Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 3.8e-202 708.0 366 100.0
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 3.7e-80 302.8 362 46.7
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 3.8e-77 292.7 202 77.7
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 1.9e-76 290.4 360 46.7
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 1.8e-71 273.9 404 42.8
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 5.4e-63 245.7 381 39.6
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.2e-62 244.6 253 58.5
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 2.0e-62 243.8 352 44.9
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 6.5e-61 238.8 243 54.7
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 9.5e-60 235.0 255 51.4
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 1.0e-58 231.5 370 38.9
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 1.8e-58 230.7 377 36.1
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 6.8e-58 228.8 378 39.2
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 2.0e-57 227.3 271 45.4
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 4.4e-57 226.1 367 39.0
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 2.2e-56 223.8 384 36.7
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 2.2e-56 223.8 381 37.0
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 2.8e-56 223.4 488 34.4
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 4.9e-56 222.6 243 50.6
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 6.3e-56 222.2 396 36.6
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 1.1e-55 221.5 243 49.0
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.1e-55 221.5 243 50.6
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 1.4e-55 221.1 244 51.6
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 1.8e-55 220.7 293 41.0
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 3.1e-55 219.9 241 51.5
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 4.1e-55 219.5 243 50.2
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 5.4e-55 219.2 247 51.4
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 1.6e-54 217.6 243 49.8
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 4.5e-54 216.1 259 48.3
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 7.8e-54 215.3 244 50.0
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 7.8e-54 215.3 244 50.4
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 1.3e-53 214.5 244 50.4
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 1.3e-53 214.5 244 50.4
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 1.3e-53 214.5 243 49.4
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 2.3e-53 213.8 234 50.9
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 2.3e-53 213.8 217 52.1
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 2.3e-53 213.8 224 53.1
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 5.0e-53 212.6 244 50.0
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 6.6e-53 212.2 243 48.6
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 6.6e-53 212.2 271 45.8
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 8.6e-53 211.8 243 51.4
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 1.1e-52 211.5 267 46.1
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 1.9e-52 210.7 243 50.6
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.3e-52 209.9 236 50.0
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 1.6e-51 207.6 241 51.5
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 2.8e-51 206.8 241 49.4
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.6e-51 206.5 243 48.6
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 6.1e-51 205.7 244 48.8
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 6.1e-51 205.7 240 47.5
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 1.8e-50 204.1 243 46.9
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 2.3e-50 203.8 243 48.1
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.3e-50 203.8 348 37.6
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 8.9e-50 201.8 230 49.6
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 1.5e-49 201.1 162 68.5
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 2.6e-49 200.3 243 49.0
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 3.4e-49 199.9 241 47.7
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 5.7e-49 199.1 243 48.1
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 7.5e-49 198.7 241 47.3
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 7.5e-49 198.7 241 48.1
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 2.2e-48 197.2 241 46.9
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 3.7e-48 196.4 241 46.9
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 4.9e-48 196.1 338 37.9
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 4.9e-48 196.1 271 43.2
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 6.4e-48 195.7 243 47.7
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 6.4e-48 195.7 277 42.2
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 8.3e-48 195.3 229 46.7
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 2.7e-46 190.3 241 44.4
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 7.8e-46 188.7 242 45.9
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 1.3e-45 188.0 361 35.7
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 1.3e-45 188.0 244 46.3
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 8.6e-45 185.3 329 38.3
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 1.5e-44 184.5 250 44.8
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 2.5e-44 183.7 242 43.4
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 6.2e-43 179.1 197 53.3
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 6.2e-43 179.1 254 43.3
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 2.3e-42 177.2 214 47.7
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 2.3e-42 177.2 233 45.5
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 8.9e-42 175.3 195 51.3
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 7.5e-41 172.2 205 46.3
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 2.4e-39 167.2 260 37.3
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 1.3e-37 161.4 244 38.5
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 1.7e-37 161.0 188 48.4
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 8.6e-37 158.7 161 52.8
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 4.3e-36 156.4 243 37.4
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 6.8e-34 149.1 173 48.0
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 5.8e-33 146.0 145 53.1
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 7.5e-33 145.6 201 45.3
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 7.3e-28 129.0 107 61.7
Hund03006 Selenicereus undatus HOM05D007522 ORTHO05D009518 1.2e-27 128.3 154 53.2
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 1.6e-22 111.3 264 30.3
Cfa021487 Carpinus fangiana HOM05D000146 ORTHO05D007947 1.3e-21 108.2 250 32.0
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 8.1e-19 99.0 127 40.9
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 9.9e-17 92.0 82 58.5
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 4.3e-12 76.6 123 38.2
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 1.3e-11 75.1 130 35.4
VMungo1309G0092 Vigna mungo HOM05D007522 ORTHO05D009518 1.5e-09 68.2 115 33.0
SMO329G0073 Selaginella moellendorffii HOM05D007522 ORTHO05D009518 7.6e-09 65.9 99 39.4
SEGI_10687 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 8.4e-08 62.4 178 29.8
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 4.2e-07 60.1 87 37.9
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 1.6e-06 58.2 60 46.7


User provided reference genes

Program Settings