Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 3.1e-207 724.9 372 100.0
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 3.7e-144 515.4 364 75.0
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 8.6e-77 291.6 436 44.7
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 3.4e-73 279.6 355 50.7
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 3.2e-71 273.1 423 44.4
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 4.6e-70 269.2 358 48.3
Ah.10g025860 Amaranthus hybridus HOM05D005141 ORTHO05D006250 3.9e-69 266.2 210 66.7
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 8.7e-69 265.0 353 49.6
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 1.5e-68 264.2 359 47.9
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 1.9e-68 263.8 359 48.5
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 7.3e-68 261.9 379 45.4
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 7.3e-68 261.9 361 49.6
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 1.3e-67 261.2 323 50.5
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 1.6e-67 260.8 359 49.3
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 4.8e-67 259.2 359 48.5
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 6.2e-67 258.8 357 46.5
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 1.1e-66 258.1 357 46.5
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 2.4e-66 256.9 356 47.2
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 1.2e-65 254.6 379 45.1
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 2.6e-65 253.4 353 46.2
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 5.8e-65 252.3 359 46.5
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 5.8e-65 252.3 357 47.1
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 7.6e-65 251.9 364 48.1
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 9.9e-65 251.5 359 46.8
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 2.2e-64 250.4 353 47.0
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 3.8e-64 249.6 404 43.8
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 4.9e-64 249.2 359 46.8
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 6.4e-64 248.8 352 46.9
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 5.4e-63 245.7 355 44.8
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 5.4e-63 245.7 359 46.5
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 7.1e-63 245.4 356 46.3
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 9.3e-63 245.0 352 45.2
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 2.7e-62 243.4 350 46.3
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 6.0e-62 242.3 352 45.2
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 6.0e-62 242.3 377 42.7
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 6.7e-61 238.8 360 45.3
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 6.7e-61 238.8 382 43.7
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 1.5e-60 237.7 351 44.7
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 1.9e-60 237.3 364 46.4
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 2.5e-60 236.9 359 44.8
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 1.6e-59 234.2 355 44.2
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 3.7e-59 233.0 352 45.5
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 8.1e-59 231.9 349 44.4
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 1.1e-58 231.5 363 44.6
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 1.1e-58 231.5 356 44.4
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 1.1e-58 231.5 337 48.4
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 1.8e-58 230.7 381 43.8
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 2.4e-58 230.3 352 45.2
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 2.4e-58 230.3 355 46.5
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 5.3e-58 229.2 355 46.8
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 2.6e-57 226.9 355 47.0
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 3.4e-57 226.5 360 46.1
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 9.9e-57 224.9 361 45.2
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 2.2e-56 223.8 352 44.3
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 4.9e-56 222.6 360 44.7
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 6.4e-56 222.2 360 45.3
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 8.4e-56 221.9 333 46.5
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 1.1e-55 221.5 378 42.1
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 4.2e-55 219.5 366 43.4
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 7.1e-55 218.8 294 51.7
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 7.1e-55 218.8 362 40.3
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 9.3e-55 218.4 264 51.5
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 1.0e-53 214.9 383 42.3
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 1.3e-53 214.5 377 40.1
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 1.8e-53 214.2 354 42.9
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 1.8e-53 214.2 358 42.5
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 1.8e-53 214.2 335 45.1
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 5.1e-53 212.6 357 43.1
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 6.7e-53 212.2 301 47.2
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 2.5e-52 210.3 252 52.0
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 1.6e-51 207.6 305 45.2
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 6.2e-51 205.7 307 47.6
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 1.4e-50 204.5 304 47.0
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 1.8e-50 204.1 347 41.8
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 1.8e-50 204.1 389 40.6
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 2.4e-50 203.8 294 47.6
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 4.0e-50 203.0 368 41.6
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 1.2e-49 201.4 292 47.9
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 5.8e-49 199.1 272 47.1
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 5.8e-49 199.1 350 42.6
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 1.0e-48 198.4 292 45.9
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 1.7e-48 197.6 253 51.0
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 1.2e-46 191.4 295 47.1
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 4.6e-46 189.5 377 41.6
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 1.3e-45 188.0 392 38.0
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 1.9e-44 184.1 285 43.9
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 6.3e-43 179.1 404 37.4
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 8.2e-43 178.7 368 39.7
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 2.6e-41 173.7 287 44.3
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 7.6e-41 172.2 336 40.2
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 1.7e-40 171.0 339 40.4
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 1.1e-39 168.3 254 45.7
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 1.1e-39 168.3 250 45.2
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 7.2e-39 165.6 268 43.3
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 1.8e-37 161.0 245 42.4
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 2.3e-37 160.6 268 42.9
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 7.4e-36 155.6 375 35.7
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 1.1e-34 151.8 322 37.6
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 4.5e-33 146.4 348 34.5
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 1.0e-32 145.2 325 36.3
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 1.3e-32 144.8 343 34.4
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 8.5e-32 142.1 327 36.4
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 8.5e-32 142.1 284 38.7
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 2.5e-31 140.6 273 40.3
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 1.2e-30 138.3 327 36.1
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 2.1e-30 137.5 271 36.9
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 3.6e-30 136.7 271 36.5
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 6.1e-30 136.0 308 37.3
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 7.9e-30 135.6 270 38.1
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 1.4e-29 134.8 329 34.7
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 8.8e-29 132.1 329 33.7
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 3.3e-28 130.2 274 38.0
Glyma.17G205200 Glycine max HOM05D005141 ORTHO05D006250 2.4e-26 124.0 192 46.4
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 1.5e-25 121.3 278 35.3
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 4.5e-25 119.8 269 33.8
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 2.2e-24 117.5 278 33.8
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 8.5e-24 115.5 271 35.1
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 5.5e-23 112.8 269 34.6
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 1.2e-22 111.7 278 33.5
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 2.7e-22 110.5 305 33.8
Aqoxy7G01897 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 1.4e-21 108.2 211 40.8
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 2.3e-21 107.5 323 31.9
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 1.3e-19 101.7 261 34.9
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 6.3e-19 99.4 192 39.1
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 8.2e-19 99.0 278 33.8
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 2.4e-18 97.4 298 31.5
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 3.1e-18 97.1 256 33.2
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 5.9e-17 92.8 124 43.5
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 2.5e-15 87.4 256 32.8
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 4.2e-15 86.7 118 45.8
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 4.0e-13 80.1 189 36.5
BcaC08g44885 Brassica carinata HOM05D005141 ORTHO05D006250 1.3e-11 75.1 196 34.2
A06p26660 Brassica napus HOM05D005141 ORTHO05D006250 2.4e-10 70.9 187 34.2
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 3.1e-10 70.5 132 37.1
C06p25010 Brassica napus HOM05D000698 ORTHO05D006250 4.1e-10 70.1 186 33.3
Haze_10527 Corylus avellana HOM05D005141 ORTHO05D006250 1.3e-08 65.1 99 40.4
Cpa.g.sc91.24 Carica papaya HOM05D005141 ORTHO05D006250 1.9e-07 61.2 103 35.0


User provided reference genes

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