Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 0.0e+00 1075.1 525 100.0
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 4.1e-266 921.0 523 83.9
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 9.5e-263 909.8 523 83.4
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 5.4e-234 814.3 460 83.7
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 9.2e-234 813.5 509 76.4
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 6.0e-233 810.8 518 75.1
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 6.8e-229 797.3 506 74.7
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 1.7e-227 792.7 515 73.6
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 2.2e-227 792.3 512 73.4
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 1.3e-224 783.1 520 72.1
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 1.7e-224 782.7 518 73.4
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 3.0e-224 781.9 520 71.9
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 8.7e-224 780.4 515 73.0
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 1.1e-223 780.0 518 72.6
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 2.8e-222 775.4 516 71.5
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 2.8e-222 775.4 512 72.5
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 1.1e-221 773.5 519 71.9
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 1.2e-220 770.0 523 70.2
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 1.2e-220 770.0 499 73.1
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 1.2e-220 770.0 556 67.6
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 7.6e-220 767.3 510 72.2
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 9.9e-220 766.9 518 70.7
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 1.3e-219 766.5 510 71.8
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.4e-218 763.1 498 73.1
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 2.4e-218 762.3 521 71.4
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 3.2e-218 761.9 511 70.1
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 2.1e-217 759.2 520 71.7
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 2.1e-217 759.2 514 71.6
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 2.7e-217 758.8 521 70.2
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 3.5e-217 758.4 515 72.2
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 6.0e-217 757.7 497 72.8
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 7.9e-217 757.3 512 70.9
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.3e-216 756.5 497 73.8
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.5e-215 753.1 517 69.6
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 1.5e-215 753.1 508 69.9
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 1.5e-215 753.1 520 70.4
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 3.3e-215 751.9 512 70.9
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 1.3e-214 750.0 521 71.4
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 2.1e-214 749.2 520 69.0
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 1.8e-213 746.1 520 69.0
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 9.0e-213 743.8 497 72.0
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 1.2e-212 743.4 503 70.2
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.5e-212 743.0 503 72.0
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.0e-212 742.7 503 72.0
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 2.0e-212 742.7 499 71.7
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 2.6e-212 742.3 487 71.9
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 4.5e-212 741.5 509 70.3
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 7.6e-212 740.7 512 70.5
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 2.2e-211 739.2 506 70.0
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 2.2e-211 739.2 504 70.4
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 1.1e-210 736.9 509 69.0
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 2.4e-210 735.7 521 66.8
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 3.2e-210 735.3 514 68.5
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 4.2e-210 734.9 512 69.9
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 4.2e-210 734.9 474 73.2
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 2.1e-209 732.6 493 71.4
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 1.3e-208 729.9 479 71.2
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 1.8e-208 729.6 492 70.1
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 3.9e-208 728.4 486 70.4
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 1.1e-207 726.9 513 69.4
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 3.3e-207 725.3 486 69.5
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 5.6e-207 724.5 510 69.6
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 5.6e-207 724.5 504 69.4
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 2.1e-206 722.6 514 67.9
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.8e-206 722.2 510 69.4
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 3.1e-205 718.8 493 69.4
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 5.3e-205 718.0 478 73.0
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 3.4e-204 715.3 512 67.8
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 4.5e-204 714.9 456 74.1
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.3e-203 713.4 517 67.3
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 6.5e-203 711.1 515 67.4
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 6.5e-203 711.1 494 69.0
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 2.5e-202 709.1 512 67.0
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 3.2e-202 708.8 494 69.2
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.7e-201 705.7 461 71.6
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 2.7e-201 705.7 508 66.7
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 6.3e-198 694.5 522 64.6
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 1.2e-196 690.3 470 70.9
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 3.4e-196 688.7 529 63.9
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 6.5e-195 684.5 511 65.0
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 1.9e-194 682.9 518 63.3
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 2.5e-194 682.6 514 63.6
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 3.2e-194 682.2 510 65.1
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 2.1e-193 679.5 491 68.0
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 7.9e-193 677.6 503 65.0
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 6.7e-192 674.5 503 64.6
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 6.7e-192 674.5 503 64.6
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 2.8e-190 669.1 512 63.3
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 3.7e-190 668.7 522 63.6
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 4.1e-189 665.2 500 65.0
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 1.2e-188 663.7 549 60.7
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 1.7e-187 659.8 494 65.0
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 2.1e-185 652.9 557 59.6
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 8.5e-179 630.9 485 61.6
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 2.1e-177 626.3 488 62.3
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 2.3e-168 596.3 512 59.6
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 2.4e-149 533.1 371 70.9
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 1.5e-146 523.9 380 66.3
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 4.4e-143 512.3 377 66.0
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 1.2e-140 504.2 359 66.6
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 4.1e-133 479.2 361 64.8
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.5e-114 417.5 498 48.4
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.3e-107 394.4 305 63.3
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.5e-106 391.0 321 60.1
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 2.4e-96 357.1 261 63.2
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 4.0e-88 329.7 214 67.8
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.3e-73 281.6 177 74.0
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 3.8e-70 270.0 185 68.1
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 1.1e-58 231.9 148 68.9
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 2.0e-58 231.1 150 76.0
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 5.0e-22 110.2 104 56.7
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 4.7e-12 77.0 51 68.6
Ah.12g060990 Amaranthus hybridus HOM05D006934 ORTHO05D008743 2.3e-11 74.7 58 77.6
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 3.1e-11 74.3 78 47.4
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 9.9e-10 69.3 79 45.6
Oeu030220.2 Olea europaea HOM05D006934 ORTHO05D008743 3.9e-06 57.4 44 63.6


User provided reference genes

Program Settings