 161 67.1
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 1.4e-52 210.3 111 85.6
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 3.9e-47 192.2 170 55.3
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 6.2e-45 184.9 138 65.2
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 4.3e-30 135.6 134 47.8
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 3.0e-15 86.3 165 35.2
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 4.2e-09 65.9 37 75.7
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 2.1e-08 63.5 146 33.6
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 2.0e-06 57.0 131 31.3
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 2.0e-06 57.0 184 24.5


User provided reference genes

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